BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 2653801	327 (1.280)	3 (0.010)	3/246	NT	0.94%	coding (466/1161 nt)	safA	spore coat assembly protein SafA
*	?	NZ_CP034943	2653808 =	314 (1.260)	3 (0.010)	3/246	NT	0.94%	coding (459/1161 nt)	safA	spore coat assembly protein SafA
Rejected: Frequency below/above cutoff threshold.

Only 100 of 347 total aligned reads displayed.

AACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGATACAC  >  NZ_CP034943/2653664‑2653939

  cAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCt                                                                                                                                        <  2:1167468/140‑1 (MQ=255)

  cAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCt                                                                                                                                        <  2:1975832/140‑1 (MQ=255)

     ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTgg                                                                                                                                     >  2:257828/1‑140 (MQ=255)

     ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTgg                                                                                                                                     >  1:2187368/1‑140 (MQ=255)

      cGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGt                                                                                                                                    >  2:3968759/1‑140 (MQ=255)

           tatTCGGCACGGTGTGAGGAAGGTTGTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATAATCGGATAATTTTCATTTTCCATATTACTCATACCCTCCTGTTGTGGAAAGTGATCTTGGTCTTGc                                                                                                                               <  2:1791884/140‑1 (MQ=255)

           tatTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGc                                                                                                                               <  1:2539742/140‑1 (MQ=255)

            atgcGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCa                                                                                                                              <  2:3260196/137‑1 (MQ=255)

            atTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCa                                                                                                                              <  2:2618047/140‑1 (MQ=255)

            atTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCa                                                                                                                              <  2:3103516/140‑1 (MQ=255)

              tCGTAAATGTGTTATGAACGTTTTCTTCTTCCATACCGACTACCTCTGGCGCCTTTGGCATATTAGGAATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAtg                                                                                                                            <  2:496591/140‑1 (MQ=255)

                cgAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAtgtg                                                                                                                          <  2:1053119/139‑1 (MQ=255)

                 gAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                         <  1:2450774/140‑1 (MQ=255)

                 gAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                         <  2:140824/140‑1 (MQ=255)

                 gAACTGTGTGATGAACGGTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATGTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                         <  2:2492313/140‑1 (MQ=255)

                      gtgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACat                                                                                                                    <  1:3505028/140‑1 (MQ=255)

                      gtgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACat                                                                                                                    <  2:2325179/140‑1 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATATCCTCCTGTTGTGGACATTGATCTTGGTCTTGCATGTGATACaga                                                                                                                   >  1:552155/1‑138 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                             <  2:4101768/130‑1 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                             >  1:4101768/1‑130 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  2:730811/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  1:4040252/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   <  2:1869818/140‑1 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  1:971679/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  1:2970285/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   <  1:4250773/140‑1 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   <  2:1701941/140‑1 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  2:3059484/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  1:774887/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  2:1119856/1‑140 (MQ=255)

                       tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   >  1:1968411/1‑140 (MQ=255)

                       tgtcATGAACGTTTTCTTATTCCATACCTCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATCTGAGTCATAGCCTCCTGTTGTGGAAATGGATCGGGGTCTTGCATGTGATACata                                                                                                                   >  1:1305114/1‑140 (MQ=255)

                       tcggatgaACGGTATCTTCTTCCATACCGCCGACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                   <  2:2240826/137‑1 (MQ=255)

                         tgatgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATg                                                                                                                 <  2:3648277/140‑1 (MQ=255)

                         tgatgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATg                                                                                                                 <  1:1818221/140‑1 (MQ=255)

                            tgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATc                                                                                                              >  2:1268989/1‑140 (MQ=255)

                            tgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATc                                                                                                              >  2:278485/1‑140 (MQ=255)

                               aCGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGAt                                                                                                                        >  2:2043688/1‑127 (MQ=255)

                                             cATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCatgat                                                                                             <  1:3018342/140‑1 (MQ=255)

                                               tACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGt                                                                                           >  2:2899205/1‑140 (MQ=255)

