mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BA000036 | 1,994,312 | 0 | G | C | 35.5% | 204.5 / 207.2 | 155 | intergenic (‑191/+293) | Cgl1890/Cgl1891 | Hypothetical protein/Hypothetical protein |
| * | BA000036 | 1,994,392 | 0 | A | G | 24.8% | 255.0 / 89.2 | 133 | intergenic (‑271/+213) | Cgl1890/Cgl1891 | Hypothetical protein/Hypothetical protein |
| * | BA000036 | 1,994,404 | 0 | C | A | 20.8% | 289.8 / 76.9 | 130 | intergenic (‑283/+201) | Cgl1890/Cgl1891 | Hypothetical protein/Hypothetical protein |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BA000036 | 2266645 = | 79 (0.850) | 4 (0.040) | 3/590 | 15.1 | 4.9% | intergenic (+247/+250) | Cgl2143/Cgl2144 | L‑asparaginase/archaeal Glu‑tRNAGln amidotransferase subunit D/Nucleotidyltransferase/DNA polymerase involved in DNA repair |
| ? | BA000036 | 2346282 = | NA (NA) | intergenic (+231/+5) | Cgl2211/Cgl2212 | Predicted permease/Transposase | |||||