New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4913718	38 (0.610)	4 (0.070)	4/324	NT	9.3%	coding (981/1989 nt)	ccmF	holocytochrome c synthetase
	?	AE015451	= 4913758	42 (0.720)					coding (941/1989 nt)	ccmF	holocytochrome c synthetase

CCGACCGACAGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCACCGGGTCCCAGAACCACCAGCCACCC  >  AE015451/4913524‑4913976                                                                                                                                                                                                                                           |                                                                                                                                                                                                                           ccgcccgaCAGCTTGGCCCCGGTCAGGGCATCGAGCCCCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCCGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGg                                                                                                                                                                                                                           >  1:306163‑M2/1‑235 (MQ=255)          aGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcg                                                                                                                                                                                                                    >  1:955914‑M2/1‑226 (MQ=255)                    cGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGc                                                                                                                                                                                                        <  1:670903/236‑1 (MQ=255)                                                cAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGt                                                                                                                                                                                                <  2:534069/216‑1 (MQ=255)                                                 aGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCAc                                                                                                                                                                              >  1:334273/1‑233 (MQ=255)                                                    gTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGGGAGCGAGCCGCCGCCCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGCCGGCGGCAAAc                                                                                                                                                                                                              >  1:335099/1‑198 (MQ=255)                                                       ccGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTGTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccct                                                                                                                                                                                              >  2:698111‑M2/1‑181 (MQ=255)                                                           gCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAGCGCGTGCACCGAGGACAGCACTCCGGAACGCACCAGGAAGGTAccc                                                                                                                                                                 >  1:223066/1‑236 (MQ=255)                                                           gCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGACGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTAc                                                                                                                                                                   >  2:966313/1‑234 (MQ=255)                                                            cggAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGc                                                                                                                                                                                                        <  2:978929/194‑1 (MQ=255)                                                                     cGAAGCCGCGACCACCAGCACCAGGTTGTTTGCCAGCAGCAGCGTTTCACGCGACAACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGa                                                                                                                                                                                                   <  1:24571/192‑1 (MQ=255)                                                                                               tgttgGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCcagca                                                                                                                               <  2:969307/234‑1 (MQ=255)                                                                                                     ccAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATCCCCCGCGACGggtcggcggctcgct                                                                                                                                                                                                             >  1:166155‑M2/1‑135 (MQ=255)                                                                                                       agcagcagcGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCa                                                                                                                     <  1:907781/236‑1 (MQ=255)                                                                                                           gcagcGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGAGGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGGCAGCACTCCGGAACGCACCAGGAAg                                                                                                                                                                       >  2:27748/1‑182 (MQ=255)                                                                                                                   tCACGCGACCACAGGGCGAAACCGACCTTGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAACAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCg                                                                                                                                                                                      <  2:866483/159‑1 (MQ=255)                                                                                                                         gACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGACAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCa                                                                                                                                                                                              <  2:336982/145‑1 (MQ=255)                                                                                                                         gACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCg                                                                                                                                                                                      <  1:879253/153‑1 (MQ=255)                                                                                                                         gACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCg                                                                                                                                            >  1:200509/1‑195 (MQ=255)                                                                                                                            cacaGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGttt                                                                                                >  1:323584/1‑236 (MQ=255)                                                                                                                                       aCCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCg                                                                                     <  1:587675/236‑1 (MQ=255)                                                                                                                                        ccGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGc                                                                                    >  1:376586/1‑236 (MQ=255)                                                                                                                                         cGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCa                                                                                                                                                       >  2:985693/1‑168 (MQ=255)                                                                                                                                         cGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGgtt                                                                                                >  2:955127/1‑223 (MQ=255)                                                                                                                                             cTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGc                                                                                <  1:578933/235‑1 (MQ=255)                                                                                                                                                gCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtg                                                                                                                                                                                 >  2:474081‑M2/1‑92 (MQ=255)                                                                                                                                                       accaccGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCACGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCa                                                                      <  1:625477/235‑1 (MQ=255)                                                                                                                                                        ccaccGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCa                                                                      >  2:675145/1‑234 (MQ=255)                                                                                                                                                                 cgcgcAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAgg                                                                                                                                                           >  2:887190/1‑140 (MQ=255)                                                                                                                                                                    gcAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAACACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccctgcgcgca                                                                                                                                                                                       >  2:1049308‑M2/1‑72 (MQ=255)                                                                                                                                                                        ggCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACgg                                                                                                                         <  1:819974/167‑1 (MQ=255)                                                                                                                                                                         gCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCACTTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCcca                                                          >  1:892555/1‑229 (MQ=255)                                                                                                                                                                           gAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGt                                                               >  2:491769/1‑222 (MQ=255)                                                                                                                                                                                     agcgagcCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                                       >  1:944505/1‑220 (MQ=255)                                                                                                                                                                                     agcgagcCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                                       <  2:944504/220‑1 (MQ=255)                                                                                                                                                                                      gcgagcCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGggtcggcggctcgctcaccctgttcgccctgcgcgcaccggtggtcaagagccaggtcggtttcgccctgt                                                                                                                                                     >  2:486473‑M2/1‑54 (MQ=255)                                                                                                                                                                                            cgccgACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGACTGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTtct                                                                                              >  2:906035/1‑174 (MQ=255)                                                                                                                                                                                                 aCCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                                       <  1:834385/208‑1 (MQ=255)                                                                                                                                                                                                  ccACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCAc                           <  1:326486/235‑1 (MQ=255)                                                                                                                                                                                                        aCAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCACCGGGTcc                    <  1:26637/236‑1 (MQ=255)                                                                                                                                                                                                         gagcagGAAAAACAGGGTGAAGAGACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCg                                                                                                                                                                                      <  2:37048/72‑1 (MQ=255)                                                                                                                                                                                                                       ggATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGc                                                                  >  1:3774/1‑175 (MQ=255)                                                                                                                                                                                                                       ggATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGc                                                                  <  2:3774/175‑1 (MQ=255)                                                                                                                                                                                                                          tGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCACCGGGTCCCAGAACCACCAGCCAccc  >  1:48162/1‑236 (MQ=255)                                                                                                                                                                                                                           gAAAATACCCCGCGCCGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCccacca                                                       <  1:293719/182‑1 (MQ=255)                                                                                                                                                                                                                                tACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCg                                                                                     <  2:776491/147‑1 (MQ=255)                                                                                                                                                                                                                                   cccGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCca                                                                                                                                                                <  2:352519/69‑1 (MQ=255)                                                                                                                                                                                                                                   cccGCGACGGGTAGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTg                                                                           <  1:106170/154‑1 (MQ=255)                                                                                                                                                                                                                                    ccGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCcagca                                                                                                                               <  2:329211/101‑1 (MQ=255)                                                                                                                                                                                                                                    ccGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAg                                                 <  2:441690/179‑1 (MQ=255)                                                                                                                                                                                                                                       cgACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTAcc                                                                                                                                                                  <  2:259842/63‑1 (MQ=255)                                                                                                                                                                                                                                       cgACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTAcc                                                                                                                                                                  >  1:259843/1‑63 (MQ=255)                                                                                                                                                                                                                                        gACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCcagca                                                                                                                               >  2:914004/1‑97 (MQ=255)                                                                                                                                                                                                                                        gACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCcagca                                                                                                                               <  1:914005/97‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                           CCGACCGACAGCTTGGCCCCGGTCAGGGCATCGAGCACCAATGGGTACAGGGTACCGAGCAGAATCATCGAAGCCGCGACCACCAGCACCAGGTTGTTGGCCAGCAGCAGCGTTTCACGCGACCACAGGGCGAAACCGACCTGGCTCTTGACCACCGGTGCGCGCAGGGCGAACAGGGTGAGCGAGCCGCCGACCACGAACAGCAGGAAAAACAGGATGAAAATACCCCGCGACGGGTCGGCGGCAAACGCGTGCACCGAGGTCAGCACTCCGGAACGCACCAGGAAGGTACCCAGCAGGCTCAGGGAGAATGCGGCAATTGCCAGCAGCACGGTCCAGCTCTTGAACACCCCGCGTTTCTCGGTCACCGCCAGCGAGTGGATCAGTGCGGTGCCCACCAGCCAAGGCATGAACGAGGCGTTTTCCACCGGGTCCCAGAACCACCAGCCACCC  >  AE015451/4913524‑4913976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.