New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2410329	79 (1.110)	5 (0.070)	5/328	NT	6.2%	coding (1119/2742 nt)	acnA‑I	aconitate hydratase 1
	?	AE015451	= 2410381	77 (1.150)					coding (1067/2742 nt)	acnA‑I	aconitate hydratase 1

GTGCATGAGGTGATCGCGGCAATCACCACGGCCCCATCGCGCAGGGTGTGGGTCTGGCCCTGATGGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2410084‑2410329 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggccaggAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATCGAACTGCAGCCCAAACCGCTGGCCAAAGAAGTTGGCCGCCTGGAAAGCGAAGGTGGCGGCGGTGTGGCAGTGGGCAACGCCGACCAGACCGGCGCAG  <  AE015451/2410381‑2410160                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGCATGAGGTGATCGCGGCAATCACCACGGCCCCATCGCGCAGGGTGTGGGTCTGGCCCTGATGGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGG                                                                                                                                                                                                                                          >  1:263227/1‑236     ATGAGGTGATCGCGGCAATCACCACGGCCCCATCGCGCAGGGTGTGGGTCTGGCCCTGATGGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCC                                                                                                                                                                                                                                       >  2:1016607/1‑235               CGCGGCAATCACCACGGCCCCATCGCGCAGGGTGTGGGTCTGGCCCTGATGGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGGAG                                                                                                                                                                                                                              >  2:1087543/1‑234                                                                 GGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGC                                                                                                                                                                               <  1:1099261/231‑1                                                                 GGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGC                                                                                                                                                                               >  2:1099256/1‑231                                                                                                      CACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCC                                                                                                                                                                     <  2:615052/204‑1                                                                                                                                                                           TTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGGAGCCGTCATTCAGCGc                                                                                                                                                                                                                >  1:365733/1‑91                                                                                                                                                                                                                                    CCGTTTGGGCCCGGCCAGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATCGAACTGCAGCCCAAACCGCTGGCCAAAGAAGTTGGCCGCCTGGAAAGCGAA                                                >  2:1038681/1‑195                                                                                                                                                                                                                                         TGGGCCCGGCCAGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATCGAACTGCCGCCCAAACCGCTGGCCAACGAAGTTGGCCGCCTG                                                         >  2:635889/1‑181                                                                                                                                                                                                                                         TGGGCCCGGCCAGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATCGAACTGCAGCCCAAACCGCTGGCCAAAGAAGTTGGCCGCCTGGAAAGCGAAGGTGGCGGCGGTGTGGCAGTGGGCAACGCCGACCAGACCGGCGCAG  >  1:1132409/1‑236                                                                                                                                                                                                                                             CCCGGCCAGGCGCCGTCATTCAGCGCCACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATCGAACTGCAGCCCAAACCGCTGGCCAAAGAAGTTGGCCGCCTGGAAAGCGAAGGTGG                                           <  2:145535/191‑1                                                                                                                                                                                                                                                    AGGAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGGCAGCCAAGCCTTCGACCACTTCATCGAACTGCAGCCCAAACCGCTGGCCAAAGAAGTTGGCCGCCTGGACAGCG                                                  >  2:136125/1‑177                                                                                                                                                                                                                                                      GAGCCGTCACTCGGCGACGCGCTGGCCCTGGACATGGGCGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATC                                                                                                   <  2:419754/126‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGCATGAGGTGATCGCGGCAATCACCACGGCCCCATCGCGCAGGGTGTGGGTCTGGCCCTGATGGCTGTAGTCGACTGCGCCGGTCTGGTCGGCGTTGCCCACTGCCACACCGCCGCCACCTTCGCTTTCCAGGCGGCCAACTTCTTTGGCCAGCGGTTTGGGCTGCAGTTCGATGAAGTGGTCGAAGGCTTGGCTGACCTGGCCCAGCGCTACGCGGTCCTGCGGCCGTTTGGGCCCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2410084‑2410329 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggccaggAGCCGTCATTCAGCGACACGCTGGCCCTGGACATGGACGACGTCGAAGCCAGCCTGGCCGGGCCCAAACGGCCGCAGGACCGCGTAGCGCTGGGCCAGGTCAGCCAAGCCTTCGACCACTTCATCGAACTGCAGCCCAAACCGCTGGCCAAAGAAGTTGGCCGCCTGGAAAGCGAAGGTGGCGGCGGTGTGGCAGTGGGCAACGCCGACCAGACCGGCGCAG  <  AE015451/2410381‑2410160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.