New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3475322 =	43 (0.600)	4 (0.060)	4/332	NT	8.9%	coding (1391/2517 nt)	PP_3087	putative excinuclease ABC subunit A
	?	AE015451	3475368 =	41 (0.610)					coding (1345/2517 nt)	PP_3087	putative excinuclease ABC subunit A

TAAAGCAGCCCAACGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCAGAAGACAAGGTCGGGGTGCT  >  AE015451/3475152‑3475602                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           tAAAGCAGCCCAACGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCCGCCAGTcg                                                                                                                                                                                                                         >  1:1134589/1‑236 (MQ=255) tAAAGCAGCCCAACGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTcg                                                                                                                                                                                                                         >  1:698357/1‑236 (MQ=255)  ctgtttggggtggtttacgtactcgacgagccgtcggccggcttgcacccggccgacagtgaagcgctgttcgaagccctgcagcgcctgaaacaggctggcaactcggtgtacgtggtggagcatgacctggacaccatgcgccgcgccgactggctggtggatgtagggcccgctgccggcgaacacggcggcaccatcctctacagcgggccCTACATCCACCAGCCAGTcg                                                                                                                                                                                                                         <  1:1180566‑M2/20‑1 (MQ=255)         cccAACGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTcggcgcggc                                                                                                                                                                                                                  <  1:489638/235‑1 (MQ=255)           cAACGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCa                                                                                                                                                                                                               >  1:885569/1‑236 (MQ=255)                             cAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGc                                                                                                                                                                                              <  1:843420/235‑1 (MQ=255)                                  tATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGgtg                                                                                                                                                                                                          <  1:1077268/218‑1 (MQ=255)                                              tGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCggcgcggcgc                                                                                                                                                                                                                <  2:935728/200‑1 (MQ=255)                                                cgcgTGATGCCTTCAAGCTTCAGCCGGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGt                                                                                                                                                                           <  1:339925/235‑1 (MQ=255)                                                      aTGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCGCCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATg                                                                                                                                                                                                             >  2:1036351/1‑195 (MQ=255)                                                                                  gcagcgcctgaaacaggctggcaactcggtgtacgtggtggagcatgacctggacaccatgcgccgcgccgactggctggtggatgtagggcccgctgccggcgaacacggcggcaccatccgctacagcgggccCTACATCCACCAGCCAGTCGGCGCGGCGCATGgt                                                                                                                                                                                                           <  1:522947‑M2/34‑1 (MQ=255)                                                                                              cgcgTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACt                                                                                                                             >  1:521539/1‑235 (MQ=255)                                                                                                 gtgtGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGaa                                                                                                                                         <  2:891421/220‑1 (MQ=255)                                                                                                   gtgGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGc                                                                                                                       >  1:893098/1‑236 (MQ=255)                                                                                                      gCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTaca                                                                                                                                                                                 <  1:759736/175‑1 (MQ=255)                                                                                                          ctcggtgtacgtggtggagcatgccctggacaccatgcgccgcgccgactggctggtggatgtagggcccgctgccggcgaacacggcggcaccatcctctacagcgggccCTACATCCACCAGCCAGTCGGCGCGGCGCAt                                                                                                                                                                                                              <  1:362477‑M2/31‑1 (MQ=255)                                                                                                           tACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGc                                                                                                                                                                                              <  2:745943/157‑1 (MQ=255)                                                                                                              cGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACCTCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTc                                                                                                                                                             >  1:93100/1‑187 (MQ=255)                                                                                                              cGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAggg                                                                                                                                                >  2:950716/1‑200 (MQ=255)                                                                                                                   cATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTACAGGATGGTGCCGCCGGGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCt                                                                                                                                                                  >  2:829314/1‑177 (MQ=255)                                                                                                                        aaCAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCg                                                                                                                                                                              >  1:1236422/1‑160 (MQ=255)                                                                                                                        aaCAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCgg                                                                                                                    >  1:624121/1‑218 (MQ=255)                                                                                                                        aaCAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACgg                                                                                                  >  1:542533/1‑236 (MQ=255)                                                                                                                        aaCAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACgg                                                                                                  >  1:891061/1‑236 (MQ=255)                                                                                                                                      ggTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGt                                                                                    <  1:652631/236‑1 (MQ=255)                                                                                                                                         accatgcgccgcgccgactggctggtggatgtagGGCCCGCTGTAGCGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGc                                                                                                                                                    <  1:522947‑M1/135‑1 (MQ=255)                                                                                                                                            atgcgccgcgccgactggctggtggatgtagGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGGCATGCTCCACCACGTACACCGAg                                                                                                                                                                            <  1:362477‑M1/111‑1 (MQ=255)                                                                                                                                             gACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAaccac                                                                             >  1:754010/1‑236 (MQ=255)                                                                                                                                               cTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAaccac                                                                             >  2:1072216/1‑234 (MQ=255)                                                                                                                                                       cgactggctggtggatgtagGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAg                                                                    <  1:1180566‑M1/215‑1 (MQ=255)                                                                                                                                                        cccGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAgccggcc                                                                                                       <  1:263294/197‑1 (MQ=255)                                                                                                                                                          cGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGACCAg                                                                                                                                      >  2:75262/1‑166 (MQ=255)                                                                                                                                                           ggCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGc                                                                <  1:444833/235‑1 (MQ=255)                                                                                                                                                           ggCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCAGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAg                                                                                                                                                                                                     <  2:346838/102‑1 (MQ=255)                                                                                                                                                             ccAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGa                                                                                                     >  1:1186560/1‑196 (MQ=255)                                                                                                                                                             ccAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCCCCGTGTTCGCCGGCCGCGGGCCCTACATCCACCAGCCAGTcggcg                                                                                                                                                                                                                      >  2:210373/1‑83 (MQ=255)                                                                                                                                                                ggCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCCGCCAGTCGGCGCGGCGCATGGGGTCCAGGt                                                                                                                                                                                                   >  2:331997/1‑99 (MQ=255)                                                                                                                                                                 gCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAgccggc                                                                                                        >  2:557199/1‑189 (MQ=255)                                                                                                                                                                     gcgggcggCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCt                                                      <  1:703636/235‑1 (MQ=255)                                                                                                                                                                           ggcccgctgccggcgaacacggcggcgccatcctctacagcgggccCTACAGCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTc                                                                                                                                            <  1:1130299‑M2/97‑1 (MQ=255)                                                                                                                                                                                 CTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCCGGCCCTCCATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAgg                                                                                                                                                                                                    >  2:997870‑M1/1‑81 (MQ=255)                                                                                                                                                                                  TGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGGCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACa                                                                                                                                       <  1:328673‑M1/141‑1 (MQ=255)                                                                                                                                                                                          aTGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCa                                                                                                                               >  2:469047/1‑141 (MQ=255)                                                                                                                                                                                               gccgccGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCAc                                                                                                                              >  1:670438/1‑137 (MQ=255)                                                                                                                                                                                               gccgccGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACgg                                                                                                  >  2:925873/1‑165 (MQ=255)                                                                                                                                                                                               gccgccGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACg                                                                                                   >  2:1154488/1‑164 (MQ=255)                                                                                                                                                                                               gccgccGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAg                             >  2:1265754/1‑234 (MQ=255)                                                                                                                                                                                                 cgccgTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTc                          <  1:1036356/235‑1 (MQ=255)                                                                                                                                                                                                       gtTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCaga                    <  2:1180561/235‑1 (MQ=255)                                                                                                                                                                                                          cGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGCCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCcaggcgcaggcg                                   <  1:472846/217‑1 (MQ=255)                                                                                                                                                                                                             cGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACa                                                                     <  2:1018960/180‑1 (MQ=255)                                                                                                                                                                                                             cGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCAGAAGACaa              <  1:1265759/235‑1 (MQ=255)                                                                                                                                                                                                              ggCAGGGGGCCCTACATccac                                                                                                                                                                                                                                   <  2:95632/21‑1 (MQ=255)                                                                                                                                                                                                              ggCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCAGAAGACaa              <  2:885564/234‑1 (MQ=255)                                                                                                                                                                                                                   cgggccCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCcaggcgcagg                                     <  2:893093‑M2/200‑1 (MQ=255)                                                                                                                                                                                                                    gggccCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCagaaga                 >  1:304765‑M2/6‑225 (MQ=255)                                                                                                                                                                                                                        cCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCAGAAGACAAGGTCGGGGTGCt  >  1:940384‑M2/2‑236 (MQ=255)                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           TAAAGCAGCCCAACGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGAACAGCGCTTCACTGTCGGCCGGGTGCAAGCCGGCCGACGGCTCGTCGAGTACGTAAACCACCCCAAACAGCTGCGAATTCAGCTGGGTGGCCAGGCGCAGGCGTTGCAGTTCACCAGAAGACAAGGTCGGGGTGCT  >  AE015451/3475152‑3475602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.