| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 166199 = | 228 (1.560) | 4 (0.030) +A |
3/244 | NT | 1.8% | intergenic (+4/‑168) | EO946_RS00985/EO946_RS00990 | tRNA‑Ala/16S ribosomal RNA |
| ? | NZ_CP034943 | = 171201 | 220 (1.540) | intergenic (+18/‑167) | rrf/EO946_RS01005 | 5S ribosomal RNA/16S ribosomal RNA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTTAGTTTTCAAAGATCATTTCGTTTATTCGCTTTGTTAAAGCAACTTTATTAGTATACAACGCTGCTTCTTCAAAGTCAACAACTTTTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/166296‑166199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCCCCGACTACCATCGGCGCTGAAGAGCTTAACTTCCGTGTTCGGCATGGGAACGGGTGTGACCTCTTCGCTATCGCCACCAAACAAAT < NZ_CP034943/171201‑171063 | TGTTTAGTTTTCAAAGATCATTTTTTTTGTACGCTTTGTTAAAGCAACTTTATGAGTATACAATGTCACTTCTTCAAAGTCAATAACTTTTTTAAAAAATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCAC < 2:1581207/140‑1TGTTTAGTTTTCAAAGATCATTTTGTTTGTCCGCTTTGTTAAAGCAACTTTATTAGTATACAATGTCACTTCTTCAAAGTCAATAACTTTTTTAAAAAATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCAC < 2:973098/140‑1 AAAGATCATTTTGTTTGTCCGCTTTGTTAAAGCAACTTTATTAGTATACAATGTCACTTCTTCAAAGTCAATAACTTTTTTAAAAAATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCC > 1:533649/1‑140 atgtcaCTTCTTCAAAGTCAATAACTTTTTTAAAAAATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCCCCGACTACCATCGGCGCTGAAGAGCTTAACTTCCGTGTTCGGTATGGGAA < 2:533649/134‑1 ATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCCCCGACTACCATCGGCTCTGAAGAGCTTAACTTCCGTGTTCGGCATGGGAACGGGTGTGACCTATTCGCTATCGCCACCAAACAAAT < 2:967572/140‑1 ATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCCCCGACTACCATCGGCGCTGAAGAGCTTAACTTCCGTGTTCGGCATGGGAACGGGTGTGACCTCTTCGCTATCGCCACCAAACAAAT < 2:1393015/140‑1 ATTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCCCCGACTACCATCGGCGCTGAAGAGCTTAACTTCCGTGTTCGGCATGGGAACGGGTGTGACCTCTTCGCTATCGCCACCAAACAAAT < 2:319801/140‑1 | TGTTTAGTTTTCAAAGATCATTTCGTTTATTCGCTTTGTTAAAGCAACTTTATTAGTATACAACGCTGCTTCTTCAAAGTCAACAACTTTTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/166296‑166199‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTACACTAATGTGCAATTGCTTGGCGGCGTCCTACTCTCACAGGGGGAAACCCCCGACTACCATCGGCGCTGAAGAGCTTAACTTCCGTGTTCGGCATGGGAACGGGTGTGACCTCTTCGCTATCGCCACCAAACAAAT < NZ_CP034943/171201‑171063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |