BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 2653669	231 (1.290)	5 (0.030) +CGGCAT	4/228	NT	2.1%	coding (598/1161 nt)	safA	spore coat assembly protein SafA
*	?	NZ_CP034943	2653670 =	240 (1.280)	5 (0.030) +CGGCAT	4/228	NT	2.1%	coding (597/1161 nt)	safA	spore coat assembly protein SafA
Rejected: Frequency below/above cutoff threshold.

Only 100 of 272 total aligned reads displayed.

GTATCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGG  >  NZ_CP034943/2653532‑2653808

gTATCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATTAGCCGGATAATGATGATAAGGCTGAACAGCcg                                                                                                                                           >  1:758753‑M1/1‑138 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:2274285‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  2:1227228‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:2132587‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:2016925‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:1255511‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:1338003‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  2:1167651‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:396719‑M1/140‑5 (MQ=255)

  aTCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCcggc                                                                                                                                         <  1:543472‑M1/140‑5 (MQ=255)

           gCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGa                                                                                                                                >  1:286098/1‑140 (MQ=255)

            cTGATACATTGGATAATCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:1938078/140‑1 (MQ=255)

            cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGTTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAAACTGACATGGAACGAAATGAGCCGTATAATGATGATAAGGCTGAACAGACGGCATATTCGGaa                                                                                                                               <  2:353605/140‑1 (MQ=255)

            cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:2697798/140‑1 (MQ=255)

            cTGATACAGTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:3045914/140‑1 (MQ=255)

              gATACAGTGGATAAGCTTGTGCCGGATAGTACGGCTAGCATAATCCTGACCCGGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACt                                                                                                                             <  2:2672483/140‑1 (MQ=255)

               aTACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACtg                                                                                                                            >  1:849093/1‑140 (MQ=255)

                     tGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGtgat                                                                                                                      >  2:1432060/1‑140 (MQ=255)

                          aaGCTTGTGCCGGATAGTACGGGTAGCCGAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGACATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:3071373/140‑1 (MQ=255)

                          aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:227016/140‑1 (MQ=255)

                          aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 >  1:2408486/1‑140 (MQ=255)

                          aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:188643/140‑1 (MQ=255)

                          aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:124557/140‑1 (MQ=255)

                          aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:1058619/140‑1 (MQ=255)

                              ttGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGTTAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGACCGtttt                                                                                                             >  2:1755314/1‑140 (MQ=255)

                              ttGTGCCGGATAGTACGGGTAGCATAATCCTGAACCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGtttt                                                                                                             >  2:1634386/1‑140 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            >  1:2212533/1‑140 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:1936501/140‑1 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  2:2408486/140‑1 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:643508/140‑1 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:2560889/140‑1 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            >  1:1521053/1‑140 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:1420492/140‑1 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            >  1:1102788/1‑140 (MQ=255)

                               tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:101618/140‑1 (MQ=255)

                               tgtgCCGGATAGCACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  2:2036978/140‑1 (MQ=255)

                                 tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttctt                                                                                                          >  1:1039228/1‑140 (MQ=255)

                                 tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttctt                                                                                                          >  1:2078801/1‑140 (MQ=255)

                                 tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttctt                                                                                                          >  1:2095521/1‑140 (MQ=255)

                                 tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACGGTGTGATGAACGTTttctt                                                                                                          >  1:280971/1‑140 (MQ=255)

                                      gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:3019741/1‑140 (MQ=255)

                                      gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:1755285/1‑140 (MQ=255)

                                      gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:48587/1‑140 (MQ=255)

                                      gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     <  1:781155/140‑1 (MQ=255)

                                              gggTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGcc                                                                                             <  2:1014821/140‑1 (MQ=255)

                                               ggTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCt                                                                                            <  2:668977/140‑1 (MQ=255)

                                                gTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGACCGTTTTCTTCTTCCATACCGCCtc                                                                                           >  2:1845899/1‑139 (MQ=255)

                                                gTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTa                                                                                           <  2:2443181/140‑1 (MQ=255)

                                                      tAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTg                                                                                     <  2:1387231/140‑1 (MQ=255)

                                                           cTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGcc                                                                                <  2:905771/140‑1 (MQ=255)

                                                            tGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCt                                                                               <  2:2391870/140‑1 (MQ=255)

                                                              agccTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             <  2:2823923/138‑1 (MQ=255)

                                                              aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGTAACTGTGTGATGAACGTTTTCTTCTTCCATACCGACTACCTATGGCGCAttt                                                                             >  2:1495229/1‑140 (MQ=255)

                                                              aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             >  1:399612/1‑140 (MQ=255)

                                                              aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             >  2:624816/1‑140 (MQ=255)

                                                              aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCATACCTCTGGCGCCttt                                                                             >  2:1294316/1‑140 (MQ=255)

                                                                 cttgaagaaTTGGTGAAACATGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGTCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGc                                                                          <  2:1521890/137‑1 (MQ=255)

