BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3376760	644 (1.420)	8 (0.020)	3/250	NT	1.3%	intergenic (‑125/+94)	trxB/cwlO	thioredoxin‑disulfide reductase/peptidoglycan DL‑endopeptidase CwlO
*	?	NZ_CP034943	3376771 =	607 (1.340)	8 (0.020)	3/250	NT	1.3%	intergenic (‑136/+83)	trxB/cwlO	thioredoxin‑disulfide reductase/peptidoglycan DL‑endopeptidase CwlO
Rejected: Frequency below/above cutoff threshold.

Only 100 of 677 total aligned reads displayed.

TTTTCTTCTGACACACTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTACAACGCCTTTAAATGCTTTTTTCCAG  >  NZ_CP034943/3376622‑3376899

ttttCTTCTGACACACTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCAt                                                                                                                                            >  1:5969403/1‑140 (MQ=255)

ttgtcttctGACACACTGTGCACTCCTTAGACCATCTATTCAAGTTTGGGCTCTTTCTTATATGATAAGAAGCCCCATCAAACGAATGCCTGACCCATATCCTATAAAATGTCATGGTGATAGGCTCTTGGTTTGCTCAt                                                                                                                                            >  1:5811829/4‑140 (MQ=255)

 tttCTTCTGACACACTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCAtt                                                                                                                                           >  1:7171159/1‑140 (MQ=255)

         gACACACTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATATCATGGTGATACGCTATTTTTTTGCTCATTTTTTtctc                                                                                                                                   >  2:3285579/1‑140 (MQ=255)

           cacacTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcat                                                                                                                                 <  1:101187/140‑1 (MQ=255)

           cacacTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcat                                                                                                                                 <  1:813667/140‑1 (MQ=255)

           cacacTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcat                                                                                                                                 <  1:612177/140‑1 (MQ=255)

           cacacTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAAAGTATTCCTTACCCATCTCCTATAAACTCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcat                                                                                                                                 <  1:2226612/140‑1 (MQ=255)

            acacTATTCACTCCTTCAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcatc                                                                                                                                <  2:1154039/140‑1 (MQ=255)

            acacTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcatc                                                                                                                                <  2:6063921/140‑1 (MQ=255)

             cacTATTCACTCCTTAAACCCTCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcatca                                                                                                                               <  2:7082894/140‑1 (MQ=255)

             aacTATTCACTCCTTAACACATCTTTTCAAGTTTTGGCTCTTTCTTATATGATAAGAATCACCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCtcatca                                                                                                                               <  2:4577419/139‑1 (MQ=255)

                gaTTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGa                                                                                                                            <  1:4368423/139‑1 (MQ=255)

                  ttCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGAtt                                                                                                                          >  1:3079225/1‑140 (MQ=255)

                  ttCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGAtt                                                                                                                          >  2:7756153/1‑140 (MQ=255)

                    cACTCCTTAAACCCTCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTGACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTaa                                                                                                                        <  2:5342220/140‑1 (MQ=255)

                       tCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATg                                                                                                                     <  2:3485766/140‑1 (MQ=255)

                       tCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATg                                                                                                                     <  2:2554400/140‑1 (MQ=255)

                       tCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATg                                                                                                                     <  2:2156996/140‑1 (MQ=255)

                        ccTTCAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGt                                                                                                                    >  1:3363845/1‑140 (MQ=255)

                        ccTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGt                                                                                                                    >  1:471104/1‑140 (MQ=255)

                        ccTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGt                                                                                                                    >  1:1537022/1‑140 (MQ=255)

                         cTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTCTAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTa                                                                                                                   <  1:1942167/140‑1 (MQ=255)

                          ttAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTAt                                                                                                                  >  1:32171/1‑140 (MQ=255)

                          ttAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTAt                                                                                                                  >  1:5890832/1‑140 (MQ=255)

                          ttAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTAt                                                                                                                  >  1:1646282/1‑140 (MQ=255)

                          ttAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCGATTTTTTTGATCATTTTTTTCTCATCACGATTAAATGTAt                                                                                                                  >  1:2788391/1‑140 (MQ=255)

                              aCCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTa                                                                                                              <  2:3369898/140‑1 (MQ=255)

                              aCCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTa                                                                                                              <  2:3879113/140‑1 (MQ=255)