                                               tACCGCCTACCACTGGCGCCTTTGGCATATTAGGCCTATTCGGATAATTTGCATTTTCCATATTACGCCTAGACTACTGTTGTGGACATTGAGCTTGTTCTTGCATGTGATACATAGGATCCATATGTGCGTCATGATGt                                                                                           >  2:2721839/1‑140 (MQ=255)

                                                   gCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGttttt                                                                                       >  2:4250968/1‑140 (MQ=255)

                                                    ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTTGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                      >  2:4001701/1‑140 (MQ=255)

                                                    ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                      >  2:3218593/1‑140 (MQ=255)

                                                    ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                      >  2:4141838/1‑140 (MQ=255)

                                                    ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                      >  1:1037786/1‑140 (MQ=255)

                                                      tACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCg                                                                                    <  2:160762/140‑1 (MQ=255)

                                                          tctGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGctc                                                                                <  1:1413075/140‑1 (MQ=255)

                                                            tGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGctcct                                                                              <  2:910274/140‑1 (MQ=255)

                                                             ggCGCCTTTGGCATATGAGGCATATTCGAATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGGGGAAATTGATCTTGGTCTTGCATGTGATACATATGAACCATATTTCCGTCATGATGTTTTTTCGGctcctc                                                                             <  1:92300/140‑1 (MQ=255)

                                                              gcgcCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCtcctcc                                                                            <  1:3117441/140‑1 (MQ=255)

                                                              gcgcCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCtcctcc                                                                            >  1:2370598/1‑140 (MQ=255)

                                                              gcgcCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTGGTGGAAATTGAACTTGGTCTTGCATGTGATACATCTGATCCATATTTCCGTCAGGATGTGTTTTCGGCtcctcc                                                                            >  2:3862687/1‑140 (MQ=255)

                                                                  cTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGtt                                                                        <  1:278485/140‑1 (MQ=255)

                                                                  cTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGtt                                                                        <  1:12499/140‑1 (MQ=255)

                                                                  cTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGtt                                                                        <  1:3968759/140‑1 (MQ=255)

                                                                   tttGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGttt                                                                       <  1:2270311/140‑1 (MQ=255)

                                                                        cATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAgggg                                                                  <  1:1768994/140‑1 (MQ=255)

                                                                         atatTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATGCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAggggg                                                                 <  2:1622273/140‑1 (MQ=255)

                                                                            ttAGGCATATTCGGATAATTTGCATTTTCCAAATTACTCATAGACTCATGTTGTGGAACTTTgtcttgcatattagacatatgatccatatttccgtcatgattttttttcggctcctccggtttaggaggcgaccaagg                                                              >  2:794519‑M1/1‑62 (MQ=255)

                                                                             tAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGAc                                                             <  2:2613166/140‑1 (MQ=255)

                                                                              aGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGAcc                                                            <  2:3312147/140‑1 (MQ=255)

                                                                                    atTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGTCGACCAAGGCt                                                      >  2:800358/1‑140 (MQ=255)

                                                                                    atTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCt                                                      <  2:3398676/140‑1 (MQ=255)

                                                                                    atTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCt                                                      >  2:592656/1‑140 (MQ=255)

                                                                                     ttCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAACTTGATCTTGGTCTTGCATGTGATACATCTGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGGTTAGGGGGCGACCAAGGCTg                                                     >  2:2993342/1‑140 (MQ=255)

                                                                                     ttCGGATAATTTGCATTTTCCATATTACTCATAGCCGCCTGTTGTGGAAATTGgtcttgcatatgatacatatgatccatatttccgtcatgatgttttttcggctcctccggtttaggaggcgaccaaggctggaaaag                                                     >  1:3330516‑M1/1‑53 (MQ=255)

                                                                                         gATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGaaa                                                 <  2:3300786/140‑1 (MQ=255)

                                                                                         gATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGaaa                                                 <  2:1821943/140‑1 (MQ=255)

                                                                                           tAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTTGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAg                                               <  1:2687245/140‑1 (MQ=255)

                                                                                           tAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCGTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAg                                               <  1:3174664/140‑1 (MQ=255)

                                                                                           tAAGTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAg                                               <  2:354210/140‑1 (MQ=255)

                                                                                                 gCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGttt                                         <  2:3710956/140‑1 (MQ=255)

                                                                                                  cATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtc                                        >  1:1555125/1‑140 (MQ=255)

                                                                                                  cATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtc                                        >  1:3667394/1‑140 (MQ=255)

                                                                                                   aTTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtca                                       <  1:161751/140‑1 (MQ=255)

                                                                                                   aTTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtca                                       <  2:1516375/140‑1 (MQ=255)

                                                                                                      ttCCATATTACTCCTAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCGGGAAAAGCTGTTtcatat                                    <  2:2691085/140‑1 (MQ=255)

                                                                                                      ttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                    <  1:2108118/140‑1 (MQ=255)

                                                                                                      ttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCGCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                    <  1:648230/140‑1 (MQ=255)

                                                                                                      ttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATACATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                    <  2:2829870/140‑1 (MQ=255)

                                                                                                              tACTGATAGCCTCCTGTTGTGTAAATTGATCTTGGTCTTGCATTTGATACATATGATCCATATTTCCTTCATGTTGTTTTTTCGGCTCCTCCGTTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCAtaataa                            <  1:3805447/140‑1 (MQ=255)

                                                                                                              tACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCAtaataa                            <  1:1181041/140‑1 (MQ=255)

                                                                                                              tACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCAtaataa                            <  1:2854154/140‑1 (MQ=255)

                                                                                                              tACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCAtaataa                            <  1:257828/140‑1 (MQ=255)

                                                                                                                   aTAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGtt                       <  1:3220195/140‑1 (MQ=255)

                                                                                                                   aTAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGtt                       <  1:730811/140‑1 (MQ=255)

                                                                                                                   aTAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGtt                       >  1:3593766/1‑140 (MQ=255)

                                                                                                                        ctcctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACAt                  <  2:1224403/140‑1 (MQ=255)

                                                                                                                        ctcctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACAt                  <  2:2370598/140‑1 (MQ=255)

                                                                                                                        ctcctGTTGAGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACAt                  <  1:3868189/140‑1 (MQ=255)

                                                                                                                          cctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCa                >  1:185099/1‑140 (MQ=255)

                                                                                                                          cctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCa                >  1:1667651/1‑140 (MQ=255)

                                                                                                                              ttgtGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCTTCATGATGTTTTTTATTATCATACTTTTTTTGGGGCGACCAAGGCTGTAAAAGATTTTTCATATAATAATTATCGTTCACATcttgtt            <  2:833772/140‑6 (MQ=255)

                                                                                                                                gtgGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGGTCACATCAGCTTCa          <  2:1953836/140‑1 (MQ=255)

                                                                                                                                 tgGAAATTGATCTTGGTCTTGCATGTGATACATATTTTCCTTTGTTCGGTCATGTTGTTTTTTCGGCTCCTCCGGTTGAGGGGGCGCCCAAGGCTGGACAGGCTGTTTCATATCCTAATTATCGTTCACATCTGCTTctg         >  2:3451054/1‑138 (MQ=255)

                                                                                                                                      cgtggtattgcatgtgatacatttgatccatatttccgtcatgatgttttttcggctcctccggtttagggggcgcccaaggctggaaaagctgtttcatatcataataatcgttcacatcagcttcaggatacacatct    <  2:2091156‑M1/138‑137 (MQ=255)

                                                                                                                                       ttGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGATaca   <  1:2899205/140‑1 (MQ=255)

                                                                                                                                        tGgtcttgcatgtgatacatatgatccatatgtccgtcatgatgttttttcggctcctccggtttagggggcgaccaaggctggaaaagctgtttcatatcataataatcgttcacatcagcttcaggatacacatcttc  <  2:3925307‑M1/140‑139 (MQ=255)

                                                                                                                                        tGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGATacac  >  1:1524583/1‑140 (MQ=255)

AACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGATACAC  >  NZ_CP034943/2653664‑2653939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.