                                                                 cTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGc                                                                          <  2:2872447/140‑1 (MQ=255)

                                                                   ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCTGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:2352867/1‑140 (MQ=255)

                                                                   ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:2314842/1‑140 (MQ=255)

                                                                   ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:573266/1‑140 (MQ=255)

                                                                   ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  2:2174685/1‑140 (MQ=255)

                                                                   ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:802149/1‑140 (MQ=255)

                                                                   ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:685166/1‑140 (MQ=255)

                                                                     aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCatat                                                                      <  2:2973819/140‑1 (MQ=255)

                                                                     aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCatat                                                                      <  2:1869003/140‑1 (MQ=255)

                                                                     aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCatat                                                                      <  1:1432060/140‑1 (MQ=255)

                                                                     aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCGACCTCTGGCGCCTTTGGCatat                                                                      <  1:1188533/140‑1 (MQ=255)

                                                                         aTTGGTGAAACAGGAACCGGACATGGACCGAAATGAGCCTGTTAATGATGATAAGGCTGAACAGCCGGCATATTCGTAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTTCCTCTGGCGCCTTTGGCATATTAgg                                                                  <  2:2340261/140‑1 (MQ=255)

                                                                                  aCAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCgg                                                         >  1:238374/1‑140 (MQ=255)

                                                                                       aaacgcaCATGGCACGAAATGAGCCGGATAATTATGATAAGGCTGAACAGCCGGCATATTCGGATCTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCATTTGGCATATTAGGCATTTTCGGATAAt                                                    <  1:1491838/134‑1 (MQ=255)

                                                                                       aaCCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAAt                                                    >  1:2447706/1‑140 (MQ=255)

                                                                                       aaCCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAAt                                                    >  1:93040/1‑140 (MQ=255)

                                                                                                tGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCAtttt                                           <  2:1341105/140‑1 (MQ=255)

                                                                                                tGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCAtttt                                           <  2:2208924/140‑1 (MQ=255)

                                                                                                gggCACGAAATGAGCCGGATAATGATGATAAGGCTGAACCGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCGTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCAtttt                                           <  2:2758964/139‑1 (MQ=255)

                                                                                                 ggCACGAAATGAGCCGGATAATGATGATAATGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATCATTTGCATTTTc                                          >  1:3663/1‑140 (MQ=255)

                                                                                                     cGAAATGATCCGGATAATGATGATAAGGCTGAAGATGCTGCATATTCGGAACTGTGTGTTGTTCGTTTTCTTCTTCCTTAGCGGATACATCTGGCGCCTTTGTCATATTAGGCATATTCGGATAATTTGCATTTTGCata                                      <  2:2312229/140‑1 (MQ=255)

                                                                                                      gAAATGAGCCGGATAATGATGATATGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:2473120/140‑1 (MQ=255)

                                                                                                      gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:1634487/140‑1 (MQ=255)

                                                                                                      gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  2:5515/140‑1 (MQ=255)

                                                                                                      gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:895341/140‑1 (MQ=255)

                                                                                                            aGCCGGATAATGATGATAAGGCTGAACCGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCa                               <  1:1394841/140‑1 (MQ=255)

                                                                                                              ccGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATa                             <  2:758753/140‑1 (MQ=255)

                                                                                                                ggATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGc                           <  1:2624230/140‑1 (MQ=255)

                                                                                                                ggATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATAGTCGGATAATTTGCATTTTCCATATTACTCATAGc                           >  1:2944123/1‑140 (MQ=255)

                                                                                                                 gATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGcc                          >  1:1709504/1‑140 (MQ=255)

                                                                                                                 gATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGcc                          >  1:1819335/1‑140 (MQ=255)

                                                                                                                  aTAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGcct                         >  2:2171520/1‑140 (MQ=255)

                                                                                                                  aTAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCAATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGcct                         >  2:369324/1‑140 (MQ=255)

                                                                                                                   tAATGATGAGAAGGCGGAACAGCCGGCCTATTCGGAACGGTGTGATGAACGTTGTCTTCGTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGcctc                        <  1:1852132/140‑1 (MQ=255)

                                                                                                                           atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  1:15849/1‑140 (MQ=255)

                                                                                                                           atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  2:1587975/1‑140 (MQ=255)

                                                                                                                           atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  1:2779961/1‑140 (MQ=255)

                                                                                                                           atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  1:2996618/1‑140 (MQ=255)

                                                                                                                           atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCACCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  2:256492/1‑140 (MQ=255)

                                                                                                                               ggCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGaaa            >  1:532730/1‑140 (MQ=255)

                                                                                                                                    aaCAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGAt       >  1:1801211/1‑140 (MQ=255)

                                                                                                                                       aGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCtt    <  2:399612/140‑1 (MQ=255)

                                                                                                                                         ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTgg  >  2:1131791/1‑140 (MQ=255)

GTATCCATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGG  >  NZ_CP034943/2653532‑2653808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.