New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2378115 =	44 (0.620)	4 (0.060)	4/334	NT	8.8%	coding (756/999 nt)	cmaX	CmaX protein
	?	AE015451	2378156 =	41 (0.600)					coding (797/999 nt)	cmaX	CmaX protein

GGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGTTGC  >  AE015451/2377884‑2378347                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                         ggaAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGCTCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACgcgctg                                                                                                                                                                                                                                      <  1:433825/236‑1 (MQ=255)                                  cccGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCa                                                                                                                                                                                                     <  1:987347/236‑1 (MQ=255)                                            ccgccggaacagccaccactgccccacggccaaccccagcacgacgatgcaggcgaacaggaagcccaaagggttttccgccccggggatgccgccgacattgatgcccagcagcccggtgacaaagctcatgggcaggaagatgcaggtgatgatgccaaagcggtacatggtgcggttcatccgctcgctg                                                                                                                                                                                                                                      >  1:276070‑M1/189‑193 (MQ=255)                                               aGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGa                                                                                                                                                                                         >  1:530668/1‑235 (MQ=255)                                               aGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGa                                                                                                                                                                                         <  1:598064/235‑1 (MQ=255)                                                gCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGaa                                                                                                                                                                                        <  1:624113/235‑1 (MQ=255)                                                  cTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAAcc                                                                                                                                                                                      <  1:622862/235‑1 (MQ=255)                                                  cTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCCGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAAcc                                                                                                                                                                                      <  1:60588/235‑1 (MQ=255)                                                    gcagcaGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTg                                                                                                                                                                                                                           >  1:824480/1‑196 (MQ=255)                                                     cagcagATCCGCCGCCGGGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAAcc                                                                                                                                                                                      <  2:740122/232‑1 (MQ=255)                                                         agagcagccgccgTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTCCGCGCAGTTGGCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCAt                                                                                                                                                                               <  1:139305/229‑1 (MQ=255)                                                         agATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCAt                                                                                                                                                                               <  1:656108/235‑1 (MQ=255)                                                             ccgccgccgTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGAc                                                                                                                                                                                                               >  1:393926/1‑199 (MQ=255)                                                              cgccgccgTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCg                                                                                                                                                                         >  1:816326/1‑236 (MQ=255)                                                              cgccgccgTGCCGCGGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCagcgagcg                                                                                                                                                                                              <  1:1244654/215‑1 (MQ=255)                                                                 cgccgTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCt                                                                                                                                                                       <  1:652640/235‑1 (MQ=255)                                                                   ccgTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGc                                                                                                                                                                                                                             <  2:783467/179‑1 (MQ=255)                                                                     gTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACgcgctg                                                                                                                                                                                                                                      <  2:634925/168‑1 (MQ=255)                                                                      tGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGca                                                                                                                                                                 <  1:656278/236‑1 (MQ=255)                                                                              gCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCAcc                                                                                                                                                         <  1:1082926/236‑1 (MQ=255)                                                                                ttGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTg                                                                                                                                                       >  1:858968/1‑236 (MQ=255)                                                                                 tGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGAt                                                                                                                                                                                           <  1:58971/199‑1 (MQ=255)                                                                                  gcgcCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCa                                                                                                                                                     <  1:1010758/236‑1 (MQ=255)                                                                                   cgccgcTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGaaa                                                                                                                                                                                                                       >  2:596793/1‑169 (MQ=255)                                                                                       gcTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCACCAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCt                                                                                                                                                  <  1:97077/234‑1 (MQ=255)                                                                                       gcTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGAc                                                                                                                                                                                                               <  2:1040767/173‑1 (MQ=255)                                                                                           tctcGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGcatcat                                                                                                                                                             >  1:1263116/1‑219 (MQ=255)                                                                                           tctcGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGcatcat                                                                                                                                                             <  2:1263111/219‑1 (MQ=255)                                                                                               gCCCCGCAACGGGAAAGCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCagcgagcg                                                                                                                                                                                              <  1:267055/182‑1 (MQ=255)                                                                                                       ccGGGAAATCTACGCGCAGTTGCCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGCCGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCGCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGAt                                                                                                                                                                                           <  2:362518/176‑1 (MQ=255)                                                                                                              aTCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACcggcg                                                                                                                                                                                                          <  2:1003875/155‑1 (MQ=255)                                                                                                              aTCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACcggcg                                                                                                                                                                                                          >  1:1003880/1‑155 (MQ=255)                                                                                                                  gggttttccgccccggggatgccgccgacattgatgcccagcagccaggtgacaaagcgtatgggcaggaagctgcaggtgatggtgccaaggcggtacatggtgcggttcctccgctcgctgcgc                                                                                                                                                                                                                                   >  2:480671‑M1/119‑126 (MQ=255)                                                                                                                        cgTTGTCGCGCAGCAAATGGAGCTGCTTCGCCAAGGCCGACGCCGATTACGGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGcatcat                                                                                                                                                             <  2:311041/189‑1 (MQ=255)                                                                                                                                      aaaTGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGGTCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCAcc                                                                                                                                                         <  2:338571/180‑1 (MQ=255)                                                                                                                                       aaTGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCa                                                                                                                                         >  2:430940/1‑195 (MQ=255)                                                                                                                                                  ttCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATgc                                                                                                                                      >  2:654530/1‑186 (MQ=255)                                                                                                                                                         aTGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAAc                                                                              <  1:174868/236‑1 (MQ=255)                                                                                                                                                            agcccggtgacaaagctcatgggcaggaagatgcaggtgatgatgccaaagcggtacatggtgcggttcatccgctCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCAACATGTACCGCTTTGGCATCATCACCTGAATATTCCTGCCCATGAGCTTTGTCACCggg                                                                                                                        <  1:428197‑M1/115‑1 (MQ=255)                                                                                                                                                                                  gcaggaagatgcaggtgatgatgccaaagcggtacatggtgcggttcatccgctCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAAccc                                                                            <  2:1244764‑M1/159‑1 (MQ=255)                                                                                                                                                                                  aCTCAACAACAGCCTGCTCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCa                                                     <  1:281086/236‑1 (MQ=255)                                                                                                                                                                                  aCTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGc                                                      >  1:232656/1‑235 (MQ=255)                                                                                                                                                                                              ccTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATc                                                                                                                                                   <  1:614061/130‑1 (MQ=255)                                                                                                                                                                                              ccTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATc                                                                                                                                                   >  2:614056/1‑130 (MQ=255)                                                                                                                                                                                               ggtgatgatgccaaagcggtacatggtgcggttcatccgctCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTtgtgc                                                                                                                             <  2:625211‑M1/110‑3 (MQ=255)                                                                                                                                                                                                     cGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCCTGAGCTTTGTCACCTGGCTGCTGGGCATCAATCTcggcgt                                                                                                 >  1:154614/1‑172 (MQ=255)                                                                                                                                                                                                          ccTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTg                              <  1:80504/235‑1 (MQ=255)                                                                                                                                                                                                           cTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTg                              <  1:430945/234‑1 (MQ=255)                                                                                                                                                                                                                           tGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTg                              <  2:232653/218‑1 (MQ=255)                                                                                                                                                                                                                            ggttcatccgctCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGtgcgg                                          <  2:1126692‑M1/193‑3 (MQ=255)                                                                                                                                                                                                                                cgcgAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTg               >  1:332346/1‑228 (MQ=255)                                                                                                                                                                                                                                 gcgAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCAt                                                                                                                                                                               <  1:316121/67‑1 (MQ=255)                                                                                                                                                                                                                                   gAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGtt    <  1:183209/236‑1 (MQ=255)                                                                                                                                                                                                                                   ccgctCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGt     <  1:992187‑M1/230‑1 (MQ=255)                                                                                                                                                                                                                                     aCGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGGGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCt                                                                <  1:834986/174‑1 (MQ=255)                                                                                                                                                                                                                                     aCGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCTTCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGTTGc  <  1:771571/236‑1 (MQ=255)                                                                                                                                                                                                                                     aCGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGTTGc  <  1:85570/236‑1 (MQ=255)                                                                                                                                                                                                                                     aCGCGCGGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGtt    <  1:281737/234‑1 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                         GGAAGAAAAGGTCGAATCCGACGAGCGGTATGCCCCGGAGCAGGGCAGCCTGCAGCAGATCCGCCGCCGTGCCGCTGGCTTGCGCCGCTTTCTCGCCCCGCAACGGGAAATCTACGCGCAGTTGTCGCGCAGCAAATGGAGCTGGTTCGCCAATGCCGACGCCGATTACTGGAATGAACTCAACAACAGCCTGATCCGCTACCTCGAAGAGCTGGAACTGGCCCGCGAACGCGCTGCGCTGGTGCTGGAAAGCGAGGACCGGCGGCGCAGCGAGCGGATGAACCGCACCATGTACCGCTTTGGCATCATCACCTGCATCTTCCTGCCCATGAGCTTTGTCACCGGGCTGCTGGGCATCAATGTCGGCGGCATCCCCGGGGCGGAAAACCCTTTGGGCTTCCTGTTCGCCTGCATCGTCGTGCTGGGGTTGGCCGTGGGGCAGTGGTGGCTGTTCCGGCGGTTGC  >  AE015451/2377884‑2378347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.