New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3511702 =	55 (0.890)	3 (0.050)	3/328	NT	5.5%	coding (370/4158 nt)	PP_3108	Rhs‑related protein
	?	AE015451	3511783 =	50 (0.850)					coding (451/4158 nt)	PP_3108	Rhs‑related protein

GCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCT  >  AE015451/3511486‑3511929                                                                                                                                                                                                                         |                                                                                                                                                                                                                                    gacgggttcgaccacataacggctggccacctcaccggcgacgaagccggccgtgaacttcagggcgcaaggcatgacggctttcatgccggcctgggtacccgccttgatcagctgggcgataccgcctgcggcaccggcgatggccatcagcacatccacggtggtgcgcagccactccgggacttcatcgtccacgggcaggtaacggtaggtgccgc                                                                                                                                                                                                                                 >  1:836645‑M1/217‑221 (MQ=255)          aTCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGACAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGAc                                                                                                                                                                                                         <  1:590991/236‑1 (MQ=255)                      ttGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGcca                                                                                                                                                                                              >  2:1046282/1‑235 (MQ=255)                                    cgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGccac                                                                                                                                                                                             >  2:858397/1‑222 (MQ=255)                                    cgGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTc                                                                                                                                                                                       <  1:100973/228‑1 (MQ=255)                                      gagaGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGAc                                                                                                                                                                                                         >  1:33862/1‑208 (MQ=255)                                              aTAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTcgc                                                                                                                                                                                                                                    >  1:577269/1‑173 (MQ=255)                                                      tATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcg                                                                                                                                                             >  1:82966/1‑236 (MQ=255)                                                        tGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcggc                                                                                                                                                           <  1:468823/236‑1 (MQ=255)                                                                tCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGTTTGCTGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGccacca                                                                                                                                                                                           >  2:635441/1‑196 (MQ=255)                                                                   cccTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCggt                                                                                                                                                                                   >  1:266988/1‑201 (MQ=255)                                                                   cccTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGCCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGccacca                                                                                                                                                                                           >  2:278297/1‑193 (MQ=255)                                                                     cTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcggcggcg                                                                                                                                                       <  1:69888/227‑1 (MQ=255)                                                                          ggACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTAc                                                                                                                                         >  1:1117/1‑236 (MQ=255)                                                                                tAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGCCAACGTCATCATcggcgg                                                                                                                                                         >  1:168750/1‑214 (MQ=255)                                                                                                 aaCGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCCAGGGCGACAAGCTGAACTGCGGCCCCACCATTTCCggtggt                                                                                                                                                                                >  2:1063754/1‑174 (MQ=255)                                                                                                      gtTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCt                                                                                                                                                                                                            >  2:809739/1‑141 (MQ=255)                                                                                                      gtTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGt                                                                                                             >  1:883039/1‑236 (MQ=255)                                                                                                      ccgccttgatcagctgggcgataccgcctgcggcaccggcgatggccatcagcacatccacggtggtgcgcagccactccgggacttcatcgtccacgggcaggtaacggtaggtgccgcc                                                                                                                                                                                                                                >  1:149462‑M1/116‑121 (MQ=255)                                                                                                          atcaACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTg                                                                                                            <  2:982985/233‑1 (MQ=255)                                                                                                             caCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgcg                                                                                                      <  2:863521/235‑1 (MQ=255)                                                                                                             aaCAGCCGCAAGGCCGCCCGCGTCGAAAACAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCAGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGt                                                                                                                                 <  1:1035591/209‑1 (MQ=255)                                                                                                             aaCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgc                                                                                                       <  1:606010/235‑1 (MQ=255)                                                                                                              aCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgcg                                                                                                      <  1:537548/235‑1 (MQ=255)                                                                                                              aCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgcg                                                                                                      <  1:444226/235‑1 (MQ=255)                                                                                                                 gCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcg                                                                                                                                                             <  2:793197/177‑1 (MQ=255)                                                                                                                  ccacAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCggt                                                                                                                                                                                   >  2:56639/4‑154 (MQ=255)                                                                                                                             cccgcGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCAT‑‑‑CGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGc                                                                                     <  1:793739/234‑1 (MQ=255)                                                                                                                                gcgTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGtcatc                                                                                                                                                                 >  1:276711/1‑158 (MQ=255)                                                                                                                                gcgTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGtcatc                                                                                                                                                                 <  2:276710/158‑1 (MQ=255)                                                                                                                                gcgTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcggcg                                                                                                                                                          <  1:504572/165‑1 (MQ=255)                                                                                                                                gcgTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcggcg                                                                                                                                                          >  2:504571/1‑165 (MQ=255)                                                                                                                                          aaGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCg                                                                                                                                                                             <  2:722663/136‑1 (MQ=255)                                                                                                                                           aGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTg                                                                                                                                <  2:1051432/180‑1 (MQ=255)                                                                                                                                                     ccTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGc                                                                                                          <  1:50312/192‑1 (MQ=255)                                                                                                                                                           aCAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAggtca                                                         <  1:682138/235‑4 (MQ=255)                                                                                                                                                              atcACCCAGGGCCGGTGCATCTTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCCCAAGGGCGACAAGCTAACCTGCGGCGCCACCAATTCCGGTGGTTCGGACAACGTCATCATcggcggcgg                                                                                                                                                      <  2:429753/137‑1 (MQ=255)                                                                                                                                                                 aCCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGcc                                                  <  2:82966/236‑1 (MQ=255)                                                                                                                                                                    cAGGGCCGGTGCAGATTGCCGAAGGCTCGACCACCGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGc                                                               <  1:26471/220‑1 (MQ=255)                                                                                                                                                                     tggtgcgcagccactccgggacttcatcgtccacgggcaggtaacggtaggtGCCGCCGCGCGGAAGGGCGTCAAGGTGACCTGCAGCGCCACCATTTCCGGTGGTTCgg                                                                                                                                                                            <  2:681249‑M1/58‑1 (MQ=255)                                                                                                                                                                         ccGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTCCCCGTGGACGATGAAGTCCCGGAGTGGCCGCGCACCACCGTGGACGTGCCGATGGCCAt                                                                           >  1:459802/1‑203 (MQ=255)                                                                                                                                                                           gcagccactccgggacttcatcgtccacgggcaggtaacggtaggtGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGacgct                                                                                                                          <  1:740035‑M1/108‑3 (MQ=255)                                                                                                                                                                            gTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGAtgtg                                                                                      <  2:651322/189‑1 (MQ=255)                                                                                                                                                                              gCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATcac                                                                        >  1:863480/1‑199 (MQ=255)                                                                                                                                                                               cAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGCTGTGCTGATGGCCATCGCCGGTGCCg                                                                >  1:360917/1‑208 (MQ=255)                                                                                                                                                                               cAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGccct                                                                           >  1:16034/1‑195 (MQ=255)                                                                                                                                                                               cAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGc                                    >  1:1098914/1‑236 (MQ=255)                                                                                                                                                                                 gATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGtt                                                                                                                                           <  2:641122/131‑1 (MQ=255)                                                                                                                                                                                  aTTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTg                                            <  1:84008/225‑1 (MQ=255)                                                                                                                                                                                    tGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAgg                                                            >  1:745110/1‑207 (MQ=255)                                                                                                                                                                                    tGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAg                                               >  1:1115230/1‑220 (MQ=255)                                                                                                                                                                                    ccgggacttcatcgtccacgggcaggtaacggtaggtGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCg                                                                                              <  1:729168‑M1/136‑1 (MQ=255)                                                                                                                                                                                     gCCGCAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCCGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATcggcggcgg                                                                                                                                                      <  2:400643/116‑1 (MQ=255)                                                                                                                                                                                      ccGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGcc                                                  <  2:556068/215‑1 (MQ=255)                                                                                                                                                                                         caGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCACAAGGGCGACAAGCt                                                                                                                                                                                                            >  2:167949/2‑58 (MQ=255)                                                                                                                                                                                              tCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACg                                                                                                                            <  1:278298/133‑1 (MQ=255)                                                                                                                                                                                                       gTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAATCTGACCTGCGGCGCCACCATTTCCGGTGTTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTgg                                                                                           <  1:11251/157‑1 (MQ=255)                                                                                                                                                                                                               cagcAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATGTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCt                                                                                                         <  2:376982/132‑1 (MQ=255)                                                                                                                                                                                                               caACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCCGCTGATCAAGGCGGGGAccccg                          >  1:353395/1‑212 (MQ=255)                                                                                                                                                                                                               caACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGc    <  1:858398/236‑1 (MQ=255)                                                                                                                                                                                                                  cAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCt  >  1:474251/1‑235 (MQ=255)                                                                                                                                                                                                                     cGTCGCCGCCGCGCGCAAGGGCGACAAGCTGCCCTGCGGCGCCACCCTTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATg                                                                                <  2:168216/154‑1 (MQ=255)                                                                                                                                                                                                                     cGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCgc                                                                                             >  2:92108/1‑140 (MQ=255)                                                                                                                                                                                                                      gTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGcc   >  2:952916/1‑230 (MQ=255)                                                                                                                                                                                                                       tCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGaa               >  1:719414/1‑217 (MQ=255)                                                                                                                                                                                                                         |                                                                                                                                                                                                                                    GCAGCCGGCATCGGGGGCAGCTTGCTGACCGCCGCCGGAGAGGCGATAGGCAGTATGTTCTCGTCCCCCTCAGGGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCT  >  AE015451/3511486‑3511929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.