New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4913718	38 (0.610)	4 (0.070)	4/324	NT	9.3%	coding (981/1989 nt)	ccmF	holocytochrome c synthetase
	?	AE015451	= 4913758	42 (0.720)					coding (941/1989 nt)	ccmF	holocytochrome c synthetase

TCAGTGGCAGGAACAAGGCGTCGAAATAGGGCGGGCCGACCGACAGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCACCG  >  AE015451/4913489‑4913953                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            tCAGTGGCAGGAACAAGGCGTCGAAATAGGGCGGGCCGACCGACAGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAAc                                                                                                                                                                                                                                       <  1:408141/236‑1 (MQ=255)                          aTAGGGCGGGCCGACCGACAGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAAc                                                                                                                                                                                                                                       <  2:717382/211‑1 (MQ=255)                                    ccgcccgaCAGCTTGGCCCCGGTCAGGGCATCGAGCCCCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCCGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGg                                                                                                                                                                                                    >  1:306163‑M2/1‑235 (MQ=255)                                         cgacAGCTTGGCCCCGGTCGAGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGaaaaa                                                                                                                                                                                                                            <  2:616941/207‑1 (MQ=255)                                             aGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcg                                                                                                                                                                                             >  1:955914‑M2/1‑226 (MQ=255)                                                       cGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGc                                                                                                                                                                                 <  1:670903/236‑1 (MQ=255)                                                              ggCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGaa                                                                                                                                                                                                                               <  1:451169/183‑1 (MQ=255)                                                                  tCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGaaa                                                                                                                                                                                                                              <  2:834247/180‑1 (MQ=255)                                                                                   cAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGt                                                                                                                                                                         <  2:534069/216‑1 (MQ=255)                                                                                    aGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCAc                                                                                                                                                       >  1:334273/1‑233 (MQ=255)                                                                                       gTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGGGAGCGAGCCGCCGCCCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGCCGGCGGCAAAc                                                                                                                                                                                       >  1:335099/1‑198 (MQ=255)                                                                                          ccGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTGTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccct                                                                                                                                                                       >  2:698111‑M2/1‑181 (MQ=255)                                                                                              gCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAGCGCGTGCACCGAGGACAGCACTCCGGAACGCACCAGGAAGGTAccc                                                                                                                                          >  1:223066/1‑236 (MQ=255)                                                                                              gCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGACGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTAc                                                                                                                                            >  2:966313/1‑234 (MQ=255)                                                                                               cggAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGc                                                                                                                                                                                 <  2:978929/194‑1 (MQ=255)                                                                                                   atcatcGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGaa                                                                                                                                                                                                                               >  2:43477/1‑146 (MQ=255)                                                                                                        cGAAGCCGCGACCACCAGCACCAGGTTGTTTGCCAGCAGCAGCGTTTCACGCGACAACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGa                                                                                                                                                                            <  1:24571/192‑1 (MQ=255)                                                                                                                                  tgttgGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACa                                                                                                                                                                                                                          >  2:854216/1‑120 (MQ=255)                                                                                                                                  tgttgGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACa                                                                                                                                                                                                                          <  1:854217/120‑1 (MQ=255)                                                                                                                                  tgttgGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCcagca                                                                                                        <  2:969307/234‑1 (MQ=255)                                                                                                                                        ccAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATCCCCCGCGACGggtcggcggctcgct                                                                                                                                                                                      >  1:166155‑M2/1‑135 (MQ=255)                                                                                                                                          agcagcagcGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCa                                                                                              <  1:907781/236‑1 (MQ=255)                                                                                                                                              gcagcGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGAGGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGGCAGCACTCCGGAACGCACCAGGAAg                                                                                                                                                >  2:27748/1‑182 (MQ=255)                                                                                                                                                      tCACGCGACCACAGGGCGAAACCGACCTTGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAACAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCg                                                                                                                                                               <  2:866483/159‑1 (MQ=255)                                                                                                                                                            gACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGACAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCa                                                                                                                                                                       <  2:336982/145‑1 (MQ=255)                                                                                                                                                            gACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCg                                                                                                                                                               <  1:879253/153‑1 (MQ=255)                                                                                                                                                            gACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCg                                                                                                                     >  1:200509/1‑195 (MQ=255)                                                                                                                                                               cacaGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGttt                                                                         >  1:323584/1‑236 (MQ=255)                                                                                                                                                                acaGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCcgtcgcggggtattttcatcctgtttttcctgctgttcgtggtcggcggctcgc                                                                                                                                                                                       >  2:486473‑M1/1‑71 (MQ=255)                                                                                                                                                                          aCCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCg                                                              <  1:587675/236‑1 (MQ=255)                                                                                                                                                                           ccGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGc                                                             >  1:376586/1‑236 (MQ=255)                                                                                                                                                                            cGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCa                                                                                                                                >  2:985693/1‑168 (MQ=255)                                                                                                                                                                            cGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGgtt                                                                         >  2:955127/1‑223 (MQ=255)                                                                                                                                                                                cTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGc                                                         <  1:578933/235‑1 (MQ=255)                                                                                                                                                                                   gCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtg                                                                                                                                                          >  2:474081‑M2/1‑92 (MQ=255)                                                                                                                                                                                          accaccGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCACGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCa                                               <  1:625477/235‑1 (MQ=255)                                                                                                                                                                                           ccaccGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCa                                               >  2:675145/1‑234 (MQ=255)                                                                                                                                                                                            caccGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCcgtcgcggggtattttcatcctgtttttcctgctgttcgtggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagc                                                                                                                                                 >  2:474081‑M1/1‑43 (MQ=255)                                                                                                                                                                                                  tGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCcgtcgcggggtattttcatcctgtgtttcctgctgttcgtggtcggcggctcgctcaccctgttcgccctgc                                                                                                                                                                     >  2:1049308‑M1/1‑37 (MQ=255)                                                                                                                                                                                                    cgcgcAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAgg                                                                                                                                    >  2:887190/1‑140 (MQ=255)                                                                                                                                                                                                       gcAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAACACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccctgcgcgca                                                                                                                                                                >  2:1049308‑M2/1‑72 (MQ=255)                                                                                                                                                                                                         aGGGCGAACAGGGTGAGCGAGCCGCCGACCcgtcgcggggtattttcatcctgtttttcctgctgttcgtggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagccaggtcggtttcgccctgtggtcgcgtgacacgctgctgctggccaacaacctggtgctggtggtcgcggcttcgatgattctgctcgg                                                        >  2:698111‑M1/1‑30 (MQ=255)                                                                                                                                                                                                           ggCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACgg                                                                                                  <  1:819974/167‑1 (MQ=255)                                                                                                                                                                                                            gCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCACTTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCcca                                   >  1:892555/1‑229 (MQ=255)                                                                                                                                                                                                              gAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGt                                        >  2:491769/1‑222 (MQ=255)                                                                                                                                                                                                                        agcgagcCGCCGACCcgtcgcgggggattttcatcctgtttttcctgctgttcgtggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagccaggtcggtttcgccctgtggtcgcgtgaaacgctgctgctgg                                                                                                      >  1:166155‑M1/1‑15 (MQ=255)                                                                                                                                                                                                                        agcgagcCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                <  2:944504/220‑1 (MQ=255)                                                                                                                                                                                                                        agcgagcCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                >  1:944505/1‑220 (MQ=255)                                                                                                                                                                                                                         gcgagcCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagccaggtcggtttcgccctgt                                                                                                                              >  2:486473‑M2/1‑54 (MQ=255)                                                                                                                                                                                                                               cgccgACCcgtcgcggggtattttcatcctgtttttcctgctgttcgtggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagccaggtcggtttcgccctgtggtcgcgtgaaacgctgctgctggccaacaacctggtgctggtggtcgcggcttcgatgattctgctcggtaccctgtacccattggtgctcgatgccctgaccggggccaagct           >  1:955914‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                               cgccgACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGACTGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTtct                                                                       >  2:906035/1‑174 (MQ=255)                                                                                                                                                                                                                                    aCCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                <  1:834385/208‑1 (MQ=255)                                                                                                                                                                                                                                     ccACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCAc    <  1:326486/235‑1 (MQ=255)                                                                                                                                                                                                                                      ccgtcgcggggtattttcatcctgtttttcctgctgttcgtggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagccaggtcggtttcgccctgtggtcgcgtgaaacgctgcggctggccaacaacctggtgctggtggtcgcggcttcgatgattctgctcggtaccctgtacccattggggctcgatgccctgaccggggccaagctgtcgggcgg  >  1:306163‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            TCAGTGGCAGGAACAAGGCGTCGAAATAGGGCGGGCCGACCGACAGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCACCG  >  AE015451/4913489‑4913953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.