New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 3487378155 (0.590)6 (0.020) 3/250 NT 3.8% intergenic (‑36/‑473) tagD/EO946_RS17965 glycerol‑3‑phosphate cytidylyltransferase/WecB/TagA/CpsF family glycosyltransferase
?NZ_CP034943 3487388 = 149 (0.580)intergenic (‑46/‑463) tagD/EO946_RS17965 glycerol‑3‑phosphate cytidylyltransferase/WecB/TagA/CpsF family glycosyltransferase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 176 total aligned reads displayed.

AATCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCAT  >  NZ_CP034943/3487239‑3487508
                                                                                                                                           |                                                                                                                                  
aaTCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGA                                                                                                                                    >  2:950109‑M1/1‑140 (MQ=255)
aaTCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGA                                                                                                                                    >  2:2673580‑M1/1‑140 (MQ=255)
  tCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGt                                                                                                                                  >  2:1526011/1‑140 (MQ=255)
  tCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGt                                                                                                                                  >  2:3328970/1‑140 (MQ=255)
  tCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGGCCGTAGTGAAATAAATCAAATGTTCCGTACGGTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTGCAACTGAGAGt                                                                                                                                  >  2:2564954/1‑140 (MQ=255)
     tACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTAcc                                                                                                                               >  2:3496743/1‑140 (MQ=255)
     tACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTAcc                                                                                                                               >  2:1841538/1‑140 (MQ=255)
     tACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTAcc                                                                                                                               >  2:2365312/1‑140 (MQ=255)
     tACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTAcc                                                                                                                               >  2:534129/1‑140 (MQ=255)
     tACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTAcc                                                                                                                               >  2:428560/1‑140 (MQ=255)
          ttAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTACCAACCCTTTTCAACTGAGAGTACCAGaaa                                                                                                                          >  2:4256516/1‑140 (MQ=255)
            aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                        >  2:3333342/1‑140 (MQ=255)
            aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                        >  2:788582/1‑140 (MQ=255)
            aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                        >  1:2155130/1‑140 (MQ=255)
            aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                        >  1:2661809/1‑140 (MQ=255)
                 aTCACCCAGATTTTTCGCTCTTTCCACAAGCTTCATAGGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCAGTAGATAACACCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaacca                                                                                                                   <  1:1662577/140‑1 (MQ=255)
                  tCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaaccaa                                                                                                                  >  1:3792077/1‑140 (MQ=255)
                   cACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaaccaaa                                                                                                                 <  1:4126653/140‑1 (MQ=255)
                   cACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaaccaaa                                                                                                                 <  1:2330792/140‑1 (MQ=255)
                    aCCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaaccaaaa                                                                                                                >  1:146378/1‑140 (MQ=255)
                    aCCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaaccaaaa                                                                                                                >  1:1986238/1‑140 (MQ=255)
                               tCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGa                                                                                                     <  1:3865932/140‑1 (MQ=255)
                                 gcactTTCCAGAAGCTTCATCTGTCCGTAGTGAAATAAATCAACTGGTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGCTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATc                                                                                                   <  1:1021770/137‑1 (MQ=255)
                                 gCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATc                                                                                                   <  2:3784536/140‑1 (MQ=255)
                                     tttCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGttt                                                                                               <  1:4079862/140‑1 (MQ=255)
                                               cTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGa                                                                                     >  2:1511077/1‑140 (MQ=255)
                                               cTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAAAAGATCTTTTATAATTTcta                                                                                     >  2:2951936/1‑138 (MQ=255)
                                                ttCATATGTCCGTAGTTAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGAc                                                                                    <  1:228558/140‑1 (MQ=255)
                                                ttCATAGGACCGTAGTCAAAAACATCAACTGGTCCGTACGTTATCACTATCTTCATTAGATCACAACACCTTCCAACCGTTGTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATGGTTTATAATTTCGAc                                                                                    <  1:1554311/140‑1 (MQ=255)
                                                 tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                   <  1:1526011/140‑1 (MQ=255)
                                                 tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                   >  2:851696/1‑140 (MQ=255)
                                                 tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                   >  2:4007933/1‑140 (MQ=255)
                                                        tCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAAACAAAAACCTTAACAGATCGTTTATAATTTCGACATAttttt                                                                            >  2:172272/1‑140 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGa                                                                                                     <  2:1853051/113‑1 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                          >  2:2383264/1‑140 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                          >  2:2747407/1‑140 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                          >  1:4228799/1‑140 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                          >  2:476371/1‑140 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                          >  1:2807045/1‑140 (MQ=255)
                                                          cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTAGACATAtttttga                                                                          >  2:2624507/1‑138 (MQ=255)
                                                            tAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACg                                                                        >  1:2981225/1‑140 (MQ=255)
                                                            tAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACg                                                                        >  1:1001112/1‑140 (MQ=255)
                                                             attGAAATAAATCAAATGTTCATTACGTTATCACTTTCTTCTTTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       <  1:2511925/138‑1 (MQ=255)
                                                             aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACCGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       <  2:1775927/140‑1 (MQ=255)
                                                             aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       <  2:2215403/140‑1 (MQ=255)
                                                             aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       <  1:3458175/140‑1 (MQ=255)
                                                             aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAAACGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       <  2:2993637/140‑1 (MQ=255)
                                                             aGTGAAAAAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       <  1:618775/140‑1 (MQ=255)
                                                                 aaataaatCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCa                                                                   >  1:2257509/1‑140 (MQ=255)
                                                                 aaataaatCAAACATTCCGTACG‑TATCACTTTCTTCATTAGATAACATCACCTTCCAACCTTTTCCAACTTAGAaaaaacaaaaatccttaactgattgtttatcatttcgacatattttttacgttccattaataa                                                                     <  2:1210105‑M1/137‑64 (MQ=255)
                                                                 aaataaatCAAACATTCCGTACG‑TATCACTTTCTTCATTAGATAACATCACCTTCCAACCTTTTCCAACTTAGAaaaaacaaaaatccttaactgattgtttatcatttcgacatattttttacgttccattaataa                                                                     >  1:1210105‑M1/1‑74 (MQ=255)
