New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 3487378155 (0.590)6 (0.020) 3/250 NT 3.8% intergenic (‑36/‑473) tagD/EO946_RS17965 glycerol‑3‑phosphate cytidylyltransferase/WecB/TagA/CpsF family glycosyltransferase
?NZ_CP034943 3487388 = 149 (0.580)intergenic (‑46/‑463) tagD/EO946_RS17965 glycerol‑3‑phosphate cytidylyltransferase/WecB/TagA/CpsF family glycosyltransferase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 175 total aligned reads displayed.

TTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCATCAGCATTTTTTGGTATCAA  >  NZ_CP034943/3487249‑3487527
                                                                                                                                           |                                                                                                                                           
ttAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTACCAACCCTTTTCAACTGAGAGTACCAGaaa                                                                                                                                             >  2:4256516/1‑140 (MQ=255)
  aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                                           >  2:788582/1‑140 (MQ=255)
  aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                                           >  1:577153/1‑140 (MQ=255)
  aaGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaa                                                                                                                                           >  1:2661809/1‑140 (MQ=255)
   aGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGaaaaaa                                                                                                                                          >  2:477959/1‑140 (MQ=255)
       aTCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATCTGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaacca                                                                                                                                      <  2:3237642/140‑1 (MQ=255)
       aTCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaacca                                                                                                                                      <  1:1354624/140‑1 (MQ=255)
       aTCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGGTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaacca                                                                                                                                      <  2:833278/140‑1 (MQ=255)
       aTCACCCAGATTTTTCGCTCTTTCCACAAGCTTCATAGGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCAGTAGATAACACCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaacca                                                                                                                                      <  1:1662577/140‑1 (MQ=255)
        tCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAaaaaaccaa                                                                                                                                     >  2:1287985/1‑140 (MQ=255)
                       gcactTTCCAGAAGCTTCATCTGTCCGTAGTGAAATAAATCAACTGGTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGCTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATc                                                                                                                      <  1:1021770/137‑1 (MQ=255)
                           tttCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGttt                                                                                                                  <  1:358795/140‑1 (MQ=255)
                           tttCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGttt                                                                                                                  <  1:4079862/140‑1 (MQ=255)
                                     cTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGa                                                                                                        >  1:1610864/1‑140 (MQ=255)
                                     cTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAAAAGATCTTTTATAATTTcta                                                                                                        >  2:2951936/1‑138 (MQ=255)
                                      ttCATATGTCCGTAGTTAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGAc                                                                                                       <  1:228558/140‑1 (MQ=255)
                                       tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                                      >  1:4093220/1‑140 (MQ=255)
                                       tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                                      >  2:1527550/1‑140 (MQ=255)
                                       tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                                      <  1:1526011/140‑1 (MQ=255)
                                       tCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACa                                                                                                      >  2:1109838/1‑140 (MQ=255)
                                              tCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAAACAAAAACCTTAACAGATCGTTTATAATTTCGACATAttttt                                                                                               >  2:172272/1‑140 (MQ=255)
                                               ccGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACGTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATAtttttt                                                                                              >  2:182964/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACATATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  2:376567/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGa                                                                                                                        >  1:1853051/1‑113 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGa                                                                                                                        <  2:1853051/113‑1 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  1:451675/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  1:4228799/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  2:1367006/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  2:1819467/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  2:2383022/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  1:2807045/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTa                                                                                             >  2:476371/1‑140 (MQ=255)
                                                cGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTAGACATAtttttga                                                                                             >  2:2624507/1‑138 (MQ=255)
                                                 tcatatgtccatagtgaaataaatcaaacattccgtacgtatcactttcttcattagataacatcaccttccaaccttttccaacttagaAAAAACAAAAATCCTTAACTGATTGTTTATCATTTCGACATATTTTTTAc                                                                                            >  1:1402399‑M2/91‑140 (MQ=255)
                                                 tcatatgtccatagtgaaataaatcaaacattccgtacgtatcactttcttcattagataacatcaccttccaaccttttccaacttagaAAAAACAAAAATCCTTAACTGATTGTTTATCATTTCGACATATTTTTTAc                                                                                            >  1:1535649‑M2/91‑140 (MQ=255)
                                                  tAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACg                                                                                           >  1:2981225/1‑140 (MQ=255)
                                                  tAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACg                                                                                           >  1:1001112/1‑140 (MQ=255)
                                                  tAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACg                                                                                           >  1:2280457/1‑140 (MQ=255)
                                                   tttGAAATAAATCAAATGTTCCTTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  2:3405283/138‑1 (MQ=255)
                                                   aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  2:2771512/140‑1 (MQ=255)
                                                   aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  1:1680306/140‑1 (MQ=255)
                                                   aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  2:2215403/140‑1 (MQ=255)
                                                   aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  1:3458175/140‑1 (MQ=255)
                                                   aGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAAACGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  2:2993637/140‑1 (MQ=255)
                                                   aGTGAAATAAATCAAATGTTCCCTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  2:1775906/140‑1 (MQ=255)
                                                   aGTGAAAAAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  1:618775/140‑1 (MQ=255)
                                                       aaataaatCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCa                                                                                      >  1:1560988/1‑140 (MQ=255)
                                                              tCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATtaataa                                                                               <  1:1250354/140‑1 (MQ=255)
                                                                aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCATAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                                             <  2:3363196/140‑1 (MQ=255)
                                                                aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                                             <  1:1511077/140‑1 (MQ=255)
                                                                aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                                             <  1:950109/140‑1 (MQ=255)
                                                                aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                                             <  2:2159148/140‑1 (MQ=255)
                                                                aaaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCAAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                                             <  1:2951936/140‑1 (MQ=255)
                                                                aaaTGTTCCGTACGTTATAACTTTCTTCATTAGATAACATCACCTTCAAACCGTTTTCAACCGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATg                                                                             <  2:1719699/140‑1 (MQ=255)
                                                                 aaataaatcaaacattccgtacgtatcactttcttcattagataacatcaccttccaaccttttccaacttagaAAAAACAAAAATCCTTAACTGATTGTTTATCATTTCGACATATTTTTTACGTTCCATtaataa                                                                               <  2:1209877‑M2/63‑1 (MQ=255)
                                                                 aaataaatcaaacattccgtacgtatcactttcttcattagataacatcaccttccaaccttttccaacttagaAAAAACAAAAATCCTTAACTGATTGTTTATCATTTCGACATATTTTTTACGTTCCATtaataa                                                                               >  1:1210105‑M2/75‑137 (MQ=255)
                                                                 aaTGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACTTACCATTAATAATGa                                                                            >  2:2932827/1‑140 (MQ=255)
                                                                  aTGTTCCGTACTTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGaa                                                                           <  2:2554755/140‑1 (MQ=255)
                                                                   tGTTCCGTACGTTATCACTTTAGTCCTTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTGTATAATTTCGACATATTTTTTACGTACCATTAATAATGAAc                                                                          <  2:4158230/140‑1 (MQ=255)
                                                                      tCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACaat                                                                       <  1:752235/140‑1 (MQ=255)
                                                                       ccGTACGTTATCACTTTCTTCATTAGATAACATAACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAATCCTTAACAGATCGTTTATAATATCGACATATTTTTTACGTACCATTAATAATGAACaata                                                                      >  2:861225/1‑140 (MQ=255)
                                                                        cGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACaataa                                                                     <  2:3178227/140‑1 (MQ=255)
                                                                         gTACGTTATCACTTTCTACATTATATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACactaat                                                                    <  2:3492566/140‑1 (MQ=255)
                                                                               tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          >  2:3826756/1‑112 (MQ=255)
                                                                               tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGt                                                                                          <  1:3826756/112‑1 (MQ=255)
                                                                               tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATa                                                              >  1:1907098/1‑140 (MQ=255)
                                                                               tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATa                                                              >  1:936237/1‑140 (MQ=255)
                                                                               tATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATAGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATa                                                              >  2:950763/1‑140 (MQ=255)
                                                                                 tCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAg                                                            >  2:1045367/1‑140 (MQ=255)
                                                                                  cACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                                           <  2:3965499/140‑1 (MQ=255)
