BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 2653669	231 (1.290)	5 (0.030) +CGGCAT	4/228	NT	2.1%	coding (598/1161 nt)	safA	spore coat assembly protein SafA
*	?	NZ_CP034943	2653670 =	240 (1.280)	5 (0.030) +CGGCAT	4/228	NT	2.1%	coding (597/1161 nt)	safA	spore coat assembly protein SafA
Rejected: Frequency below/above cutoff threshold.

Only 100 of 248 total aligned reads displayed.

ATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGG  >  NZ_CP034943/2653538‑2653808

 tgtgGCTGATACATTGGATCAGCTTGTGCCTGATAGTACGGGTAGCATAATCCTGACCCGGGACGACTTGGTGAAACAGGAACCGGACATGGCACGAATTGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATAtt                                                                                                                                    >  2:1518403/1‑140 (MQ=255)

 tgtgGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATAtt                                                                                                                                    <  1:576801/140‑1 (MQ=255)

   tgGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCg                                                                                                                                  <  1:2250640/140‑1 (MQ=255)

     gCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGa                                                                                                                                >  1:1848192/1‑140 (MQ=255)

     gCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGa                                                                                                                                >  2:2928342/1‑140 (MQ=255)

     gCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGa                                                                                                                                >  2:363959/1‑140 (MQ=255)

      cTGATACCTTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:1784708/140‑1 (MQ=255)

      cTGATACATTGGATAATCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:1938078/140‑1 (MQ=255)

      cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:1647760/140‑1 (MQ=255)

      cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:147845/140‑1 (MQ=255)

      cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:1291517/140‑1 (MQ=255)

      cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:2697798/140‑1 (MQ=255)

      cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:2402628/140‑1 (MQ=255)

      cTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAAAAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  2:647334/140‑1 (MQ=255)

        gATACAGTGGATAAGCTTGTGCCGGATAGTACGGCTAGCATAATCCTGACCCGGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACt                                                                                                                             <  2:2672483/140‑1 (MQ=255)

         aTACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACtg                                                                                                                            >  1:849093/1‑140 (MQ=255)

               tGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGtgat                                                                                                                      >  1:2147940/1‑140 (MQ=255)

               tGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATCAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGtgat                                                                                                                      >  2:2315454/1‑140 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGACCCGGACATGGCACGAAATGAGCCGGATAATGATGATATGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 >  2:1364541/1‑140 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:188643/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:124481/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:2693744/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:2426013/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:227016/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  2:2864580/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:1272427/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:1362147/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:1058619/140‑1 (MQ=255)

                    aaGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACg                                                                                                                 <  1:1047741/140‑1 (MQ=255)

                         tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            >  1:1102788/1‑140 (MQ=255)

                         tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:101618/140‑1 (MQ=255)

                         tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  1:2560889/140‑1 (MQ=255)

                         tgtgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttc                                                                                                            <  2:3045053/140‑1 (MQ=255)

                           tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               <  1:152287/119‑1 (MQ=255)

                           tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               >  2:152287/1‑119 (MQ=255)

                           tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttctt                                                                                                          >  1:5515/1‑140 (MQ=255)

                           tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttctt                                                                                                          >  1:2463989/1‑140 (MQ=255)

                           tgCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTttctt                                                                                                          >  1:2095521/1‑140 (MQ=255)

                               tacggatagcataatcctgatcctggaagaattggcgaaacaggcaccggacacggtacgaaatgagccggataatgataataaggctgaacagccggcatCGGCATATTCGGAACTGTGTGATGAACGTTttcctcttc                                                                                                      >  1:311690‑M2/102‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:1681371/1‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:1419944/1‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:48587/1‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  2:219213/1‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:1755285/1‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     >  1:1854595/1‑140 (MQ=255)

                                gATAGTACGGGTAGCATAATCCTGACACTTGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTcc                                                                                                     <  1:2801834/140‑1 (MQ=255)

                                 aTAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCa                                                                                                    >  1:2872447/1‑140 (MQ=255)

                                 aTAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCa                                                                                                    >  2:38866/1‑140 (MQ=255)

                                        gggTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAAAAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGcc                                                                                             <  1:663251/140‑1 (MQ=255)

                                          gTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGACCGTTTTCTTCTTCCATACCGCCtc                                                                                           >  2:1845899/1‑139 (MQ=255)

                                          gTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTa                                                                                           <  2:2443181/140‑1 (MQ=255)

                                          gTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTa                                                                                           >  1:2973819/1‑140 (MQ=255)

                                                     cTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGcc                                                                                <  2:905771/140‑1 (MQ=255)

                                                      tGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCt                                                                               <  2:2391870/140‑1 (MQ=255)

                                                        aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGaa                                                                                                                               >  1:2856941/1‑90 (MQ=255)

                                                        aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             >  1:1433009/1‑140 (MQ=255)

                                                        aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             >  2:691428/1‑140 (MQ=255)

                                                        aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             >  1:517814/1‑140 (MQ=255)

