New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 147220	27 (0.660)	3 (0.080)	3/320	NT	11.0%	coding (978/1230 nt)	PP_0138	conserved membrane protein of unknown function
	?	AE015451	= 147242	23 (0.590)					coding (1000/1230 nt)	PP_0138	conserved membrane protein of unknown function

TTGTCGAAGGCGCCACGGAAGGCTTCGATGTGGCCAAGAGCCTGCTGCCCTACCTGGTGGCGATGCTGGTGGCGGTGGGTGTGCTGCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGATCTTCGTCTGCTACTGGTTCTTTGCC  >  AE015451/147033‑147469                                                                                                                                                                                                                  |                                                                                                                                                                                                                                    ttGTGGAAGGCGCCACGGAAGGCTTCGATGTGGCCAAGAGCCTGCTGCCCTACCTGGTGGCGATGCTGGTGGCGGTGGGTGTGCTGCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCgag                                                                                                                                                                                                              >  2:501780/1‑233 (MQ=255)                  gAAGGCTTCGATGTGGCCAAGAGCCTGCTGCCCTACCTGGTGGCGATGCTGGTGGCGGTGGGTGTGCTGCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGc                                                                                                                                                                                            <  1:310335/234‑1 (MQ=255)                      gCTTCGATGTGGCCAAGAGCCTGCTGCCCTACCTGGTGGCGATGCTGGTGGCGGTGGGTGTGCTGCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGa                                                                                                                                                                                       <  1:501781/235‑1 (MQ=255)                                                                        gCGGTGGGTGTGCTTCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCg                                                                                                                                                                                           <  1:159959/181‑1 (MQ=255)                                                                             gggtgTGCTGCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCCGCGACGATTc                                                                                                                                                       >  1:371199/1‑212 (MQ=255)                                                                                       cgcgcCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAac                                                                                                                                       >  1:719110/1‑218 (MQ=255)                                                                                             tctGGTGCCCTGGAGCTGGCCCTGGACTGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTGAAGCCGTTCTCTGGCAGCGCAGCGCGGGCa                                                                                                                                                                                                                          <  2:590381/129‑1 (MQ=255)                                                                                                 gTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCAt                                                                                                                                                                                                         <  1:30446/142‑1 (MQ=255)                                                                                                         gAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAac                                                                                                                                       <  2:316061/200‑1 (MQ=255)                                                                                                            cgggCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCGTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCa                                                                                                                                                                                                                          <  1:77160/112‑1 (MQ=255)                                                                                                                              cGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCTGTGTACTTTgg                                                                                                         <  1:708390/209‑1 (MQ=255)                                                                                                                                  aTGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCCCCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTa                                                                                                               <  1:88499/199‑1 (MQ=255)                                                                                                                                       gTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATcc                                                                                           >  2:414680/1‑214 (MQ=255)                                                                                                                                             tGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACtttt                                                                                                          >  2:120642/1‑192 (MQ=255)                                                                                                                                                  gggCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGGGGCa                                                                                                                                                                 >  1:86626/1‑133 (MQ=255)                                                                                                                                                   ggCCTGGACACGCGCTTCGTCGACGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCActgct                                                         <  1:261039/236‑1 (MQ=255)                                                                                                                                                       tGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGc                                                      >  1:705146/1‑235 (MQ=255)                                                                                                                                                         gACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGcc                                                                                                                    <  2:691139/171‑1 (MQ=255)                                                                                                                                                                 cTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAg                                           >  1:494376/1‑236 (MQ=255)                                                                                                                                                                               tGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCCAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAaccac                                                                                                                                    >  2:260845/1‑133 (MQ=255)                                                                                                                                                                                  ccACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGATc                          <  1:509320/236‑1 (MQ=255)                                                                                                                                                                                   cACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGa                            >  2:473126/1‑233 (MQ=255)                                                                                                                                                                                         gcTGGTCAAGCCGTTCTCTGGCAGCGcagcgcggtgggcaggccctcgacgaagcgcgtgtccaggcccatccagctaaccgcatggcggataccgtccagggccagctccaggg                                                                                                                                            >  1:550103‑M2/1‑26 (MQ=255)                                                                                                                                                                                         gcTGGTCAAGCCGTTCTCTGGCAGCGcagcgcggtgggcaggccctcgacgaagcgcgtgtccaggcccatccagctaaccgcatggcggataccgtccagggccagctccaggg                                                                                                                                            <  2:550102‑M2/115‑90 (MQ=255)                                                                                                                                                                                         gcTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGc                                                                           >  1:154246/1‑180 (MQ=255)                                                                                                                                                                                              tCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGttt                                               >  1:662335/1‑203 (MQ=255)                                                                                                                                                                                                          ctGGCAGCGcagcgcggtgggcaggccctcgacgaagcgcgtgtccaggcccatccagctaaccgcatggcggataccgtccagggccagctccagggcaccagaggcgcgcagcacacccaccgccaccagcatcgccaccaggtagggcagcaggctcttggccacatcgaagccttccgtggcgccttcgacaaaggcttcatacaccttcaccc                    <  1:21363‑M2/218‑210 (MQ=255)                                                                                                                                                                                                           tGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGATCTTCGTCTGCTACTGGTTCTTTGcc  <  1:559546/235‑1 (MQ=255)                                                                                                                                                                                                                gcgcagcgcGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGCGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTAc                                                                                                                         >  1:70631/1‑111 (MQ=255)                                                                                                                                                                                                                 cgcagcgcGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGATCTTCGTCTGCTACTGGTTCTTTGcc  <  1:642408/229‑1 (MQ=255)                                                                                                                                                                                                                 cgcagcgcGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGATCTTCGTCTGCTACTGGTTCTTTGcc  >  2:642407/1‑229 (MQ=255)                                                                                                                                                                                                                  |                                                                                                                                                                                                                                    TTGTCGAAGGCGCCACGGAAGGCTTCGATGTGGCCAAGAGCCTGCTGCCCTACCTGGTGGCGATGCTGGTGGCGGTGGGTGTGCTGCGCGCCTCTGGTGCCCTGGAGCTGGCCCTGGACGGTATCCGCCATGCGGTTAGCTGGATGGGCCTGGACACGCGCTTCGTCGAGGGCCTGCCCACCGCGCTGGTCAAGCCGTTCTCTGGCAGCGCAGCGCGGGCAATGCTGATCGAGACCATGCAGACCCAAGGCGTGGACAGTTTCCCTGCCTTGGTGGCAGCGACGATTCAGGGCAGCACCGAAACCACCTTCTACGTACTGGCCGTGTACTTTGGTGCCGTGGGCATCCAGCGCGTGCGCCATGCGGTCGGTTGCGCACTGCTGGCCGAGTTTTCAGGGGTAGTCGCGGCGATCTTCGTCTGCTACTGGTTCTTTGCC  >  AE015451/147033‑147469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.