New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3710882	37 (0.600)	5 (0.080)	5/328	NT	12.8%	coding (64/534 nt)	paaD	putative subunit of phenylacetate degradation enzyme
	?	AE015451	= 3710901	33 (0.560)					coding (45/534 nt)	paaD	putative subunit of phenylacetate degradation enzyme

GGTCAGCCGGCGCTCCAGCTCTGGCGCGCTGAAGCCGGCCTGTTCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGTCGCGGCGACCTGCTTCAGCCAGGTGGCGCCGACGGTCG  >  AE015451/3710655‑3711116                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                           ggTCAGCCGGCGCTCCAGCTCTGGCGCGCTGAAGCCGGCCTGTTCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCAcgtcgt                                                                                                                                                                                                                                    <  1:521697/236‑1 (MQ=255)       tcagcgcTCCAGCTCTGGCGCGCTGAAGCCGGCCTGTTCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCt                                                                                                                                                                                                                               >  1:548517/4‑235 (MQ=255)         ggCGCTCCAGCTCTGGCGCGCTGAAGCCGGCCTGTTCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCCCGTCGTCGCCTTGc                                                                                                                                                                                                                            >  1:57118/1‑236 (MQ=255)              tCCAGCTCTGGCGCGCTGAAGCCGGCCTGTTCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTgc                                                                                                                                                                                                                       <  1:489941‑M2/236‑3 (MQ=255)                                            tCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGtt                                                                                                                                                                                          <  1:480917/235‑1 (MQ=255)                                                    cTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGc                                                                                                                                                                                                                            >  1:1022465/1‑193 (MQ=255)                                                        cGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCtg                                                                                                                                                                                                                          <  2:751673/191‑1 (MQ=255)                                                        cGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCtg                                                                                                                                                                                                                          >  1:751674/1‑191 (MQ=255)                                                             atCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCgg                                                                                                                                                                          <  2:1087251/234‑1 (MQ=255)                                                                      gATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTgcccgtgcctgggcgg                                                                                                                                                                                                         >  2:882659‑M2/1‑178 (MQ=255)                                                                       aTGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCtt                                                                                                                                                               <  1:723589/235‑1 (MQ=255)                                                                                   gCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGa                                                                                                                                                        >  1:350673/1‑230 (MQ=255)                                                                                             cAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCcag                                                                                                                                        <  1:637235/236‑1 (MQ=255)                                                                                             cAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCca                                                                                                                                         <  1:367716/235‑1 (MQ=255)                                                                                                  tAGGTCGGGGTGACCGCCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTg                                                                                                                                                                                <  1:234515/191‑1 (MQ=255)                                                                                                         gggTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGcccc                                                                                                                             >  1:150897/1‑234 (MQ=255)                                                                                                           gTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGAt                                                                                                                          <  1:445777/236‑1 (MQ=255)                                                                                                                       tgcaggtgGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAgg                                                                                                                                                                                   >  1:1080512/1‑167 (MQ=255)                                                                                                                         caggtgGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCCCCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTc                                                                                                                                              <  1:173451/202‑1 (MQ=255)                                                                                                                           ggtgGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTg                                                                                                                                                                                <  1:931957/166‑1 (MQ=255)                                                                                                                           ggtgGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTg                                                                                                                                                                                >  2:931956/1‑166 (MQ=255)                                                                                                                            ttgGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACGTCAGGGTCCATGCCCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCcagca                                                                                                                                      <  1:992950/206‑1 (MQ=255)                                                                                                                                            tCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTg                                                                                                                                                                                <  2:900586/149‑1 (MQ=255)                                                                                                                                              gACATCGCGCCCGATCCCCAGGTCGACCCCGCGGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTgcccgtgcctgggcggtattgggccaggtcatggaccctgaagtgccggtggtcagcgtg                                                                                                                                                             >  1:119534‑M2/1‑106 (MQ=255)                                                                                                                                               ccATCGCGCACGATCCCCAGGTCGACAACGCTGACCCCCGGCACTTCAGGGTCCATGCCCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTgcg                                                                                                                                                                                                                <  2:109272/113‑1 (MQ=255)                                                                                                                                                        aCGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTgcccgtgcctgggcggtattgg                                                                                                                                                                                                   >  2:628385‑M2/1‑96 (MQ=255)                                                                                                                                                         cGATCCCCAGGTCGACCACGCTGACCCCCGGCCCTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCgg                                                                                                                                                                          <  2:330070/142‑1 (MQ=255)                                                                                                                                                                    tCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGc                                                                                                                        <  1:1094892/181‑1 (MQ=255)                                                                                                                                                                         cACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCacagcaaggcgacgacgtggcccgtgcctgggcggtattgggccaggtcatggaccctgaagtgccggtggtccgcggggtcgacctggggatcgggcgcgatgtc                                                                                                                                  >  1:119534‑M1/1‑60 (MQ=255)                                                                                                                                                                         cACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGc                                                                  >  2:994270/1‑230 (MQ=255)                                                                                                                                                                         cACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGAAGAAGTGGCTggcg                                                                           >  1:251452/1‑221 (MQ=255)                                                                                                                                                                          aCGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCacagcaaggcgacgacgtggcccgtgcctgggcggtattgggccaggtc                                                                                                                                                                                           >  2:878596‑M1/1‑59 (MQ=255)                                                                                                                                                                            gCTGACCCCCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGc                                                                                                                        <  1:145101/173‑1 (MQ=255)                                                                                                                                                                             cTGACCACAGGCACTTCAGGGACCATGACCTGGCCTAATACCCCCCATGCACGGGCCACGTCGTCGCCTTGCTGTgcccgt                                                                                                                                                                                                                   >  2:922636‑M2/1‑75 (MQ=255)                                                                                                                                                                                                  tCCATGCCCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGcc                                                                                                 <  1:281085/174‑1 (MQ=255)                                                                                                                                                                                                    cctGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGt                                                                                                                                                                                           <  2:145948/80‑1 (MQ=255)                                                                                                                                                                                                       gACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTgcccgtgcctgggcggtattgggccaggtcatggaccctgaagtgccggtggtcagcgt                                                                                                                                                              >  2:878596‑M2/1‑49 (MQ=255)                                                                                                                                                                                                        aCCTGGCCCAATACCGCCCAGGCACGGGCacagcaaggcgacgacgtggcccgtgcctgggcgg                                                                                                                                                                                                         >  1:288469‑M1/1‑29 (MQ=255)                                                                                                                                                                                                        aCCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGCAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGt                                        >  1:41585/1‑225 (MQ=255)                                                                                                                                                                                                               ccAATACCGCCCAGGCACGGGCacagcaaggcgacgacgtggcccgtgcctgggcggtattgggccaggtcatggaccctgaagtgccggtggtcagcgtggtcgacctggggatcgt                                                                                                                                            >  2:628385‑M1/1‑22 (MQ=255)                                                                                                                                                                                                               ccAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAgg                                                                                                            >  2:281084/1‑150 (MQ=255)                                                                                                                                                                                                                     ccGCCCAGGCACGGGCacagcaaggcgacgacgtggcccgtgcctgggcggtattgggccaggtcatggaccctgaagtgccggtggtcagcgtggtcgacctggggatcgtgcgcgatgtcgattggcgcgccggccacctgcacctggtggtcaccccgacctactctggctgcccggccaccgaagtcatc                                                          >  2:882659‑M1/1‑16 (MQ=255)                                                                                                                                                                                                                     ccGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTgcccgtgcctgggcggtattgggccaggt                                                                                                                                                                                            >  1:288469‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                      cGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGCTCGACCGAAGCAAACGGCGCGGCGACCTGCTTCAGCCAGGTg               >  1:259692/1‑236 (MQ=255)                                                                                                                                                                                                                          cAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCGGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGTCGCGGCGACCTGCTTCAGCCAGGTGgcgc           >  1:574047/1‑236 (MQ=255)                                                                                                                                                                                                                          cAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGt                                                                                         >  2:876266/1‑158 (MQ=255)                                                                                                                                                                                                                          cAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGTcgc                                     >  2:1015144/1‑210 (MQ=255)                                                                                                                                                                                                                          cAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGTCGCGGCGACCTGCTTCa                       >  1:994726/1‑224 (MQ=255)                                                                                                                                                                                                                          cAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCAGTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCGGGTAGAAGTGGCTGGCGGCCTTGGGCa                                                                 >  1:1115042/1‑182 (MQ=255)                                                                                                                                                                                                                               ttgggCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGTCGCGGCGACCTGCTTCAGCCAGGTGGCGCCGACg      >  1:1053926/3‑236 (MQ=255)                                                                                                                                                                                                                               aCGGGCacagcaaggcgacgacgtggcccgtgcatggggggtattaggccaggtcatggtccctgaagtgcctgtggtcag                                                                                                                                                                 >  2:922636‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                   gCacagcaaggcgacgacgtggcccgtgcctgggcggtattgggccaggtcatggaccctgaagtgccggtggtcagcgtggtcgacctggggatcgtgcgcgatgtcgattggcgcgccggccacctgcacctggtggtcaccccgacctactctggctgcccggccaccgaagtcatcgaaggggatatccgccaggcgctggaacaggccggcttcagcgcgccagagctgga  <  1:489941‑M1/236‑235 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                           GGTCAGCCGGCGCTCCAGCTCTGGCGCGCTGAAGCCGGCCTGTTCCAGCGCCTGGCGGATATCCCCTTCGATGACTTCGGTGGCCGGGCAGCCAGAGTAGGTCGGGGTGACCACCAGGTGCAGGTGGCCGGCGCGCCAATCGACATCGCGCACGATCCCCAGGTCGACCACGCTGACCACCGGCACTTCAGGGTCCATGACCTGGCCCAATACCGCCCAGGCACGGGCCACGTCGTCGCCTTGCTGTGCCCGTGCGCCGCGGTCGCCGGCAATCAGTTCACCAGGTTGCATCGGGGTAGGCCCTTGGCAGGAACTGCATTTCGGCCAGCAGCAGGCCCAGATGCTCGGTGTGCAGGCCTTTGCGGCCATCCAGGTAGAAGTGGCTGGCGGCCTTGGGCAGCGGCAGTTCGACCGAAGCAAACGTCGCGGCGACCTGCTTCAGCCAGGTGGCGCCGACGGTCG  >  AE015451/3710655‑3711116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.