Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC JC	CP009273	2,770,391	IS2 (+) +5 bp	20.0%	coding (156‑160/201 nt)	ypjJ →	uncharacterized protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2770391 =	38 (0.660)	8 (0.130)	8/276	NT	16.9%	coding (156/201 nt)	ypjJ	uncharacterized protein
	?	CP009273	2989720 =	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region
*	?	CP009273	= 2770395	38 (0.660)	11 (0.180)	11/276	NT	21.8%	coding (160/201 nt)	ypjJ	uncharacterized protein
	?	CP009273	= 2991050	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

TCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGG  >  CP009273/2770246‑2770544                                                                                                                                                      |                                                                                                                                                      tCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACg                                                                                                                                                       <  2:351040/150‑1 (MQ=255)     tAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGa                                                                                                                                                   <  1:410289/150‑1 (MQ=255)       aaCGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAAc                                                                                                                                                 >  1:124189/1‑150 (MQ=255)        aCGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAAcg                                                                                                                                                >  1:443089/1‑150 (MQ=255)         cGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAAcgc                                                                                                                                               >  1:794776/1‑150 (MQ=255)             gggCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggcccc                                                                                                                                           <  2:910589‑M1/150‑13 (MQ=255)                 caTGGCGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACCCCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGAc                                                                                                                                       <  2:323861/149‑1 (MQ=255)                  aTGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGAcc                                                                                                                                      >  1:631222/1‑150 (MQ=255)                    gACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCg                                                                                                                                     >  2:540382/1‑149 (MQ=255)                     aCGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCa                                                                                                                                   <  2:250825/150‑1 (MQ=255)                            ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGAcc                                                                                                                            <  2:451749‑M1/32‑1 (MQ=255)                             ccGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCg                                                                                                                           <  2:483542/150‑1 (MQ=255)                                  aGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGc                                                                                                                      >  2:614606/1‑150 (MQ=255)                                  aGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGc                                                                                                                      >  2:329083/1‑150 (MQ=255)                                   gCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCt                                                                                                                     <  1:903306/150‑1 (MQ=255)                                    cATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCtt                                                                                                                    >  2:87043/1‑150 (MQ=255)                                        cTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACt                                                                                                                >  2:755837/1‑150 (MQ=255)                                           cgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACtga                                                                                                              >  1:451749‑M1/104‑149 (MQ=255)                                              cccGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAg                                                                                                          >  1:1024708/1‑150 (MQ=255)                                               ccGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaat                                                                                                           >  2:743479‑M1/1‑104 (MQ=255)                                                 gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTa                                                                                                        >  1:941462‑M1/98‑149 (MQ=255)                                                         ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTg                                                                                                <  2:590285‑M1/60‑1 (MQ=255)                                                            tACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACt                                                                                            >  1:280167/1‑150 (MQ=255)                                                             aCTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACt                                                                                            >  1:423813/1‑149 (MQ=255)                                                              cTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTg                                                                                           <  1:577234/149‑1 (MQ=255)                                                               tGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                                                                         >  1:229694‑M1/1‑88 (MQ=255)                                                                 cACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACa                                                                                        <  2:107330/149‑1 (MQ=255)                                                                    cGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATaa                                                                                    <  1:614606/150‑1 (MQ=255)                                                                             tCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact                                                                            <  1:894812‑M1/149‑76 (MQ=255)                                                                              cAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTat                                                                           >  1:941684/1‑149 (MQ=255)                                                                                gTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                                                                        <  1:724086‑M1/150‑80 (MQ=255)                                                                                   gCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTatgaat                                                                       >  1:982502/1‑148 (MQ=255)                                                                                    cACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                    <  2:229694‑M1/150‑84 (MQ=255)                                                                                     aCGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactgcccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                                    >  1:496378‑M1/1‑66 (MQ=255)                                                                                     aCGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAg                                                                    >  1:568443/1‑149 (MQ=255)                                                                                      cGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactgcccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga                                                                  <  2:496378‑M1/150‑86 (MQ=255)                                                                                      cGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCGCCCTGAACTGACAATAAAGAGGTTATGAATGAGCa                                                                  <  2:185056/150‑1 (MQ=255)                                                                                       ggTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCaa                                                                 <  1:573237/150‑1 (MQ=255)                                                                                         tAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAaca                                                               <  1:540382/150‑1 (MQ=255)                                                                                         tAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAaca                                                               >  1:125693/1‑150 (MQ=255)                                                                                          aGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa                                                               >  2:583487‑M1/1‑61 (MQ=255)                                                                                             gTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAAcacca                                                            >  1:519457/1‑149 (MQ=255)                                                                                              tCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACcaca                                                          >  1:507310/1‑150 (MQ=255)                                                                                                  taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATgg                                                       >  2:203921‑M1/49‑149 (MQ=255)                                                                                                  tCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATggg                                                      <  1:1031852/150‑1 (MQ=255)                                                                                                  tCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATggg                                                      >  1:803385/1‑150 (MQ=255)                                                                                                    atgggttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGc                                                    >  1:943228‑M1/47‑150 (MQ=255)                                                                                                        gttaagtgataacagatgtctggaaatataggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGc                                                >  1:779956‑M1/43‑150 (MQ=255)                                                                                                        cacCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTg                                                 >  2:428651/1‑149 (MQ=255)                                                                                                             gCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGc                                             >  2:637568/1‑148 (MQ=255)                                                                                                               aGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggc                                         >  2:311804‑M1/1‑40 (MQ=255)                                                                                                                gggATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCgaga                                         >  2:221099/1‑149 (MQ=255)                                                                                                                         cGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCAcgccg                               <  2:125693/150‑1 (MQ=255)                                                                                                                          ggATATCACAGGAGTCCTGGCTGTATGCGGCGAACGCCGCCGGGCCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGACCTCACAATAAAGAGGTCGTGAATGAGCTACTGCCCATGGCGCCTGCATAGAGATATCAggtcgc                              <  2:491877/150‑1 (MQ=255)                                                                                                                            atatCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCgcgc                            >  1:622890/1‑150 (MQ=255)                                                                                                                                   aGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAg                     <  2:423813/150‑1 (MQ=255)                                                                                                                                    taggggcaaatccaGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAg                     >  2:457938‑M1/15‑149 (MQ=255)                                                                                                                                           tGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTg             >  1:788290/1‑150 (MQ=255)                                                                                                                                                 tgtACGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa         <  1:743479‑M1/148‑143 (MQ=255)                                                                                                                                                  gtACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCag       >  2:623015/1‑149 (MQ=255)                                                                                                                                                     cGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCaggagg   >  2:439119/1‑150 (MQ=255)                                                                                                                                                      gCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAggg  <  2:747832/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGATGAGTATCACCCTGAACTGACAATAAAGAGGTTATGAATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGG  >  CP009273/2770246‑2770544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.