BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	3592725 =	240 (0.760)	5 (0.020)	3/232	NT	2.2%	coding (424/702 nt)	urtE	urea ABC transporter ATP‑binding subunit UrtE
*	?	NZ_CP034943	= 3592721	233 (0.810)	5 (0.020)	3/232	NT	2.2%	coding (428/702 nt)	urtE	urea ABC transporter ATP‑binding subunit UrtE
Rejected: Frequency below/above cutoff threshold.

Only 100 of 259 total aligned reads displayed.

ACGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGC  >  NZ_CP034943/3592586‑3592858

acGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctg                                                                                                                                       <  1:1058445‑M2/140‑5 (MQ=255)

  ggAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgct                                                                                                                                     <  2:3011899‑M2/140‑7 (MQ=255)

   gAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctg                                                                                                                                    >  1:707158‑M2/1‑133 (MQ=255)

   gAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctg                                                                                                                                    >  2:4426688‑M2/1‑133 (MQ=255)

   gAAATGTCTCATTTTCGGGAAATTTCGACGATAACGTGTCTGATGAGTTCGATACGTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATGTCCCATCAGCGCTCTGGCAATTGCTAgctgctg                                                                                                                                    >  1:1812884‑M2/1‑133 (MQ=255)

           tctTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGc                                                                                                                            <  2:3330443/140‑1 (MQ=255)

            ctTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGcc                                                                                                                           <  1:1434086/140‑1 (MQ=255)

            ctTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCGAGCTGCTGCTGCTGGcc                                                                                                                           <  1:3847555/140‑1 (MQ=255)

            ctTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTGTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGcc                                                                                                                           <  1:3035162/140‑1 (MQ=255)

              ttttCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCACTTGCTAGCTGCTGCTGCTGGCCTc                                                                                                                         >  1:1478273/1‑140 (MQ=255)

                   tGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaa                                                                                                                    <  2:3116113‑M2/140‑24 (MQ=255)

                          ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAATATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                             <  1:601960/140‑1 (MQ=255)

                          ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                             <  1:1321387/140‑1 (MQ=255)

                          ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                             <  2:1499685/140‑1 (MQ=255)

                          ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                             <  2:2613331/140‑1 (MQ=255)

                          ttCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAAGTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                             <  2:2174254/140‑1 (MQ=255)

                                  tAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                     <  1:1444882/140‑1 (MQ=255)

                                         tCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCaa                                                                                              >  1:4969713/1‑140 (MQ=255)

                                             aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                          >  2:2236306/1‑140 (MQ=255)

                                              ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                         <  1:2461573/140‑1 (MQ=255)

                                              ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                         <  1:1545147/140‑1 (MQ=255)

                                              ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                         <  2:571703/140‑1 (MQ=255)

                                              ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCGAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                         <  1:1750816/140‑1 (MQ=255)

                                                aGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtctc                                                                                       >  1:5223582/1‑140 (MQ=255)

                                                aGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtctc                                                                                       >  1:4098536/1‑140 (MQ=255)

                                                  ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                     >  2:2842781/1‑140 (MQ=255)

                                                  ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                     >  2:4008537/1‑140 (MQ=255)

                                                  ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                     >  1:2913643/1‑140 (MQ=255)

                                                      aTAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatcgccgcctttgcggtcaagcatc                                                                                            <  1:5169021‑M2/129‑48 (MQ=255)

                                                      aTAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatcgccgcctttgcggtcaagcatc                                                                                            >  2:2574083‑M2/1‑82 (MQ=255)

                                                      aTAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatcgccgcctttgcggtcaagcatc                                                                                            >  2:5169021‑M2/1‑82 (MQ=255)

                                                      aTAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAgctgctgctggcctccgcttaaatcgccgcctttgcggtcaagcatc                                                                                            <  1:2574083‑M2/129‑48 (MQ=255)

                                                        aaTTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAg                                                                               <  1:917245/140‑1 (MQ=255)

                                                           tGACGGCTGAATGCCGTCCATGGGTTCATGAAGTAATATAATTTTCGGTTGTCCCATCATCGCTCTCGCAATTTCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAACGATCTCTTTTAAAGCat                                                                            <  2:1567717/140‑2 (MQ=255)

                                                                 cTGAATTCCTTCCAGTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAAcc                                                                      <  2:4243711/140‑1 (MQ=255)

                                                                  tGAATTCCTTCCATTGTTACATCAATTAAAATAATGTTCGGATTTCCCATCATCGCTCTGTCAATTGCTAGGTGCTTCTGCTTTCCTCCGCTTAAATCGCCGCCTTTGCTGTCAAGCAGCTCTTTTAAAGCAGGAAACCa                                                                     <  2:651374/140‑1 (MQ=255)

                                                                  tGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCa                                                                     <  1:1276467/140‑1 (MQ=255)

                                                                  tGAATTCCTTCCATTGGTTCATCAAGTAAAATAATGTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCa                                                                     <  2:4083540/140‑1 (MQ=255)

