New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 886151	40 (0.980)	3 (0.080)	3/316	NT	6.9%	coding (2062/2718 nt)	PP_0767	Transcriptional regulator, LuxR family
	?	AE015451	= 886185	43 (1.120)					coding (2096/2718 nt)	PP_0767	Transcriptional regulator, LuxR family

TTTGCGCGCGGGGCTGGGCGAGGCGCGAGCGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGT  >  AE015451/885934‑886371                                                                                                                                                                                                                          |                                                                                                                                                                                                                             tttGCGCGCGGGGCTGGGCGAGGCGCGCGCGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCg                                                                                                                                                                                                                          <  1:176603/222‑1 (MQ=255)       cgcgGGGCTGGGCGAGGCGCGAGCGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACgg                                                                                                                                                                                                                     <  2:637742/221‑1 (MQ=255)        gcgGGGCTGGGCGAGGCGCGAGCGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTc                                                                                                                                                                                                                <  1:27885/225‑1 (MQ=255)           gggCTGGGCGAGGCGCGAGCGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCt                                                                                                                                                                                                  <  1:689349/236‑1 (MQ=255)                              cGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACg                                                                                                                                                                                                                      >  1:743990/1‑197 (MQ=255)                               gTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGAc                                                                                                                                                                                >  1:337247/1‑234 (MQ=255)                                          tCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTCCCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAgc                                                                                                                                                                                             <  1:724629/210‑1 (MQ=255)                                                     aTCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCcggcggc                                                                                                                                                        >  1:575682/1‑236 (MQ=255)                                                        ggTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGa                                                                                                                                                                    >  2:453679/1‑221 (MQ=255)                                                           cATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTg                                                                                                                                                                                                     >  1:245525/1‑185 (MQ=255)                                                               gCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGccg                                                                                                                                                                                              >  1:200532/1‑186 (MQ=255)                                                                      cggcACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATc                                                                                                                                       >  1:478117/4‑236 (MQ=255)                                                                       gCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGGCCGGGCTGCAGCGCCTGGGCCAGAc                                                                                                                                                                                >  2:147629/1‑194 (MQ=255)                                                                        ccACGCTGGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGc                                                                                                                                                                                                                           <  2:34401/150‑1 (MQ=255)                                                                                    gCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGTCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGtt                                                                                                                          <  1:461273/235‑1 (MQ=255)                                                                                                              tttGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCt                                                                                               <  2:575681/236‑1 (MQ=255)                                                                                                              tttGCGGAGCCGGCCGCGGCCGAGCGCTTGATGCACATCTGAGATGTGCCCCCGGTCTTCTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctggg                                                                                                                                                                                      >  1:138069‑M2/1‑143 (MQ=255)                                                                                                                             gaggccgagCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGt                                                                                 >  1:404230/1‑235 (MQ=255)                                                                                                                                 ccgagCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTGCCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcct                                                                                                                                                                                         >  2:156976‑M2/1‑124 (MQ=255)                                                                                                                                             tGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGc                                                                 >  1:725880/1‑235 (MQ=255)                                                                                                                                                          tgtgCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGcgctgcagccaggactccgcgaggtccgtacgcccctggg                                                                                                                                                                                      <  2:270371‑M1/105‑41 (MQ=255)                                                                                                                                                          tgtgCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGcgctgcagccaggactccgcgaggtccgtacgcccctggg                                                                                                                                                                                      >  1:270372‑M1/1‑65 (MQ=255)                                                                                                                                                           gtgCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCt                                                     <  2:478116/233‑1 (MQ=255)                                                                                                                                                               ccccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGc                                                                                        >  2:762021/1‑194 (MQ=255)                                                                                                                                                               ccccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCAt                                                >  1:612600/1‑234 (MQ=255)                                                                                                                                                               ccccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGc                                              >  1:546139/1‑236 (MQ=255)                                                                                                                                                                cccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctgggccagccacagttcgcattt                                                                                                                                                                   >  2:629807‑M2/1‑93 (MQ=255)                                                                                                                                                                cccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCt                                                     <  