New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3441809	23 (0.560)	3 (0.080)	3/322	NT	10.9%	coding (568/3270 nt)	PP_3062	putative Pyocin R2_PP, tail length determination protein
	?	AE015451	= 3441822	27 (0.690)					coding (581/3270 nt)	PP_3062	putative Pyocin R2_PP, tail length determination protein

AAGACACGGGTATGTCACGCAATGACGTAGCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3441774‑3441809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaccAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCAGCCTTGATCGCGATGTCACGGATGATCGCTTGATAGTTCGCGCTGATCATCGTCGGCACAGCAGCGGCGCCCGTAGCCACCACCGCCCTGCCGATATTCGACTTGAGCGATTCCTTGCCCGC  <  AE015451/3441822‑3441593                                                                                                                                                                                                                                                                            AAGACACGGGTATGTCACGCAATGACGTAGCCGACCAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCA                                                                                                                            <  1:724597/144‑1 AAGACACGGGTATGTCACGCAATGACGTAGCCGACCAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCA                                                                                                                            >  2:724596/1‑144           TATGTCACGCAATGACGTAGCCGACCAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCAGCCTTGATCGCGATGTCACGGATGATCGCTTGATAGTTCGCGCTGATCATCGTCGTCACAGCAGCGGCGCCCGTAGCCACCACCGCCCTGCCGATAT                           >  1:716826/1‑231                                CGACCAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCAGCTTTGATCGCGATGTCACGGATGATCGCTTGATAGTTCGCGCTGATCATCGTCGGCACCGCAGCGGCGCCCGTAGCCACCACCGCCCTGCCG                               >  2:148020/1‑206                                 GACCAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCAGCCTTGATCGCGATGTCACGGATGATCGCTTGATAGTTCGCGCTGATCATCGTCGGCACAGCAGCGGCGCCCGTAGCCACCACCGCCCTGCCGATATTCGACTTGAGCGATTCCTTGCCCGC  >  1:321282/1‑234                                                                                                                                                                                                                                                                            AAGACACGGGTATGTCACGCAATGACGTAGCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3441774‑3441809 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaccAGCTGGTTGACCAGGTCGGCTACGTCATTGCGTGACATACCCGTGTCTTTGGCCGTGCCGATCACCGTCCGGGTAAGCTGCTGTTCCTCGGGCTTGTTGGCGATATCAGCCTTGATCGCGATGTCACGGATGATCGCTTGATAGTTCGCGCTGATCATCGTCGGCACAGCAGCGGCGCCCGTAGCCACCACCGCCCTGCCGATATTCGACTTGAGCGATTCCTTGCCCGC  <  AE015451/3441822‑3441593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.