New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3511702 =	55 (0.890)	3 (0.050)	3/328	NT	5.5%	coding (370/4158 nt)	PP_3108	Rhs‑related protein
	?	AE015451	3511783 =	50 (0.850)					coding (451/4158 nt)	PP_3108	Rhs‑related protein

GGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTG  >  AE015451/3511559‑3511998                                                                                                                                                                                                                                 |                                                                                                                                                                                                                        ggACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTAc                                                                                                                                                                                                              >  1:1117/1‑236 (MQ=255)                             gtTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGt                                                                                                                                                                                  >  1:883039/1‑236 (MQ=255)                                 atcaACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTg                                                                                                                                                                                 <  2:982985/233‑1 (MQ=255)                                    caCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgcg                                                                                                                                                                           <  2:863521/235‑1 (MQ=255)                                    aaCAGCCGCAAGGCCGCCCGCGTCGAAAACAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCAGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGt                                                                                                                                                                                                      <  1:1035591/209‑1 (MQ=255)                                    aaCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgc                                                                                                                                                                            <  1:606010/235‑1 (MQ=255)                                     aCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgcg                                                                                                                                                                           <  1:537548/235‑1 (MQ=255)                                     aCAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgcg                                                                                                                                                                           <  1:444226/235‑1 (MQ=255)                                                    cccgcGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCAT‑‑‑CGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGc                                                                                                                                                          <  1:793739/234‑1 (MQ=255)                                                                  aGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTg                                                                                                                                                                                                     <  2:1051432/180‑1 (MQ=255)                                                                            ccTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGc                                                                                                                                                                               <  1:50312/192‑1 (MQ=255)                                                                                  aCAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAggtca                                                                                                                              <  1:682138/235‑4 (MQ=255)                                                                                        aCCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGcc                                                                                                                       <  2:82966/236‑1 (MQ=255)                                                                                         cggtggtgcgcagccactccgggacttcatcgtccacgggcaggtaacggtaggtgccgccgccgatgatgacgttgtccgaaccaccggaaatggtggcgccgcaggtcagcttgtcgcccttgcgcgcggcggcACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCgg                                                                                                                                                                                     <  1:729168‑M2/37‑1 (MQ=255)                                                                                           cAGGGCCGGTGCAGATTGCCGAAGGCTCGACCACCGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGc                                                                                                                                    <  1:26471/220‑1 (MQ=255)                                                                                                ccGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTCCCCGTGGACGATGAAGTCCCGGAGTGGCCGCGCACCACCGTGGACGTGCCGATGGCCAt                                                                                                                                                >  1:459802/1‑203 (MQ=255)                                                                                                  gcagccactccgggacttcatcgtccacgggcaggtaacggtaggtGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGacgct                                                                                                                                                                                               <  1:740035‑M1/108‑3 (MQ=255)                                                                                                   gTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGAtgtg                                                                                                                                                           <  2:651322/189‑1 (MQ=255)                                                                                                     gCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATcac                                                                                                                                             >  1:863480/1‑199 (MQ=255)                                                                                                      cAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGCTGTGCTGATGGCCATCGCCGGTGCCg                                                                                                                                     >  1:360917/1‑208 (MQ=255)                                                                                                      cAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGccct                                                                                                                                                >  1:16034/1‑195 (MQ=255)                                                                                                      cAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGc                                                                                                         >  1:1098914/1‑236 (MQ=255)                                                                                                        gATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGtt                                                                                                                                                                                                                <  2:641122/131‑1 (MQ=255)                                                                                                         aTTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTg                                                                                                                 <  1:84008/225‑1 (MQ=255)                                                                                                           tGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAgg                                                                                                                                 >  1:745110/1‑207 (MQ=255)                                                                                                           tGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAg                                                                                                                    >  1:1115230/1‑220 (MQ=255)                                                                                                           ccgggacttcatcgtccacgggcaggtaacggtaggtGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCg                                                                                                                                                                   <  1:729168‑M1/136‑1 (MQ=255)                                                                                                             ccGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGcc                                                                                                                       <  2:556068/215‑1 (MQ=255)                                                                                                                     tCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACg                                                                                                                                                                                                 <  1:278298/133‑1 (MQ=255)                                                                                                                     agcgtccacgggcaggtaacggtaggtgccgccgccgatgatgacgttgtccgaaccaccggaaatggtggcgccgcaggtcagcttgtcgcccttgcgcgcggcggcACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTgc                                                                                                                                                                            <  1:740035‑M2/46‑1 (MQ=255)                                                                                                                              gTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAATCTGACCTGCGGCGCCACCATTTCCGGTGTTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTgg                                                                                                                                                                <  1:11251/157‑1 (MQ=255)                                                                                                                                      cagcAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATGTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCt                                                                                                                                                                              <  2:376982/132‑1 (MQ=255)                                                                                                                                      caACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCCGCTGATCAAGGCGGGGAccccg                                                                                               >  1:353395/1‑212 (MQ=255)                                                                                                                                      caACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGc                                                                         <  1:858398/236‑1 (MQ=255)                                                                                                                                         cAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCt                                                                       >  1:474251/1‑235 (MQ=255)                                                                                                                                            cGTCGCCGCCGCGCGCAAGGGCGACAAGCTGCCCTGCGGCGCCACCCTTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATg                                                                                                                                                     <  2:168216/154‑1 (MQ=255)                                                                                                                                            cGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCgc                                                                                                                                                                  >  2:92108/1‑140 (MQ=255)                                                                                                                                             gTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGcc                                                                        >  2:952916/1‑230 (MQ=255)                                                                                                                                              tCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGaa                                                                                    >  1:719414/1‑217 (MQ=255)                                                                                                                                                 CCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGTTAccc                                                                                                 <  2:493654‑M1/201‑1 (MQ=255)                                                                                                                                                         cgcAAGGGCGACAAGCTGACCTGCGGCGCCACCATGTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGcc                                                                 <  1:856774/225‑1 (MQ=255)                                                                                                                                                               ggCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACATGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCAACGCCGGTGACGCAGGCGGTATCGCCCAGCTgc                                                                                                                >  1:1076380/1‑171 (MQ=255)                                                                                                                                                                      aGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTtcgt                                          <  1:981501/235‑1 (MQ=255)                                                                                                                                                                       ccgaaccaccggaaatggtggcgctgcaggtcaccttgacgcccttccgcgcggcggcACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGcacca                                                                                                                                                                      <  2:681249‑M2/52‑1 (MQ=255)                                                                                                                                                                                 ggcgCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                              <  1:809740/236‑1 (MQ=255)                                                                                                                                                                                  gcgcCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAgg                               >  2:976830/1‑234 (MQ=255)                                                                                                                                                                                  gcgcCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                              <  1:976624/235‑1 (MQ=255)                                                                                                                                                                                  gcgcCACCAGTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                              <  1:339287/235‑1 (MQ=255)                                                                                                                                                                                   cgcCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCAGCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGa                                                                                                                >  2:744124/1‑152 (MQ=255)                                                                                                                                                                                      caccaTTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGcc                          <  1:673248/235‑1 (MQ=255)                                                                                                                                                                                               cGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCGACCGTTACCTGCTCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATGAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                              <  2:972047/222‑1 (MQ=255)                                                                                                                                                                                                ggtggtTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGGACCCAg                                                                                               >  1:270755/1‑156 (MQ=255)                                                                                                                                                                                                  tggtTCGGACAACGTCATCATCGGAGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGa                                                                                     <  1:334938/164‑1 (MQ=255)                                                                                                                                                                                                    gtTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGAt                                                                                                               <  2:1069932/136‑1 (MQ=255)                                                                                                                                                                                                     ttCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                              <  2:711776/216‑1 (MQ=255)                                                                                                                                                                                                               gTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTgg             <  2:711146/223‑1 (MQ=255)                                                                                                                                                                                                                     atcGGCTGCGGCACCTCCCGTGACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGt                              <  1:170721/200‑1 (MQ=255)                                                                                                                                                                                                                           ggcggcACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCgg                                                                                                       >  1:149462‑M2/7‑121 (MQ=255)                                                                                                                                                                                                                            gcggcACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCgtc  >  1:836645‑M2/6‑220 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                        GGACGATAACCACTGCCTCACCCAACGTGTTCATCAACAGCCGCAAGGCCGCCCGCGTCGAAAAAAGCATCGGTGCCTGCGACAAGCACCCAGGGCCGGTGCAGATTGCCGAAGGCTCGACCAACGTCTTCATCAACAGCGTCGCCGCCGCGCGCAAGGGCGACAAGCTGACCTGCGGCGCCACCATTTCCGGTGGTTCGGACAACGTCATCATCGGCGGCGGCACCTACCGTTACCTGCCCGTGGACGATGAAGTCCCGGAGTGGCTGCGCACCACCGTGGATGTGCTGATGGCCATCGCCGGTGCCGCAGGCGGTATCGCCCAGCTGATCAAGGCGGGTACCCAGGCCGGCATGAAAGCCGTCATGCCTTGCGCCCTGAAGTTCACGGCCGGCTTCGTCGCCGGTGAGGTGGCCAGCCGTTATGTGGTCGAACCCGTG  >  AE015451/3511559‑3511998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.