2:360729/228‑1 (MQ=255)                                                                                                                                                                 ccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGcc                                                                >  2:497434/1‑216 (MQ=255)                                                                                                                                                                                  cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGctgctg                                                                                                                               <  2:632239/136‑1 (MQ=255)                                                                                                                                                                                  cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGctgctg                                                                                                                               >  1:632240/1‑136 (MQ=255)                                                                                                                                                                                  cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTTCACATTGCGTTGCCGCAGGCAGCGCTc                                                                                              >  1:35996/1‑169 (MQ=255)                                                                                                                                                                                  cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGc                                                                                                                        <  2:495241/143‑1 (MQ=255)                                                                                                                                                                                  cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGc                                                                                                                        >  1:495242/1‑143 (MQ=255)                                                                                                                                                                                  cATGATTACCCTGGCCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGCAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCAc                                                                                                                                                   >  2:13437/1‑116 (MQ=255)                                                                                                                                                                                         aCCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGc                                                       >  2:65749/1‑201 (MQ=255)                                                                                                                                                                                              ggTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTTGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTggcgg                 <  2:404229/234‑1 (MQ=255)                                                                                                                                                                                              ggTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCa               >  1:627301/1‑236 (MQ=255)                                                                                                                                                                                                  aaaTGCGAACTGTGGCTGGCCCAGGcgctgcagccaggactccgcgaggtccgtacgcccctgggccagccacagttcgcatttgaccagggtaatcatggccaggtagtagaccggg                                                                                                                                 >  2:629807‑M1/1‑25 (MQ=255)                                                                                                                                                                                                  aaaTGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGcaca                                                                                                                     >  1:43089/1‑130 (MQ=255)                                                                                                                                                                                                  aaaTGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTgcagc                                                                                                         <  2:583498/142‑1 (MQ=255)                                                                                                                                                                                                  aaaTGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTgcagc                                                                                                         >  1:583499/1‑142 (MQ=255)                                                                                                                                                                                                   aaTGCGACCTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATc                                                                                          <  2:423763/156‑1 (MQ=255)                                                                                                                                                                                                       cGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGcc                                                      <  2:259578/188‑1 (MQ=255)                                                                                                                                                                                                            tgtgGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTggcggc                >  2:389405/1‑221 (MQ=255)                                                                                                                                                                                                            tgtgGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGt  <  1:506439/235‑1 (MQ=255)                                                                                                                                                                                                            tgtgGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCCGGGCCAGCCCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGccgcag                                                                                                       >  2:66577/1‑134 (MQ=255)                                                                                                                                                                                                                  tggcCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGATAAAGCGCGGCCAGGCCAGTggc                   >  1:293669/1‑212 (MQ=255)                                                                                                                                                                                                                     cccAGGcgctgcagccaggactccgcgaggtccgtacgcccctgggccagccacagttcgcatttgaccagggtaatcatggccaggtagaagaccgggggcacatctcagatgtgcatcaagcgctcggccgcggccggctccgcaaa                                                                               >  1:138069‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                     cccAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctgggccagccacagttcgcatttgaccagggtaatcatggccaggtagtagaccgggggcaca                                                                                                                           <  2:270371‑M2/105‑66 (MQ=255)                                                                                                                                                                                                                     cccAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctgggccagccacagttcgcatttgaccagggtaatcatggccaggtagtagaccgggggcaca                                                                                                                           >  1:270372‑M2/1‑40 (MQ=255)                                                                                                                                                                                                                       cAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCg                                                               <  2:147942/163‑1 (MQ=255)                                                                                                                                                                                                                       cAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGccgcgctt                                           >  2:697067/1‑176 (MQ=255)                                                                                                                                                                                                                        aGGcgctgcagccaggactccgcgaggtccgtacgcccctgggccagccacagttcgcatttgaccagggtaatcatggccaggcagtagaccgggggcacatcccagatgtgcatcaagcgctcgg                                                                                                  >  2:156976‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                          |                                                                                                                                                                                                                             TTTGCGCGCGGGGCTGGGCGAGGCGCGAGCGTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGT  >  AE015451/885934‑886371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.