BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 1550631	265 (0.840)	6 (0.020) +CCGTCG	3/240	NT	2.3%	intergenic (+8/‑126)	pbpB/EO946_RS08110	penicillin‑binding protein 2B/stage V sporulation protein D
*	?	NZ_CP034943	1550655 =	261 (0.830)	6 (0.020) +CCGTCG	3/240	NT	2.3%	intergenic (+32/‑102)	pbpB/EO946_RS08110	penicillin‑binding protein 2B/stage V sporulation protein D
Rejected: Frequency below/above cutoff threshold.

Only 100 of 293 total aligned reads displayed.

CAGTACGGCGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCG  >  NZ_CP034943/1550492‑1550768

   tACGGCGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAATACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAaaagaaagaaa                                                                                                                                        >  1:3113182/1‑140 (MQ=255)

   tACGGCGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAaaagaaagaaa                                                                                                                                        >  1:4530142/1‑140 (MQ=255)

   tACGGCGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAaaagaaagaaa                                                                                                                                        >  1:2797438/1‑140 (MQ=255)

     cGGCGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAaaagaaagaaaga                                                                                                                                      >  1:4045871/1‑139 (MQ=255)

        cGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTg                                                                                                                                   >  1:1110213/1‑140 (MQ=255)

        cGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTg                                                                                                                                   >  2:4615142/1‑140 (MQ=255)

        cGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTg                                                                                                                                   >  2:1278047/1‑140 (MQ=255)

        cGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTg                                                                                                                                   >  1:986667/1‑140 (MQ=255)

           gCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAACACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCgg                                                                                                                                <  1:4279114/140‑1 (MQ=255)

           gCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCgg                                                                                                                                >  2:4924331/1‑140 (MQ=255)

             tGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCgggg                                                                                                                              >  2:964083/1‑140 (MQ=255)

                  ggAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGAtttt                                                                                                                         <  1:798021/140‑1 (MQ=255)

                     aTTCATATTGAAGTAAGCGTACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTccc                                                                                                                      <  2:2402254/140‑1 (MQ=255)

                     aTTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTccc                                                                                                                      >  2:5223655/1‑140 (MQ=255)

                       tCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCa                                                                                                                    <  2:3820382/140‑1 (MQ=255)

                       tCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCa                                                                                                                    <  2:3317699/140‑1 (MQ=255)

                       tCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCGTGCGGGGATTTTCCCCa                                                                                                                    <  2:220378/140‑1 (MQ=255)

                               aaGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAg                                                                                                            >  2:2133713/1‑140 (MQ=255)

                               aaGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAg                                                                                                            <  1:1278047/140‑1 (MQ=255)

                                    aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttt                                                                                                       >  2:1028569/1‑140 (MQ=255)

                                    aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttt                                                                                                       >  2:3190100/1‑140 (MQ=255)

                                    aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttg                                                                                                       >  2:2531737/1‑139 (MQ=255)

                                     gCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttc                                                                                                      <  2:4872983/140‑1 (MQ=255)

                                     gCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttc                                                                                                      <  1:357140/140‑1 (MQ=255)

                                      cGGACTAGGCTATGCTGTCAGCCAAAGAATCAAGAAGGACAAAGACATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCGTGATTAAAAAGAAAGCAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttct                                                                                                     <  2:4992857/140‑1 (MQ=255)

                                       ggACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttctt                                                                                                    <  2:408301/140‑1 (MQ=255)

                                       ggACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttctt                                                                                                    <  2:3468996/140‑1 (MQ=255)

                                         aCAAGGCTACGCTGTCAGCCAAAGTGTTAAGAAAGACAAAGAAATCAAAGACAAAACCGTAATCAAGGTTAAGTTTAAAAATCCTGATTAAAAAGAAAGccgtcgttatgcaggctttctttttttatgccttcagagga                                                                                                  >  1:4309296‑M1/1‑99 (MQ=255)