                                                                  tGAAGTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCa                                                                     <  1:2740683/140‑1 (MQ=255)

                                                                       tccttccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGaa                                                                <  1:4911948/140‑1 (MQ=255)

                                                                            ccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGATTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATg                                                           <  2:1091856/140‑1 (MQ=255)

                                                                             ctttGGTTAATAAATTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCGTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:1861228/138‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCTGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:3011118/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTACAGCAGGAAACCACTGAAAAATGt                                                          <  1:5135904/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:4517750/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:879477/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:827345/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:1007643/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  2:3161808/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:2682124/140‑1 (MQ=255)

                                                                             cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                          <  1:2430881/140‑1 (MQ=255)

                                                                              aTTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGACACCACTGAAAAATGTc                                                         >  2:174753/1‑140 (MQ=255)

                                                                                  gTTCATCATGTAAAATTATTTTCGTATTTCCGATCAGCGCTCTGGCAATTGCTAGCTGCTGCTTCTGGCCTCCGCTTACATCTCCGCCTTTTCTGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     <  2:3249417/140‑1 (MQ=255)

                                                                                  gTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     <  2:1833602/140‑1 (MQ=255)

                                                                                  gTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     <  1:4008616/140‑1 (MQ=255)

                                                                                  gTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     >  1:4183617/1‑140 (MQ=255)

                                                                                  gTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     <  1:3813217/140‑1 (MQ=255)

                                                                                  gTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCGAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     <  2:833645/140‑1 (MQ=255)

                                                                                  gTTCATCAAGTAAAATAATTTTCGGATTTCCCAGCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                     <  2:1166483/140‑1 (MQ=255)

                                                                                      atcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGa                                                 >  1:3193739/1‑140 (MQ=255)

                                                                                      atcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGa                                                 >  1:3244329/1‑140 (MQ=255)

                                                                                      atcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGa                                                 >  1:4462736/1‑140 (MQ=255)

                                                                                      atcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGAAGGAAACCACTGAAAAATGTCTTCCTTGa                                                 >  1:1691520/1‑140 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCCGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:3339911/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTTGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATGTCTTTTAATGCAGGAAACCACTGAAAATTGTCTTCCTTGAc                                                >  2:2828648/1‑140 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:2034952/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:3623573/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:3576294/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:3895324/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:4039481/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:3621898/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:1512234/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:2244304/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  2:1038589/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  2:2726566/140‑1 (MQ=255)

                                                                                       tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                <  1:5131561/140‑1 (MQ=255)

                                                                                         aaGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCt                                              <  2:4720562/140‑1 (MQ=255)

                                                                                          aGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTc                                             <  2:387167/140‑1 (MQ=255)

                                                                                            tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                         <  2:3972971/94‑1 (MQ=255)

                                                                                            tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGACACCACTGAAAAATGTCTTCCTTGACCTccc                                           >  1:4627515/1‑140 (MQ=255)

                                                                                            tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                           >  1:1666519/1‑140 (MQ=255)

                                                                                            tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                           <  1:4695956/140‑1 (MQ=255)

                                                                                            tAAAATAATTTTCGGATGTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                           <  2:4895934/140‑1 (MQ=255)

                                                                                                 tacttttCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCGGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCAtt                                      <  1:4789573/137‑1 (MQ=255)

                                                                                                 taatGTTCGGATTTCCCATCAGCGCTCGGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCAtt                                      <  1:4142872/140‑1 (MQ=255)

                                                                                                    ttttCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATtctc                                   >  2:3386378/1‑140 (MQ=255)

                                                                                                       tCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCCTTCTCTcc                                <  1:3527837/140‑1 (MQ=255)

                                                                                                                  aTCAGCGCTCTGTCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                     <  1:2529131/140‑1 (MQ=255)

                                                                                                                  aTCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                     <  2:2084910/140‑1 (MQ=255)

                                                                                                                     aGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCgg                  <  2:4804561/140‑1 (MQ=255)

                                                                                                                         ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAg                     >  2:3482140/1‑133 (MQ=255)

                                                                                                                          tctGGCAATTGCTAGCTGCTGCTGCTGTCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtctt             <  2:720348/140‑1 (MQ=255)

                                                                                                                          tctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtctt             <  2:2256524/140‑1 (MQ=255)

                                                                                                                          tctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtctt             <  2:639215/140‑1 (MQ=255)

                                                                                                                          tctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtctt             <  2:887013/140‑1 (MQ=255)

                                                                                                                            tGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtcttct           >  2:212360/1‑140 (MQ=255)

                                                                                                                                 aTTGCTAGCTGCTGCTGCTGGCCTCCGCTTAATTCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAag      <  2:362763/140‑1 (MQ=255)

                                                                                                                                 aTTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAag      <  2:2995523/140‑1 (MQ=255)

                                                                                                                                   tGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagca    <  1:212342/140‑1 (MQ=255)

                                                                                                                                     cTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagcagc  <  2:1447019/140‑1 (MQ=255)

ACGGAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGC  >  NZ_CP034943/3592586‑3592858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.