                                                                  aataaatCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGATTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCAt                                                                  <  2:658471/140‑1 (MQ=255)
                                                                  aataaatCAAATGTTCCGTACGGTATCACTTTCTTCATTAGATAACATCACCTTCCACCCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCAt                                                                  <  2:3497529/140‑1 (MQ=255)
                                                                  aataaatCAAATGTTCCGTAAGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCAt                                                                  <  2:3708859/140‑1 (MQ=255)
                                                                        tCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATtaataa                                                            <  1:1250354/140‑1 (MQ=255)
                                                                          aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCATAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                          <  2:3363196/140‑1 (MQ=255)
                                                                          aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                          <  2:2159148/140‑1 (MQ=255)
                                                                          aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                          <  1:950109/140‑1 (MQ=255)
                                                                           aaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGa                                                         >  2:3412075/1‑140 (MQ=255)
                                                                            aTGTTCCGTACTTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGaa                                                        <  2:2554755/140‑1 (MQ=255)
                                                                             tGTTCCGTACGTTATCACTTTAGTCCTTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTGTATAATTTCGACATATTTTTTACGTACCATTAATAATGAAc                                                       <  2:4158230/140‑1 (MQ=255)
                                                                                tCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACaat                                                    <  1:752235/140‑1 (MQ=255)
                                                                                  cGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACaataa                                                  <  2:3178227/140‑1 (MQ=255)
                                                                                  cGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACaataa                                                  <  1:3333342/140‑1 (MQ=255)
                                                                                   gTACGTTATCACTTTCTACATTATATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACactaat                                                 <  2:3492566/140‑1 (MQ=255)
                                                                                         tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                       >  2:3826756/1‑112 (MQ=255)
                                                                                         tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATa                                           >  1:1587858/1‑140 (MQ=255)
                                                                                         tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATa                                           >  1:4316893/1‑140 (MQ=255)
                                                                                           tCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAg                                         >  2:1108315/1‑140 (MQ=255)
                                                                                            cACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                        <  2:1202059/140‑1 (MQ=255)
                                                                                            cACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                        <  1:1682632/140‑1 (MQ=255)
                                                                                            cACTTTCTTCATTAGATAACATCACCTTCAAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                        <  2:263358/140‑1 (MQ=255)
                                                                                                 tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATTAACAATAATAGCATAAGTTCCta                                   >  1:2822476/1‑140 (MQ=255)
                                                                                                 tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                   >  1:1982534/1‑140 (MQ=255)
                                                                                                 tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                   >  1:1379113/1‑140 (MQ=255)
                                                                                                 tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                   >  2:112905/1‑140 (MQ=255)
                                                                                                 tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                   >  1:1104430/1‑140 (MQ=255)
                                                                                                 tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGAATAACTTCCta                                   >  1:1667619/1‑140 (MQ=255)
                                                                                                   ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                 <  1:1527550/140‑1 (MQ=255)
                                                                                                   ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                 <  1:1287985/140‑1 (MQ=255)
                                                                                                   ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                 <  1:2932827/140‑1 (MQ=255)
                                                                                                   ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                 <  1:851696/140‑1 (MQ=255)
                                                                                                   ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                 <  2:1379113/140‑1 (MQ=255)
                                                                                                   ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTAGACATATTTTTTACGTAACATTAATAATGAACAATAATAGCATAAGTTGCtata                                 >  2:2560333/1‑140 (MQ=255)
                                                                                                       ttAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAg                             >  1:3199832/1‑140 (MQ=255)
                                                                                                             aaCATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAgg                       <  2:1560988/140‑1 (MQ=255)
                                                                                                             aaCATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAAAAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATATAATAAGTTCCTATAAAATTTaatg                       >  2:1821352/1‑138 (MQ=255)
                                                                                                               cATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGct                     >  1:2407671/1‑140 (MQ=255)
                                                                                                               cATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATGTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGct                     >  1:555030/1‑140 (MQ=255)
                                                                                                                    ccTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAATCCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGGTATGGCTCTTTa                >  1:3962808/1‑140 (MQ=255)
                                                                                                                    ccTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATCTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTa                >  1:1888323/1‑140 (MQ=255)
                                                                                                                     cTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaa               >  2:1295993/1‑140 (MQ=255)
                                                                                                                     cTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGAGCGTTTATACTTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaa               <  2:1718166/140‑1 (MQ=255)
                                                                                                                       tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaaaa             >  2:2202510/1‑140 (MQ=255)
                                                                                                                       tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaaaa             >  2:63594/1‑140 (MQ=255)
                                                                                                                       tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaaaa             >  2:3400932/1‑140 (MQ=255)
                                                                                                                       tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGATCTTTaaaa             >  2:291650/1‑140 (MQ=255)
                                                                                                                       tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCGTTACAGATCGTTTTAAATTTACGCAAAATTTTTACGTAACATTTATAAATAACAAGAATAGCATAAGTTACTATAAAAATTAAGGCAGTTTaaaa             >  2:1989728/1‑140 (MQ=255)
                                                                                                                             cGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTaa       <  2:1767904/140‑1 (MQ=255)
                                                                                                                                  tCAACTGAGAGTACCATAAAAAAACAAAAAACATTAACAGATCGTTTATAATTTCGACATAATTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAatcat  <  2:2701870/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                  
AATCCTACGATTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCAT  >  NZ_CP034943/3487239‑3487508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.