                                         aCAAGGCTACGCTGTCAGCCAAAGTGTTAAGAAAGACAAAGAAATCAAAGACAAAACCGTAATCAAGGTTAAGTTTAAAAATCCTGATTAAAAAGAAAGccgtcgttatgcaggctttctttttttatgccttcagagga                                                                                                  >  1:2553105‑M1/1‑99 (MQ=255)

                                            aGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAACACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCttttttt                                                                                               <  2:2578966/140‑1 (MQ=255)

                                            aGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCttttttt                                                                                               <  2:4648135/140‑1 (MQ=255)

                                              gcgaTGCTCTCAGCCAAAGCATCAACAAGTACAAAGAAAGAACAGTGACAAACGTTATCAAGGTTAAGTTTAAACACCCTTATTAAAAAGATAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                             <  2:2726102/137‑1 (MQ=255)

                                              gCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                             <  2:2243851/140‑1 (MQ=255)

                                              gCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                             <  1:1561951/140‑1 (MQ=255)

                                              gCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAACCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                             <  2:3405256/140‑1 (MQ=255)

                                              gCTATGCTGTAAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                             <  1:1725447/140‑1 (MQ=255)

                                                  tGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCt                                                                                         >  2:1144548/1‑140 (MQ=255)

                                                   gCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCtt                                                                                        <  2:1971240/140‑1 (MQ=255)

                                                   gCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAAGACAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAACAGAAAGACCGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCtt                                                                                        <  2:676529/140‑1 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:1225338/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:2677914/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  2:1702672/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  2:2069271/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:2394380/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:2149481/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:593056/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:1184164/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  1:3533555/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  2:64428/1‑140 (MQ=255)

                                                       tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGGTTAAAAACCCTGATTAAAAAGTAATAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                    >  2:2298539/1‑140 (MQ=255)

                                                        cAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCagag                                                                                   <  1:3358752/140‑1 (MQ=255)

                                                         aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAATAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgtgg                                                                                  >  2:4575278/1‑140 (MQ=255)

                                                         aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAATCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAtagg                                                                                  >  2:3064354/1‑140 (MQ=255)

                                                         aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATAGCTTCAgagg                                                                                  >  2:3177369/1‑140 (MQ=255)

                                                         aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgagg                                                                                  >  2:4375071/1‑140 (MQ=255)

                                                         aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgagg                                                                                  >  1:566251/1‑140 (MQ=255)

                                                         aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgagg                                                                                  >  2:4247852/1‑140 (MQ=255)

                                                           ccAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgaggag                                                                                <  2:3675449/140‑1 (MQ=255)

                                                           ccAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgaggag                                                                                <  2:3209275/140‑1 (MQ=255)

                                                           ccAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgaggag                                                                                <  2:3351363/140‑1 (MQ=255)

                                                           ccAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgaggag                                                                                <  2:120559/140‑1 (MQ=255)

                                                            cAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                               <  1:2432461/140‑1 (MQ=255)

                                                            cAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                               <  1:2080142/140‑1 (MQ=255)

                                                            cAAAGCATCAAGAACGACAAAGAAATAAAAGGGAAAAACGGTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                               <  1:3296245/140‑1 (MQ=255)

                                                              aaGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCACGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCAt                                                                             <  2:844502/140‑1 (MQ=255)

                                                               aGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATc                                                                            >  1:931405/1‑140 (MQ=255)

                                                                gCATCAAGAAGGACTAAGAAATACAACGGAACACCGTTATGAAGGGTAAGTATAAAAAGCCTGATTAAACAGAAAGAAAGCTTGCGGGGATTTTCCCCATGATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCg                                                                           <  2:3090426/140‑1 (MQ=255)

                                                                 cATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGt                                                                          >  1:5228331/1‑140 (MQ=255)

                                                                 cATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGt                                                                          >  1:1524361/1‑140 (MQ=255)

                                                                    cAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATGTTCCCCATTCTGCACGCTTTCTTTTATTATACCGTCAGTGGAGCATCGTTCt                                                                       >  2:4415830/1‑140 (MQ=255)

                                                                      agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                     <  2:1385785/140‑1 (MQ=255)

                                                                      agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                     <  2:3971938/140‑1 (MQ=255)