                                                        aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttt                                                                             >  1:399612/1‑140 (MQ=255)

                                                        aCCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATAATCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACATCTGGCGCCttt                                                                             >  2:2173160/1‑140 (MQ=255)

                                                        aCCCTGGAAGAAGTGGTGAAACGGGAACCGGACCTGGGACGAACTGAGCCGGATCATGATGATAAGGCTGAGCAGCCGGCATATTCGGAAGTGTGTGTTGAAGGTTTTCTTCTTCGCGCCCGCCTACCGCTGgcgcggat                                                                             >  2:11590/1‑136 (MQ=255)

                                                          ccTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCttttg                                                                           <  1:2400251/140‑3 (MQ=255)

                                                           cTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGc                                                                          <  2:3058795/140‑1 (MQ=255)

                                                             ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCTGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:2352867/1‑140 (MQ=255)

                                                             ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:2314841/1‑140 (MQ=255)

                                                             ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  1:685166/1‑140 (MQ=255)

                                                             ggAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCat                                                                        >  2:2223277/1‑140 (MQ=255)

                                                              gaagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCata                                                                       <  2:2157392/140‑1 (MQ=255)

                                                               aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCatat                                                                      <  2:402359/140‑1 (MQ=255)

                                                               aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCatat                                                                      <  2:1003742/140‑1 (MQ=255)

                                                               aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCatat                                                                      <  2:1869003/140‑1 (MQ=255)

                                                               aagaaTTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCGACCTCTGGCGCCTTTGGCatat                                                                      <  1:1188533/140‑1 (MQ=255)

                                                                   aTTGGTTAAACAGGAACCGGACATTGCACGAAATGAGCATGATAATGATGATAAGGCTGAAGAGCCGGCATATTCTGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAgg                                                                  <  1:2010984/140‑1 (MQ=255)

                                                                   aTTGGTGAAACAGGAACCGGACATGGACCGAAATGAGCCTGTTAATGATGATAAGGCTGAACAGCCGGCATATTCGTAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTTCCTCTGGCGCCTTTGGCATATTAgg                                                                  <  2:2340261/140‑1 (MQ=255)

                                                                                 aaacgcaCATGGCACGAAATGAGCCGGATAATTATGATAAGGCTGAACAGCCGGCATATTCGGATCTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCATTTGGCATATTAGGCATTTTCGGATAAt                                                    <  1:1491838/134‑1 (MQ=255)

                                                                                 aaCCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAAt                                                    >  1:93040/1‑140 (MQ=255)

                                                                                          tGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCAtttt                                           <  2:1341105/140‑1 (MQ=255)

                                                                                          gggCACGAAATGAGCCGGATAATGATGATAAGGCTGAACCGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCGTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCAtttt                                           <  2:2758964/139‑1 (MQ=255)

                                                                                           ggCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTc                                          >  1:774034/1‑140 (MQ=255)

                                                                                               cGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCata                                      <  1:2494991/140‑1 (MQ=255)

                                                                                               cGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCata                                      <  1:2383583/140‑1 (MQ=255)

                                                                                               cGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCata                                      <  1:810197/140‑1 (MQ=255)

                                                                                                gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:3054836/140‑1 (MQ=255)

                                                                                                gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     >  2:585638/1‑140 (MQ=255)

                                                                                                gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:895341/140‑1 (MQ=255)

                                                                                                gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:1634487/140‑1 (MQ=255)

                                                                                                gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:205850/140‑1 (MQ=255)

                                                                                                gAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCatat                                     <  1:369647/140‑1 (MQ=255)

                                                                                                      aGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTATGCATATTCGGATAATTTGCATTTTCCATATTACTCa                               >  2:2009784/1‑140 (MQ=255)

                                                                                                        ccGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATa                             <  2:1024445/140‑1 (MQ=255)

                                                                                                            aTAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCata                                      >  2:1428667/1‑127 (MQ=255)

                                                                                                            aTAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCata                                      <  1:1428667/127‑1 (MQ=255)

                                                                                                                     atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  1:15849/1‑140 (MQ=255)

                                                                                                                     atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  2:1598685/1‑140 (MQ=255)

                                                                                                                     atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  1:2996618/1‑140 (MQ=255)

                                                                                                                     atAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCACCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTtgtg                >  2:256492/1‑140 (MQ=255)

                                                                                                                         ggCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCt                                                                               <  1:78642/73‑1 (MQ=255)

                                                                                                                         ggCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCt                                                                               >  2:78642/1‑73 (MQ=255)

                                                                                                                              aaCAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGCCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGAt       >  1:1801225/1‑140 (MQ=255)

                                                                                                                                   ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATGCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTgg  >  2:2809002/1‑140 (MQ=255)

ATGTGGCTGATACATTGGATAAGCTTGTGCCGGATAGTACGGGTAGCATAATCCTGACCCTGGAAGAATTGGTGAAACAGGAACCGGACATGGCACGAAATGAGCCGGATAATGATGATAAGGCTGAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGG  >  NZ_CP034943/2653538‑2653808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.