New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3328566	35 (0.860)	4 (0.100)	4/314	NT	11.0%	coding (117/1047 nt)	PP_2927	conserved protein of unknown function
	?	AE015451	= 3328706	32 (0.840)					coding (257/1047 nt)	PP_2927	conserved protein of unknown function

AGCTCGCGGTAGCGTGTTGTACCGCGAACGAAAACCCTTGAACCGACCACCGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGGCGGCGCGGCAGTGGTGGCGGCGCTGTTCCAT  >  AE015451/3328340‑3328782                                                                                                                                                                                                                                   |                                                                                                                                                                                                                         aGCTCGCGGTGGCGTGTTGTACCGCGAACGAAAACCCTTGAACCGACCACCGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCa                                                                                                                                                                                                                  <  1:188542/235‑1 (MQ=255)      gcgGTAGCGTGTTGTACCGCGAACGAAAACCCTTGAACCGACCACCGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGt                                                                                                                                                                                                            >  1:211630/1‑236 (MQ=255)                            acgaaAACCCTTGAACCGACCACCGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGaa                                                                                                                                                                                      >  1:517563/1‑236 (MQ=255)                                    ccTTGAACCGACCACCGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCgg                                                                                                                                                                              <  1:59955/236‑1 (MQ=255)                                                 accGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCcgc                                                                                                                                                                   <  2:676710/234‑1 (MQ=255)                                                           cGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGa                                                                                                                                                                                       >  2:162992/1‑204 (MQ=255)                                                                        ccTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCtgttcttcaggcagcacaaaacggcccttgtcatggaccatgtagcccgatgccgcctgggcattcaaccattctcgcac                                                                                                                                          <  1:224991‑M1/236‑81 (MQ=255)                                                                               ggCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCggca                                                                                                                                                                                      >  1:221461/1‑183 (MQ=255)                                                                                   aTGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGACCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCcgc                                                                                                                                                                   <  1:25752/200‑1 (MQ=255)                                                                                          tcttGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         <  1:275842/235‑1 (MQ=255)                                                                                                     aggGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGACCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCg                                                                                                                                                                                         >  1:476240/1‑160 (MQ=255)                                                                                                       ggCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCtgttcttcaggcagcacaaaacggccctt                                                                                                                                                                                             >  1:25004‑M1/1‑125 (MQ=255)                                                                                                       ggCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCtgttcttcaggcagcacaaaacggccctt                                                                                                                                                                                             <  2:25004‑M1/154‑30 (MQ=255)                                                                                                       ggCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGa                                                                                                            >  1:581820/1‑235 (MQ=255)                                                                                                          aGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAg                                                                                                        >  1:579110/1‑236 (MQ=255)                                                                                                            gTCATGGAGGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACaa                                                                                                         <  2:579109/233‑1 (MQ=255)                                                                                                               aTGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAggg                                                                                                      >  2:257465/1‑233 (MQ=255)                                                                                                                   aCGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         <  2:211629/210‑1 (MQ=255)                                                                                                                         cAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTgga                                                                                                                                                                                          >  2:479310/1‑138 (MQ=255)                                                                                                                          aaGGCTTCACGATTTCATGGGCCAGCTGGTGGGCGACACGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACGGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTGACCCCTGAGCAACTGGCGGAAAAGACCgc                                                                                                                                                                              >  2:149114/1‑149 (MQ=255)                                                                                                                                tCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAgg                                                                                                       >  1:45264/1‑215 (MQ=255)                                                                                                                                    gATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         <  2:541493/193‑1 (MQ=255)                                                                                                                                       ttCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         <  1:660519/190‑1 (MQ=255)                                                                                                                                                     ggtggGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAgg                                                                                                                                     >  2:394469/1‑164 (MQ=255)                                                                                                                                                              cATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGCACCGGGCCATGTCCGACAGCCAGGc                                                                                                                                                                                                               <  1:397084/81‑1 (MQ=255)                                                                                                                                                               aTGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGAc                                                     <  1:162993/234‑1 (MQ=255)                                                                                                                                                                tGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTcc                                                  <  1:683004/236‑1 (MQ=255)                                                                                                                                                                           gcgACGCTGGCCAATGTCATTCTCGGCGAGCAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAg                                                                                                                                                                                                  >  2:397083/1‑81 (MQ=255)                                                                                                                                                                               cGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAACACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         <  1:510494/150‑1 (MQ=255)                                                                                                                                                                                 cTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCcgg                                 <  1:41982/236‑1 (MQ=255)                                                                                                                                                                                                 tcGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATc                                                                                                                              >  1:699648/1‑127 (MQ=255)                                                                                                                                                                                                 tcGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATc                                                                                                                              <  2:699647/127‑1 (MQ=255)                                                                                                                                                                                                 tcGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGgcggcgcggc                        <  1:533718/229‑1 (MQ=255)                                                                                                                                                                                                    gCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGGCGGCGCGGCAGTGGTggcg              <  1:684343/236‑1 (MQ=255)                                                                                                                                                                                                      gATGAACTGGGGCTGTACCGGGCCATGGCCtgttcttcaggcagcacaaaacg                                                                                                                                                                                                   >  1:724692‑M1/1‑30 (MQ=255)                                                                                                                                                                                                                       ccGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGtgctgc                                                                                        >  2:548081/1‑143 (MQ=255)                                                                                                                                                                                                                         gggCCATGGCCtgttcttcaggcagcacaaaacggcccttgtcatggaccatgtagcccgatgccgc                                                                                                                                                                  <  2:473729‑M1/67‑57 (MQ=255)                                                                                                                                                                                                                         gggCCATGGCCtgttcttcaggcagcacaaaacggcccttgtcatggaccatgtagcccgatgccgc                                                                                                                                                                  >  1:473730‑M1/1‑11 (MQ=255)                                                                                                                                                                                                                          ggCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCcggc                                >  2:451603/1‑196 (MQ=255)                                                                                                                                                                                                                             cATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTAcc                                        >  1:684988/1‑184 (MQ=255)                                                                                                                                                                                                                             cATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCGGAAGAACAGGCCATGGCCCTGGCGCTggagga                                                      >  1:359125/1‑171 (MQ=255)                                                                                                                                                                                                                                  ccGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         >  1:534936/1‑99 (MQ=255)                                                                                                                                                                                                                                  ccGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCt                                                                                                                         <  2:534935/99‑1 (MQ=255)                                                                                                                                                                                                                                  ccGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGgcggcgc                           >  1:148593/1‑193 (MQ=255)                                                                                                                                                                                                                                  ccGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGGCGGCGCGGCa                       >  2:754691/1‑197 (MQ=255)                                                                                                                                                                                                                                  ccGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGGCGGCGCGGCAGTGGTGGCGGCGCTGTTCCAt  >  1:10514/1‑218 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                         AGCTCGCGGTAGCGTGTTGTACCGCGAACGAAAACCCTTGAACCGACCACCGCCTTCCCGGAGCGGACGTCCCTCGTTGGCGATGGCCTTCTTGCAGAGGAGGGCAGGTCATGGACGAGGCAAGGCTTCACGATTTCATGGGCAAGCTGGTGGGCGACATGGGCGCAGCGGCGACGCTGGCCAATGTCATTCTCGGCGATGAACTGGGGCTGTACCGGGCCATGGCCGACAGCCAGGCGGTCACCCCTGAGCAACTGGCGGAAAAGACCGGCTGCCACCCGCGGCTGGTGCGAGAATGGTTGAATGCCCAGGCGGCATCGGGCTACATGGTCCATGACAAGGGCCGTTTTGTGCTGCCTGAAGAACAGGCCATGGCCCTGGCGCTGGAGGACTCCCCGGCCTACATGGCCGGCGGCGCGGCAGTGGTGGCGGCGCTGTTCCAT  >  AE015451/3328340‑3328782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.