                                                                      agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                     <  1:1392067/140‑1 (MQ=255)

                                                                       gaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAcc                                                                    <  2:1524361/140‑1 (MQ=255)

                                                                          tgACAAAGAAATAAAAGGTAAAAAAGTTATCAAGGTTAAGTTTAAAAAAACTGATTAAAAAGAAAGACAGCTTGCGGGGATTTTACCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGt                                                                 <  2:324827/139‑1 (MQ=255)

                                                                             cAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCa                                                              >  2:1091965/1‑140 (MQ=255)

                                                                                 gAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTa                                                          <  2:1480297/140‑1 (MQ=255)

                                                                                     tAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAgg                                                      >  1:3443160/1‑140 (MQ=255)

                                                                                     tAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTAAGAGGAGCATCGTTCTACCTGTCCAATTACAgg                                                      >  1:2206792/1‑140 (MQ=255)

                                                                                      caaagacaaaaccgtaatcAAGGTTAAGTTTAAAAATCCTGATTAAAAAGAAAGccgtcgttatgcaggctttctttttttatgccttcagaggagcatcgttctacctgtccaaattcaggcataaaatgaaacaagcc                                                     <  2:4309296‑M1/133‑87 (MQ=255)

                                                                                       aaaGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCa                                                    <  1:4212052/140‑1 (MQ=255)

                                                                                       aaaGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCa                                                    <  2:1256214/140‑1 (MQ=255)

                                                                                            gAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                     >  1:2958807/1‑118 (MQ=255)

                                                                                                 aCGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGaaa                                          <  1:1011489/140‑1 (MQ=255)

                                                                                                  cGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAAc                                         <  1:676876/140‑1 (MQ=255)

                                                                                                     tATCAAGGATAAGTTTATAAACACTGATTAAAAATAAAGAAAGCTTGAGGTGATTTTCCACATTATGCAGGCTTTCTTTTATTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAg                                      <  2:2868120/140‑1 (MQ=255)

                                                                                                       tCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGcc                                    <  1:4992715/140‑1 (MQ=255)

                                                                                                            gTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAAt                               <  2:1888017/140‑1 (MQ=255)

                                                                                                              tAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATaa                             <  2:3542616/140‑1 (MQ=255)

                                                                                                              tAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATaa                             <  2:1669059/140‑1 (MQ=255)

                                                                                                                     aaaaaCCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGa                      >  1:3853004/1‑140 (MQ=255)

                                                                                                                        aaCCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCAGAAAATGAAACAAGCCTAAATAAGGAGTGAACg                   <  1:2881306/140‑1 (MQ=255)

                                                                                                                               aaaaaaaaGAAATAAATCTTGCGCGGAATTTCCCCATTATACACGCTTTATTTTTTTATAACTTCAGATGAGCAACTTTCTACCTGTCCAATTACATGCATAAAATGAAACAAGCATAAATAAGGAGTGAACGGTCTCtt            >  1:3726189/4‑140 (MQ=255)

                                                                                                                                 tAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATGATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTgc          <  2:5151703/140‑1 (MQ=255)

                                                                                                                                  aaaaaGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTgcg         <  2:2881384/140‑1 (MQ=255)

                                                                                                                                        aaagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGtctc   <  2:1184164/140‑1 (MQ=255)

                                                                                                                                        aaagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGtctc   <  1:4810518/140‑1 (MQ=255)

                                                                                                                                        aaagaaagCGTGCGGGGATTTTCCCCTTTCTGCAGGCTTTCTTTTTTTATACCTTCAGATGAGCATCGTTCTACCTGTCCAATTACTGGCATAAAATGAAACAAGCCGAAATAATGAGTGAACGGTCTCTTGCGCGtgtc   <  1:1843317/140‑1 (MQ=255)

                                                                                                                                         aagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGAGTCTCg  >  2:4045478/1‑140 (MQ=255)

                                                                                                                                          agaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                               <  1:3906932/62‑1 (MQ=255)

CAGTACGGCGAGCTGGCGGGAATTCATATTGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCG  >  NZ_CP034943/1550492‑1550768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.