New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP034943 | 3592725 = | 240 (0.760) | 5 (0.020) | 3/232 | NT | 2.2% | coding (424/702 nt) | urtE | urea ABC transporter ATP‑binding subunit UrtE |
? | NZ_CP034943 | = 3592721 | 233 (0.810) | coding (428/702 nt) | urtE | urea ABC transporter ATP‑binding subunit UrtE | |||||
Rejected: Frequency below/above cutoff threshold. |
CGTTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/3592873‑3592725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagcTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCCGT < NZ_CP034943/3592721‑3592586 cggTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGACTGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC < 2:4070604/137‑1 CGTTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC < 2:4066766/140‑1 CGTTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC < 2:2793471/140‑1 CGTTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC < 2:356743/140‑1 CGTTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC < 2:3753941/140‑1 TTCGTGACAACCTGCTGCTTGGAGACGAGCCGCTTCCGAAGAAGGAGAGACGGGGGGAGGTCAAGGACGACATTGTTGAGTGGTTTCCTGCTTTCAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:3494984/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGACGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:4037600/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCcg > 2:5024684/1‑138 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 1:852039/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:4691121/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:4743126/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 1:3751752/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:1451242/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:4852097/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:2329394/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:907897/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:2795328/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:929886/1‑140 TTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATGTAAGCGGAGGCCAG > 2:3494883/1‑140 TCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGGAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGC > 2:12919/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGACGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 2:3029230/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 2:4115134/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 2:4183617/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 1:4884232/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 1:4261764/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 1:2623857/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 1:2236306/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 1:1538860/1‑140 CGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCA > 1:1538828/1‑140 ACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAG < 2:4874018/140‑1 ACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAAGGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAG < 1:1721153/140‑1 TGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCA > 1:838161/1‑94 TGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCA < 2:838161/94‑1 ACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC < 1:1313648/69‑1 ACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCC > 2:1313648/1‑69 TTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG > 2:1594224/1‑66 TTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAG < 1:1594224/66‑1 GATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTAT > 2:2574083/1‑129 GATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTAT > 2:5169021/1‑129 GATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTAT < 1:5169021/129‑1 GATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTAT < 1:2574083/129‑1 TTTAAGCGGAGGCCAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCA < 2:3116113/140‑1 CAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACAT < 2:852039/140‑1 CAGCAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACAT < 2:3751752/140‑1 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGACATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCACGTATCGAACTCATCAGACACGTTATCGTCGAAATTTCCCGAAAATGAGACATTTC > 1:1812884/1‑140 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTC > 2:4426688/1‑140 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTC > 1:1858658/1‑140 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTC > 1:3817842/1‑140 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTC > 1:3873970/1‑140 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTC > 1:707158/1‑140 CAGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATGTCCAGAAAAAGAGACATTTC > 2:1090092/1‑140 AGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCC < 2:1420066/140‑1 AGCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCC < 2:3011899/140‑1 GCAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCCG > 2:4641981/1‑140 CAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCCGT < 1:1649295/140‑1 CAGCTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCCGT < 1:1058445/140‑1 CGTTCGTGACAACCTGCTGCTTGGAGAAGAGCCGCTTCCGAAGAAGGAGAGAATGGGGGAGGTCAAGGAAGACATTTTTCAGTGGTTTCCTGCTTTAAAAGAGATGCTTGACCGCAAAGGCGGCGATTTAAGCGGAGGCCAGCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/3592873‑3592725 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcagcTAGCAATTGCCAGAGCGCTGATGGGAAATCCGAAAATTATTTTACTTGATGAACCAATGGAAGGAATTCAGCCGTCAATTATCGAACTAATCAGACAAGTTATCGTAGAAATTTCCAGAAAAAGAGACATTTCCGT < NZ_CP034943/3592721‑3592586 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |