| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 3441809 | 23 (0.560) | 3 (0.080) | 3/322 | NT | 10.9% | coding (568/3270 nt) | PP_3062 | putative Pyocin R2_PP, tail length determination protein |
| ? | AE015451 | = 3441822 | 27 (0.690) | coding (581/3270 nt) | PP_3062 | putative Pyocin R2_PP, tail length determination protein | |||||
GCGGGCAAGGAATCGCTCAAGTCGAATATCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCAGCGACATGGCCAAGTG > AE015451/3441593‑3442044 | gCGGGCAAGGAATCGCTCAAGTCGAATATCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTggtc > 1:321282‑M2/1‑230 (MQ=255) aaGTCGAATATCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCTCCGGCCTGGATCTGGa > 1:180309/1‑236 (MQ=255) gAATATCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACa < 2:381747/233‑1 (MQ=255) aaTATCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACa < 2:423999/232‑1 (MQ=255) atatCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGACGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTggtcggctacgtcattgcgtgacata > 1:716826‑M2/1‑205 (MQ=255) cGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCGGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAAGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTggtcg > 2:148020‑M2/1‑201 (MQ=255) aCGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCg < 1:500815/193‑1 (MQ=255) cgccgcTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCg < 2:383898/188‑1 (MQ=255) tgCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAg < 1:19040/194‑1 (MQ=255) gCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATgcgc > 1:537542/1‑181 (MQ=255) cgATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTgg > 2:518510/1‑141 (MQ=255) cgATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTgg < 1:518511/141‑1 (MQ=255) tGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTggtcggctacgtcattgcgtgacatacccgtgtctt > 2:724596‑M2/1‑108 (MQ=255) tGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTggtcggctacgtcattgcgtgacatacccgtgtctt < 1:724597‑M2/144‑37 (MQ=255) aacaaGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGGTCGCGGTCGGc > 2:97606/1‑168 (MQ=255) acaaGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGAc > 1:352227/1‑236 (MQ=255) aCCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACt > 1:651581/1‑236 (MQ=255) gACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATc < 1:711399/202‑1 (MQ=255) aGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAgg < 2:401963/194‑1 (MQ=255) gggTATGTCACGCAATGACGTAGCCGACCCGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATc < 2:612660/175‑1 (MQ=255) tATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAgg > 2:397517/1‑234 (MQ=255) tATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAg > 1:619395/1‑234 (MQ=255) aCGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCg > 2:548199/1‑233 (MQ=255) cGCAATGACGTAGCCGACCGGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTAGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAgct > 1:464705/1‑177 (MQ=255) aaTGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCa > 1:429896/1‑235 (MQ=255) tGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCAGCg < 1:548200/236‑1 (MQ=255) tAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATc > 1:677061/1‑155 (MQ=255) tAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATc < 2:677060/155‑1 (MQ=255) aCCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCAGCGACATGGCCa > 2:565687/1‑234 (MQ=255) ccTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCa < 1:741543/221‑1 (MQ=255) cTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCAGCGACATGGCCAAGt < 1:336682/235‑1 (MQ=255) ggTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCAGCGACATGGCCAAGTg > 2:323710/1‑234 (MQ=255) aaCCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACt > 2:558671/1‑170 (MQ=255) aaCCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGc > 2:755813/1‑192 (MQ=255) | GCGGGCAAGGAATCGCTCAAGTCGAATATCGGCAGGGCGGTGGTGGCTACGGGCGCCGCTGCTGTGCCGACGATGATCAGCGCGAACTATCAAGCGATCATCCGTGACATCGCGATCAAGGCTGATATCGCCAACAAGCCCGAGGAACAGCAGCTTACCCGGACGGTGATCGGCACGGCCAAAGACACGGGTATGTCACGCAATGACGTAGCCGACCTGGTCAACCAGCTGGTCGGCGCCGGCATGGATCTGGACAAGGCGCTGTCGTATGCGCCGGTCGCGGCCAAGTTCGCGGTCGGCCAAGGCGCCTCGGGCGTCGACACCGCGTCGATGATCCAGGCGTTGGAGCAAAACGCCAAGATCAGCGACCCCAAGGTCATGCAGCAGGCACTGGAGGCCATCGCCTACCAAGGCCAGGCGGGCAGCTTCGAGGCCAGCGACATGGCCAAGTG > AE015451/3441593‑3442044 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |