New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2691885	29 (0.710)	3 (0.080)	3/312	NT	9.5%	coding (46/534 nt)	PP_2359	putative Type 1 pili subunit CsuA/B protein
	?	AE015451	= 2691895	30 (0.790)					coding (56/534 nt)	PP_2359	putative Type 1 pili subunit CsuA/B protein

GCGGTTGACCCAGGCGGCAACAGCCGCTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGAGCATCCTGTGCTCTGCAGGTACGGTACCTGTGATCAA  >  AE015451/2691651‑2692117                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         gCGGTTGACCCAGGCGGCAACAGCCGCTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGc                                                                                                                                                                                                                                         >  1:674451/1‑236 (MQ=255)              gcggcAACAGCCGGTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccag                                                                                                                                                                                                                            >  1:534903‑M2/1‑232 (MQ=255)               cggcAACAGCCGCTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccag                                                                                                                                                                                                                            >  1:638640‑M2/1‑231 (MQ=255)                          gCTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAggcgg                                                                                                                                                                                                                  <  1:544967/234‑1 (MQ=255)                           cTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTgg                                                                                                                                                                                                                                    >  2:649874/1‑215 (MQ=255)                                              cGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAg                                                                                                                                                                                                  <  1:29837/230‑1 (MQ=255)                                              cGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCa                                                                                                                                                                                             <  1:409608/235‑1 (MQ=255)                                                               cagcagcCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTGATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTgg                                                                                                                                                                                                                                    >  2:157257/1‑179 (MQ=255)                                                                      ccgcAAGTACCGCTTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAg                                                                                                                                                                                            <  1:25820/210‑1 (MQ=255)                                                                                cGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCGTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGAc                                                                                                                                                                                                        <  2:105068/190‑1 (MQ=255)                                                                                               gtgtGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGc                                                                                                                                                                                                                                   <  2:263872/148‑1 (MQ=255)                                                                                                   ggTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggc                                                                                                                                                                                                                          <  2:617945‑M2/153‑7 (MQ=255)                                                                                                   ggTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggc                                                                                                                                                                                                                          >  1:617946‑M2/1‑147 (MQ=255)                                                                                                              aaCCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATggcacgtcg                                                                                                                                              <  1:63104/218‑1 (MQ=255)                                                                                                                  gcgTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCc                                                                                                                                                                                                                               <  2:573890‑M2/133‑2 (MQ=255)                                                                                                                       cgcTGCCGGCCGGGCTTTACCGCGACACCCTCAAAGTGACCCTAGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTa                                                                                                                                                                                                >  2:465987/1‑159 (MQ=255)                                                                                                                          tGCCGGCCGGGCTGTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACt                                                                                                                           <  1:135771/225‑1 (MQ=255)                                                                                                                                 cggGCTTTACCGCGACGCCCTCAGAGTGACCCTGGACTGGTAACCCCGCAAGGAGACTCCGATGAGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggtt                                                                                                                                                              >  1:173927‑M2/1‑117 (MQ=255)                                                                                                                                  gggCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATggcacgtcgg                                                                                                                                             >  2:227906/1‑199 (MQ=255)                                                                                                                                         aCCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCg                                                                                                                                                                                        <  2:386596/149‑1 (MQ=255)                                                                                                                                                cacCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggccc                                                                                                                                                                                                                        >  1:509661‑M2/1‑102 (MQ=255)                                                                                                                                                cacCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggccc                                                                                                                                                                                                                        <  2:509660‑M2/110‑9 (MQ=255)                                                                                                                                                  cccTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggcccaggc                                                                                                                                                                                                                    >  1:563357‑M2/1‑100 (MQ=255)                                                                                                                                                  cccTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggcccaggc                                                                                                                                                                                                                    <  2:563356‑M2/112‑13 (MQ=255)                                                                                                                                                             aCCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCAccgc                                                                             >  1:312457/1‑236 (MQ=255)                                                                                                                                                                cTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcg                                                                                                                                                                                     <  2:2209‑M2/129‑44 (MQ=255)                                                                                                                                                                cTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcg                                                                                                                                                                                     >  1:2209‑M2/1‑86 (MQ=255)                                                                                                                                                                cTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGAt                                                                                              <  1:597280/216‑1 (MQ=255)                                                                                                                                                                cTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGAt                                                                                              >  2:597279/1‑216 (MQ=255)                                                                                                                                                                cTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTCGCTTCCCAGGCCCAGGCGGCCACGGTCACAGGGAGTATCCGcc                                                                                                                                                                                          >  2:60346/1‑123 (MQ=255)                                                                                                                                                                          aaCCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGgaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttctcatcggagtctccttgcggggttaccagtccagggtcactctgagggcgtcgcggtaaagcccg                                                                                                                     >  1:173927‑M1/1‑66 (MQ=255)                                                                                                                                                                              aCGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGTGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACtt                                                                                                           <  1:240458/189‑1 (MQ=255)                                                                                                                                                                                         cTCCGATGCGAGCGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccag                                                                                                                                                                                                                            >  2:26386‑M2/1‑61 (MQ=255)                                                                                                                                                                                                 cgaacgaaCCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGgaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccag                                                                                                                                                    <  2:2209‑M1/129‑87 (MQ=255)                                                                                                                                                                                                 cgaacgaaCCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGgaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccag                                                                                                                                                    >  1:2209‑M1/1‑43 (MQ=255)                                                                                                                                                                                                 cgaacgaaCCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGccccg                                                                   >  1:79249/1‑208 (MQ=255)                                                                                                                                                                                                       aacCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTg                                                                                                                >  2:751155/1‑159 (MQ=255)                                                                                                                                                                                                          cTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGt                                                                                                                                                                                                                                       <  1:586682/37‑1 (MQ=255)                                                                                                                                                                                                                    gCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGGACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATg                                                                        <  1:573891/186‑1 (MQ=255)                                                                                                                                                                                                                    gCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAgg                                               <  1:747007/211‑1 (MQ=255)                                                                                                                                                                                                                       tCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCccaggc                                                                                                                                                                                                                          <  2:586681‑M2/37‑7 (MQ=255)                                                                                                                                                                                                                          tCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGcc                                           >  2:369409/1‑209 (MQ=255)                                                                                                                                                                                                                          tCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGAGCATCCtg                               >  2:749011/1‑221 (MQ=255)                                                                                                                                                                                                                          tCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGAGCATCCTGTGctct                         >  1:641117/1‑227 (MQ=255)                                                                                                                                                                                                                          tCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCATGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGCGCATCCTGTGCTCTGCAggta                  >  1:421953/1‑234 (MQ=255)                                                                                                                                                                                                                          tCGCAGGCCTGGACCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAg                                                >  2:419858/1‑204 (MQ=255)                                                                                                                                                                                                                               ggcctgggcctgGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGAGCATCCTGTGCTCTGCAggtacggt              <  2:674450/233‑1 (MQ=255)                                                                                                                                                                                                                                gcctgggcctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgaggg                                                                                                                                      <  2:563356‑M1/112‑101 (MQ=255)                                                                                                                                                                                                                                gcctgggcctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgaggg                                                                                                                                      >  1:563357‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                   tgggcctggCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGAGCATCCTGTGCTCTGCAggtacggtac            <  1:419859/231‑1 (MQ=255)                                                                                                                                                                                                                                    gggcctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtg                                                                                                                                    >  1:509661‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                    gggcctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtg                                                                                                                                    <  2:509660‑M1/110‑103 (MQ=255)                                                                                                                                                                                                                                      gcctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtgtcgcggtaaagcccggccggcagcgcacgcggttgcgccactacc                                                                                       <  2:617945‑M1/153‑148 (MQ=255)                                                                                                                                                                                                                                      gcctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtgtcgcggtaaagcccggccggcagcgcacgcggttgcgccactacc                                                                                       >  1:617946‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                      gcctgggaagccaacgccaggcccaggcctgcgagga                                                                                                                                                                                                           <  2:586681‑M1/37‑32 (MQ=255)                                                                                                                                                                                                                                        ctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtgtcgcggtaaagcccggccggcagcgcacgcggttgcgccactaccacaccgtagatgggaatcggtacttgctggctgctgctaatggtgaaggcccgtgcctggccgacgccgtagcggctgttgccg   >  1:638640‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                        ctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtgtcgcggtaaagcccggccggcagcgcacgcggttgcgccactaccacaccgtagatgggaatcggtacttgctggctgctgctaatggtgaaggcccgtgcctggccgacgccgtaccggctgttgccgc  >  1:534903‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                        ctgggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgctcgcatcggag                                                                                                                                                                             >  2:26386‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                           ggaagccaacgccaggcccaggcctgcgaggacgcaatatgaaaggttcgttcgcatcggagtctccttgcgtggttaccagtccagggtcactctgagggtgtcgcggtaaagcccggccggcagcgcacgc                                                                                                      <  2:573890‑M1/133‑133 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                         GCGGTTGACCCAGGCGGCAACAGCCGCTACGGCGTCGGCCAGGCACGGGCCTTCACCATTAGCAGCAGCCAGCAAGTACCGATTCCCATCTACGGTGTGGTAGTGGCGCAACCGCGTGCGCTGCCGGCCGGGCTTTACCGCGACACCCTCAGAGTGACCCTGGACTGGTAACCACGCAAGGAGACTCCGATGCGAACGAACCTTTCATATTGCGTCCTCGCAGGCCTGGGCCTGGCGTTGGCTTCCCAGGCCCAGGCGGCCACGGTGACAGGGAGTATCAGCTCGACCCTGACGCTGACTGCGGCCTGCCAGGTCAATGGCACGTCGGGCACGTCGGGGCTTGACTTCGGTGCCCTGGACTTCGGCACCGAGGATGCCTTGTTCGTCACCGCCGATGCCCAGGTGCTGGGAGGCGGGGGAGGCGCCATGAGCATCCTGTGCTCTGCAGGTACGGTACCTGTGATCAA  >  AE015451/2691651‑2692117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.