                                                                                  cACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                                           <  2:1202059/140‑1 (MQ=255)
                                                                                  cACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                                           <  1:2431212/140‑1 (MQ=255)
                                                                                  cACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                                           <  2:1474086/140‑1 (MQ=255)
                                                                                  cACTTTCTTCATTAGATAACATCACCTTCAAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGt                                                           <  2:263358/140‑1 (MQ=255)
                                                                                       tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                                      >  1:1982534/1‑140 (MQ=255)
                                                                                       tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                                      >  1:3385427/1‑140 (MQ=255)
                                                                                       tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                                      >  1:2522724/1‑140 (MQ=255)
                                                                                       tcttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCta                                                      >  1:1104430/1‑140 (MQ=255)
                                                                                         ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                                    <  1:1287985/140‑1 (MQ=255)
                                                                                         ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                                    <  1:2212085/140‑1 (MQ=255)
                                                                                         ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCtata                                                    <  1:851696/140‑1 (MQ=255)
                                                                                         ttcATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTGTTCGTAACATTGATAATGAAGAAGACGAGCATAAGTTCCtata                                                    >  2:2562941/1‑140 (MQ=255)
                                                                                             ttAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAg                                                >  1:3199832/1‑140 (MQ=255)
                                                                                                 aTAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATACTATCAAAAGTTCCTATAAAAGTTaa                                            >  2:35263/1‑140 (MQ=255)
                                                                                                   aaCATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTACTATAAAAGTTAAgg                                          >  2:2441725/1‑140 (MQ=255)
                                                                                                   aaCATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTGACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGtgacgg                                          >  2:3331197/1‑135 (MQ=255)
                                                                                                          ccTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAATCCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGGTATGGCTCTTTa                                   >  1:3962808/1‑140 (MQ=255)
                                                                                                          ccTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTa                                   >  1:2835919/1‑140 (MQ=255)
                                                                                                           cTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaa                                  >  2:274039/1‑140 (MQ=255)
                                                                                                           cTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAAAAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaa                                  >  2:1710833/1‑140 (MQ=255)
                                                                                                             tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGACCAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaaaa                                >  2:3425639/1‑140 (MQ=255)
                                                                                                             tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTaaaa                                >  2:63594/1‑140 (MQ=255)
                                                                                                             tCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCGTTACAGATCGTTTTAAATTTACGCAAAATTTTTACGTAACATTTATAAATAACAAGAATAGCATAAGTTACTATAAAAATTAAGGCAGTTTaaaa                                >  2:1989728/1‑140 (MQ=255)
                                                                                                                     ttttCAACTGAGAGTACCATAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAAAGAACAATAATAGCATAAGTTCCTATAATAGTTAAGTCTCTTTAAAAATGTAAat                        >  2:2163318/1‑140 (MQ=255)
                                                                                                                     ttttCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAat                        >  1:2137731/1‑140 (MQ=255)
                                                                                                                        tCAACTGAGAGCACCAGAAAAAAACCAAACACCGTAACAGATCGTTTATAAGTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAatcat                     <  2:2701845/140‑1 (MQ=255)
                                                                                                                                        gAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCATCAGCATTTTTTGGTAt     <  2:749148/140‑1 (MQ=255)
                                                                                                                                          aAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCATCAGCATTTTTTGGTATCa   <  1:234366‑M2/139‑1 (MQ=255)
                                                                                                                                           aaaaaccaaaaaccTTACCAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATACAAGTTAAGGCTCTTTAAAAATGTAAATCATCAGCATTTTTTGGTATCaa  <  2:1907098/140‑1 (MQ=255)
                                                                                                                                           aaaaaccaaaaaccTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCATCAGCATTTTTTGGTATCaa  <  2:146378/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TTAAGTAATCACCCAGATTTTTCGCTCTTTCCAGAAGCTTCATATGTCCGTAGTGAAATAAATCAAATGTTCCGTACGTTATCACTTTCTTCATTAGATAACATCACCTTCCAACCGTTTTCAACTGAGAGTACCAGAAAAAAACCAAAAACCTTAACAGATCGTTTATAATTTCGACATATTTTTTACGTACCATTAATAATGAACAATAATAGCATAAGTTCCTATAAAAGTTAAGGCTCTTTAAAAATGTAAATCATCAGCATTTTTTGGTATCAA  >  NZ_CP034943/3487249‑3487527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.