New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 886151	40 (0.980)	3 (0.080)	3/316	NT	6.9%	coding (2062/2718 nt)	PP_0767	Transcriptional regulator, LuxR family
	?	AE015451	= 886185	43 (1.120)					coding (2096/2718 nt)	PP_0767	Transcriptional regulator, LuxR family

GTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGTCAGCGCCCTGAGCCAATGGCTTGCCCTGCTG  >  AE015451/885964‑886402                                                                                                                                                                                                                              |                                                                                                                                                                                                                          gTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGAc                                                                                                                                                                                                               >  1:337247/1‑234 (MQ=255)                       aTCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCcggcggc                                                                                                                                                                                       >  1:575682/1‑236 (MQ=255)                          ggTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGa                                                                                                                                                                                                   >  2:453679/1‑221 (MQ=255)                                        cggcACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATc                                                                                                                                                                      >  1:478117/4‑236 (MQ=255)                                         gCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGGCCGGGCTGCAGCGCCTGGGCCAGAc                                                                                                                                                                                                               >  2:147629/1‑194 (MQ=255)                                                      gCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGTCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGtt                                                                                                                                                         <  1:461273/235‑1 (MQ=255)                                                                                tttGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCt                                                                                                                              <  2:575681/236‑1 (MQ=255)                                                                                tttGCGGAGCCGGCCGCGGCCGAGCGCTTGATGCACATCTGAGATGTGCCCCCGGTCTTCTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctggg                                                                                                                                                                                                                     >  1:138069‑M2/1‑143 (MQ=255)                                                                                               gaggccgagCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGt                                                                                                                >  1:404230/1‑235 (MQ=255)                                                                                                   ccgagCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTGCCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcct                                                                                                                                                                                                                        >  2:156976‑M2/1‑124 (MQ=255)                                                                                                               tGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGc                                                                                                >  1:725880/1‑235 (MQ=255)                                                                                                                             gtgCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCt                                                                                    <  2:478116/233‑1 (MQ=255)                                                                                                                                 ccccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGc                                                                                                                       >  2:762021/1‑194 (MQ=255)                                                                                                                                 ccccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCAt                                                                               >  1:612600/1‑234 (MQ=255)                                                                                                                                 ccccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGc                                                                             >  1:546139/1‑236 (MQ=255)                                                                                                                                  cccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctgggccagccacagttcgcattt                                                                                                                                                                                                  >  2:629807‑M2/1‑93 (MQ=255)                                                                                                                                  cccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCt                                                                                    <  2:360729/228‑1 (MQ=255)                                                                                                                                   ccGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGcc                                                                                               >  2:497434/1‑216 (MQ=255)                                                                                                                                                    cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGctgctg                                                                                                                                                              >  1:632240/1‑136 (MQ=255)                                                                                                                                                    cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGctgctg                                                                                                                                                              <  2:632239/136‑1 (MQ=255)                                                                                                                                                    cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTTCACATTGCGTTGCCGCAGGCAGCGCTc                                                                                                                             >  1:35996/1‑169 (MQ=255)                                                                                                                                                    cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGc                                                                                                                                                       >  1:495242/1‑143 (MQ=255)                                                                                                                                                    cATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGc                                                                                                                                                       <  2:495241/143‑1 (MQ=255)                                                                                                                                                    cATGATTACCCTGGCCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGCAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCAc                                                                                                                                                                                  >  2:13437/1‑116 (MQ=255)                                                                                                                                                           aCCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGc                                                                                      >  2:65749/1‑201 (MQ=255)                                                                                                                                                                ggTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTTGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTggcgg                                                <  2:404229/234‑1 (MQ=255)                                                                                                                                                                ggTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCa                                              >  1:627301/1‑236 (MQ=255)                                                                                                                                                                    aaaTGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGcaca                                                                                                                                                    >  1:43089/1‑130 (MQ=255)                                                                                                                                                                    aaaTGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTgcagc                                                                                                                                        <  2:583498/142‑1 (MQ=255)                                                                                                                                                                    aaaTGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTgcagc                                                                                                                                        >  1:583499/1‑142 (MQ=255)                                                                                                                                                                     aaTGCGACCTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATc                                                                                                                         <  2:423763/156‑1 (MQ=255)                                                                                                                                                                         cGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGcc                                                                                     <  2:259578/188‑1 (MQ=255)                                                                                                                                                                              tgtgGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTggcggc                                               >  2:389405/1‑221 (MQ=255)                                                                                                                                                                              tgtgGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGt                                 <  1:506439/235‑1 (MQ=255)                                                                                                                                                                              tgtgGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCCGGGCCAGCCCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGccgcag                                                                                                                                      >  2:66577/1‑134 (MQ=255)                                                                                                                                                                                    tggcCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGATAAAGCGCGGCCAGGCCAGTggc                                                  >  1:293669/1‑212 (MQ=255)                                                                                                                                                                                       cccAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctgggccagccacagttcgcatttgaccagggtaatcatggccaggtagtagaccgggggcaca                                                                                                                                                          >  1:270372‑M2/1‑40 (MQ=255)                                                                                                                                                                                       cccAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGcctgggccagccacagttcgcatttgaccagggtaatcatggccaggtagtagaccgggggcaca                                                                                                                                                          <  2:270371‑M2/105‑66 (MQ=255)                                                                                                                                                                                         cAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCg                                                                                              <  2:147942/163‑1 (MQ=255)                                                                                                                                                                                         cAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGccgcgctt                                                                          >  2:697067/1‑176 (MQ=255)                                                                                                                                                                                                   cGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGc                                                                                                                       >  1:716374/1‑128 (MQ=255)                                                                                                                                                                                                   cGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGc                                                                                                                       <  2:716373/128‑1 (MQ=255)                                                                                                                                                                                                    ggACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCCGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCCTCCGCCGCTGCCGTTGc                                                                                                                                                       >  2:448337/1‑95 (MQ=255)                                                                                                                                                                                                    ggACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCg                                  >  1:6750/1‑212 (MQ=255)                                                                                                                                                                                                    ggACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGCTGCAGCAGGCAGCGCTCGATcac                                                                                                                       >  1:154683/1‑125 (MQ=255)                                                                                                                                                                                                    ggACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACAGTGCGtt                                                                                                                                             >  2:98640/1‑105 (MQ=255)                                                                                                                                                                                                         tCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCatgatg                                         >  1:247978/1‑200 (MQ=255)                                                                                                                                                                                                           gcgGAGTCCTGGCTGCAGCGCCTGGTCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCATTggctcagg                                             <  1:196801/194‑6 (MQ=255)                                                                                                                                                                                                           gcgGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGTCAGCGCCCTGAGCCAATGGCTTGCCctgct   >  1:714258/1‑236 (MQ=255)                                                                                                                                                                                                              gAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGGAGCGACGATGCCg                                                                                              >  2:614272/1‑142 (MQ=255)                                                                                                                                                                                                                             cgcCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGTCAGCGCCCTGAg                     <  2:339280/200‑1 (MQ=255)                                                                                                                                                                                                                              gcCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGTCAGCGCCCTGAGCCAATGGCTTGCCcggctg  >  2:550013/1‑218 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                          GTGCCGGGACATCAGTGTGCTCATCGGTCATTGCGTGATTGCCACGCTCGATGGCCGGGAAGGTCACTTTGCCGAGGCCTTTGCGGAGCTGGCCGAGGCCGAGCGCTTGATGCACATCTGGGATGTGCCCCCGGTCTACTACCTGGCCATGATTACCCTGGTCAAATGCGAACTGTGGCTGGCCCAGGGGCGTACGGACCTCGCGGAGTCCTGGCTGCAGCGCCTGGGCCAGACCTATGGCGGCGAGCAGCCGGCGGCGGCACCGGAGTTCCATCCGCTGCTGCCGTTGCACATTGCGTTGCAGCAGGCAGCGCTCGATCGCATCCAGTTGCGTAGCGACGATGCCGTGCAACGCCTGGCATGCCTGGTAAAGCGCGGCCAGGCCAGTGGCGGCATGATGCTTACCGTCAGCGCCCTGAGCCAATGGCTTGCCCTGCTG  >  AE015451/885964‑886402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.