                              aCCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTa                                                                                                              <  1:1729087/140‑1 (MQ=255)

                              aCCATCTTTTCAAGTTTGGGCTCTTTCGTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTCTAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTa                                                                                                              <  2:6226371/140‑1 (MQ=255)

                               ccATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTAGTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTaa                                                                                                             <  1:7746756/140‑1 (MQ=255)

                                 ctCTTTTCAAGTATGGGCTCTTTCCTATATGATAAGAATCCCCATCAAACGTATACCTTACCCAGATCCTATAACATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATGAAATGTATTGTaaaa                                                                                                           <  2:5479358/139‑1 (MQ=255)

                                 aTCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTaaaa                                                                                                           <  2:583155/140‑1 (MQ=255)

                                 aTCTTTTCAACTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTaaaa                                                                                                           <  2:6776411/140‑1 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         >  1:5589832/1‑140 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         >  2:5266431/1‑140 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         >  1:7327411/1‑140 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         >  2:1689216/1‑140 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         >  1:3270181/1‑140 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         <  2:276943/140‑1 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         <  2:7327411/140‑1 (MQ=255)

                                   cTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTGTTGCTCAATTTTTTCTCATCACGATTAAATGTATTGTAAAAgg                                                                                                         >  1:3689604/1‑140 (MQ=255)

                                      ttCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGta                                                                                                      <  1:2461857/140‑1 (MQ=255)

                                        cAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCACACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGtata                                                                                                    <  2:5677580/140‑1 (MQ=255)

                                        cAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGtata                                                                                                    <  2:5016595/140‑1 (MQ=255)

                                              tGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGtt                                                                                              >  1:6242713/1‑140 (MQ=255)

                                                  ctctTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTtaata                                                                                          <  1:653893/140‑1 (MQ=255)

                                                  ctctTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTtaata                                                                                          <  1:29525/140‑1 (MQ=255)

                                                         ttATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATaaagaaag                                                                                   <  1:5133496/140‑1 (MQ=255)

                                                            tatGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGc                                                                                <  2:4256794/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCACACGTATTCCTTACCCATATCCTATAAAATCTCCTGGTGATACGCTATTATTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  1:3873926/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGc                                                                                >  1:5426140/1‑137 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  1:7506849/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  2:5969403/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  2:5134002/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  1:4837834/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  2:7171159/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  2:664629/140‑1 (MQ=255)

                                                               gATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCAGGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  2:2369851/140‑1 (MQ=255)

                                                                 tAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCtt                                                                             <  2:2021307/138‑1 (MQ=255)

                                                                 tAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCt                                                                           <  2:1537022/140‑1 (MQ=255)

                                                                   aGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCtgt                                                                         <  2:2499991/140‑1 (MQ=255)

                                                                    gAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCtgtg                                                                        <  2:5890832/140‑1 (MQ=255)

                                                                    gAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCtgtg                                                                        <  2:3663252/140‑1 (MQ=255)

                                                                      aTCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGta                                                                      >  1:1060684/1‑140 (MQ=255)

                                                                          ccATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGa                                                                  <  2:322515/140‑1 (MQ=255)

                                                                          ccATCAAACGTATGCCTTACCCAGATCCTATAAACTCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGa                                                                  <  2:4659132/140‑1 (MQ=255)

                                                                           cATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATAAGCTATTTTTTTTCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGTGTATACATGTTAATAAAGAAAGAGCCTGCTGTGGATAGaa                                                                 >  1:6655422/1‑140 (MQ=255)

                                                                               aaaCGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGcc                                                             <  2:6434822/140‑1 (MQ=255)

                                                                                aaCGTATTCCTTCCCCATCTCCTATACAATCTCAGGGTGATACGCTATTTTGTTGCTCATTTATTTCTCATCACGCTTAAATGGATTGTAAAAGGGTATACATGTTAATACAGAAAGAGCCTTCTCTGTATAGAAGGccc                                                            <  2:1109788/140‑1 (MQ=255)

                                                                                     aTTCCTTACCCATATCCTATAAACTCTCAGGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTc                                                       <  1:4209761/140‑1 (MQ=255)

                                                                                     aTTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTc                                                       <  2:6586764/140‑1 (MQ=255)

                                                                                     aTTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTc                                                       <  1:6917518/140‑1 (MQ=255)

