New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2524241 =	39 (0.950)	3 (0.080)	3/318	NT	8.1%	coding (963/1686 nt)	PP_2213	putative acyl‑CoA synthetase
	?	AE015451	2524282 =	31 (0.800)					coding (1004/1686 nt)	PP_2213	putative acyl‑CoA synthetase

GCTCACGGTCAACGGCGAGGATGCCTGGCTGGCCGGCTGGCAGTTCGTTACCTTGCTCGTCCACCACCACGATGCGGTGGCCGGGGATGGCATAGCCGGCAGAACCCAGGTGCACCGGATGCTGCAGGCCATGGTGGTTGCACAGCACCATGCCCAGTTCGGTCTGGCCGTAGTGATCGTGAATGGTCACGCCCAGCTCGTCGGCGAACCAGCGGATCACTTCGGGGTTCAGCGGTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2524482‑2524241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttcgccgACGAGCTGGGCGTGACCATTCACGATCACTACGGCCAGACCGAACTGGGCATGGTGCTGTGCAACCACCATGGCCTGCAGCATCCGGTGCACCTGGGTTCTGCCGGCTATGCCATCCCCGGCCACCGCATCGTGGTGG  >  AE015451/2524282‑2524419                                                                                                                                                                                                                                                                                                                                                                                              GCTCACGGTCAACGGCGAGGATGCCTGGCTGGCCGGCTGGCAGTTCGTTACCTTGCTCGTCCACCACCACGATGCGGTGGCCGGGGATGGCATAGCCGGCAGAACCCAGGTGCACCGGATGCTGCAGGCCATGGTGGTTGCACAGCACCATGCCCAGTTCGGTCTGGCCGTAGTGATCGTGAATGGTCACGCCCAGCTCGTCGGCGAACCAGCGGATCACTTCGGGGTTCAGCG                                                                                                                                                    >  2:326068/1‑234                                                                                          GCATAGCCGGCAGAACCCAGGTGCACCGGATGCTGCAGGCCATGGTGGTTGCACAGCACCATGCCCAGTTCGGTCTGGCCGTAGTGATCGTCAATGGTCACGCCCAGCTCGTCGGCGAACCAGCGGATCACTTCGGGGTTCAGCGGTTCGCCGACGAGCTGGGCGTGACCA                                                                                                                          <  2:507977/171‑1                                                                                                                                                                                                                    GCGGATCACTTCGGGGTTCAGCGGTTCGCCGACGAGCTGGGCGTGACCATTCACGATCACTACGGCC                                                                                                        <  1:320294/67‑1                                                                                                                                                                                                                    GCGGATCACTTCGGGGTTCAGCGGTTCGCCGACGAGCTGGGCGTGACCATTCACGATCACTACGGCC                                                                                                        >  2:320293/1‑67                                                                                                                                                                                                                                                 CGACGAGCTGGGCGTGACCATTCACGATCACTACGGCCAGACCGAACTGGGCATGGTGCTGTGCAACCACCATGGCCTGCAGCATCCGGTGCACCTGGGTTCTGCCGGCTATGCCATCCCCGGCCACCGCATCGTGGTGG  <  2:571359/140‑1                                                                                                                                                                                                                                                                                                                                                                                              GCTCACGGTCAACGGCGAGGATGCCTGGCTGGCCGGCTGGCAGTTCGTTACCTTGCTCGTCCACCACCACGATGCGGTGGCCGGGGATGGCATAGCCGGCAGAACCCAGGTGCACCGGATGCTGCAGGCCATGGTGGTTGCACAGCACCATGCCCAGTTCGGTCTGGCCGTAGTGATCGTGAATGGTCACGCCCAGCTCGTCGGCGAACCAGCGGATCACTTCGGGGTTCAGCGGTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2524482‑2524241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttcgccgACGAGCTGGGCGTGACCATTCACGATCACTACGGCCAGACCGAACTGGGCATGGTGCTGTGCAACCACCATGGCCTGCAGCATCCGGTGCACCTGGGTTCTGCCGGCTATGCCATCCCCGGCCACCGCATCGTGGTGG  >  AE015451/2524282‑2524419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.