                                                                                     aTTCCTTACCCATATCCTAGAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTgac                                                       <  1:1831932/140‑3 (MQ=255)

                                                                                       tCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCtt                                                     <  2:450553/140‑1 (MQ=255)

                                                                                           tACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCGCTTGTCttattt                                                 >  2:232360/1‑140 (MQ=255)

                                                                                           tACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTATGTGTATAGAAGGCCCTTGGCttagtt                                                 >  1:6378608/1‑140 (MQ=255)

                                                                                            aCCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCttattta                                                >  1:2534777/1‑140 (MQ=255)

                                                                                                 tatCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTattatt                                           >  2:4354678/1‑140 (MQ=255)

                                                                                                  atCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTg                                          <  2:747094/140‑1 (MQ=255)

                                                                                                  atCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTg                                          <  2:698159/140‑1 (MQ=255)

                                                                                                   tCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGa                                         >  2:5532550/1‑140 (MQ=255)

                                                                                                       ataAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGaacaa                                     <  1:2731141/140‑1 (MQ=255)

                                                                                                        taAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATATAATGCCCTTGTCTTATTTATTATTGaacaac                                    >  1:5256480/1‑140 (MQ=255)

                                                                                                        taAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGaacaac                                    >  1:2317630/1‑140 (MQ=255)

                                                                                                        taAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGaacaac                                    <  1:70721/140‑1 (MQ=255)

                                                                                                        taAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGaacaac                                    >  1:5042856/1‑140 (MQ=255)

                                                                                                        taAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGGATACATGTTAATAAAGAAAGAGCCTACTGTGTATAGAATGCCCTTGTCTTATTTATTATTGaacaac                                    >  2:1389348/1‑140 (MQ=255)

                                                                                                        taAAATCTCATGGTGATACCCTATTTTTTTGCTCATTTTATTCTCATCACGATTAAATGTATTGTAAAAGGGAATACATGTTAATAAAGAAAGAGCCTTCTCTGTATAGAAGGCCCTTGTCTTATTTATTATTGaacaac                                    >  2:3030523/1‑140 (MQ=255)

                                                                                                         aaaaTCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAacaaca                                   <  1:1406387/140‑1 (MQ=255)

                                                                                                               tcATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCtt                             >  1:4053095/1‑140 (MQ=255)

                                                                                                                cATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATATAAGGCCCTTGGCTTATTTATTATTGAACAACACGTCTTa                            >  1:1293124/1‑140 (MQ=255)

                                                                                                                cATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTa                            >  1:3470913/1‑140 (MQ=255)

                                                                                                                cATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTa                            >  1:674732/1‑140 (MQ=255)

                                                                                                                             tATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGTCCCTTGTCTTATTTATTATTGAACAACACGTCTTACAACGCCTTTaaa               >  2:1870846/1‑140 (MQ=255)

                                                                                                                                    ttGCTCATTTTTTTCTCATCACGATTAAATTTATTTTAAAAGGGTATACATGTTAATAAATAAAGAGCCTTCTGTGTATATAAGGCCCTTGTCTTATTTATTATTTAACAAAAAGTCTTACAACGCCTTTAAATGCtttt        >  1:357743/1‑140 (MQ=255)

                                                                                                                                       cTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTACAACGCCTTTAAATGCTTTTTTc     >  2:2678362/1‑140 (MQ=255)

                                                                                                                                         cATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTACAACGCCTGTAAATGCTTTTTTCCa   >  1:4280908/1‑140 (MQ=255)

                                                                                                                                          aTTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTACAACGCCTTTAAATGCTTTTTTccct  <  1:2065371/140‑3 (MQ=255)

TTTTCTTCTGACACACTATTCACTCCTTAAACCATCTTTTCAAGTTTGGGCTCTTTCTTATATGATAAGAATCCCCATCAAACGTATTCCTTACCCATATCCTATAAAATCTCATGGTGATACGCTATTTTTTTGCTCATTTTTTTCTCATCACGATTAAATGTATTGTAAAAGGGTATACATGTTAATAAAGAAAGAGCCTTCTGTGTATAGAAGGCCCTTGTCTTATTTATTATTGAACAACACGTCTTACAACGCCTTTAAATGCTTTTTTCCAG  >  NZ_CP034943/3376622‑3376899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.