New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 1550631265 (0.840)6 (0.020)
+CCGTCG		 3/240 NT 2.3% intergenic (+8/‑126) pbpB/EO946_RS08110 penicillin‑binding protein 2B/stage V sporulation protein D
?NZ_CP034943 1550655 = 261 (0.830)intergenic (+32/‑102) pbpB/EO946_RS08110 penicillin‑binding protein 2B/stage V sporulation protein D
Rejected: Frequency below/above cutoff threshold.

Only 100 of 277 total aligned reads displayed.

TGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGAAAACGTTTATT  >  NZ_CP034943/1550521‑1550794
                                                                                                                                      |                                                                                                                                           
tGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGc                                                                                                                                        >  1:3542616/1‑140 (MQ=255)
tGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGc                                                                                                                                        >  1:1669059/1‑140 (MQ=255)
  aaGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAg                                                                                                                                      <  1:1278047/140‑1 (MQ=255)
       aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttt                                                                                                                                 >  2:3739596/1‑140 (MQ=255)
       aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttt                                                                                                                                 >  2:3163023/1‑140 (MQ=255)
       aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttt                                                                                                                                 >  1:586499/1‑140 (MQ=255)
       aGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGcttt                                                                                                                                 >  1:1888017/1‑140 (MQ=255)
        gCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttc                                                                                                                                <  2:4872983/140‑1 (MQ=255)
        gCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTGAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttc                                                                                                                                <  2:4922284/140‑1 (MQ=255)
         cGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttct                                                                                                                               >  2:1183353/1‑140 (MQ=255)
          ggACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGctttctt                                                                                                                              <  2:408301/140‑1 (MQ=255)
            aCAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGGTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCtttt                                                                                                                            >  1:4156185/1‑140 (MQ=255)
               aGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAACACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCttttttt                                                                                                                         <  2:2578966/140‑1 (MQ=255)
               aGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCtttgttt                                                                                                                         >  2:4637422/1‑140 (MQ=255)
                 gcgaTGCTCTCAGCCAAAGCATCAACAAGTACAAAGAAAGAACAGTGACAAACGTTATCAAGGTTAAGTTTAAACACCCTTATTAAAAAGATAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                                                       <  2:2726102/137‑1 (MQ=255)
                 gCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                                                       <  2:5216207/140‑1 (MQ=255)
                 gCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                                                       <  1:2655643/140‑1 (MQ=255)
                 gCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAACCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                                                       <  2:3405256/140‑1 (MQ=255)
                 gCTATGCTGTCAGCCAAAGCATAAAGAAGGACAAAGAAATAAAAGTGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                                                       <  2:4713466/140‑1 (MQ=255)
                     tGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCt                                                                                                                   >  2:1011489/1‑140 (MQ=255)
                     tGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCt                                                                                                                   >  2:2434915/1‑140 (MQ=255)
                     tGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCt                                                                                                                   >  2:2260102/1‑140 (MQ=255)
                     tGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCt                                                                                                                   >  2:2162010/1‑140 (MQ=255)
                     tGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCt                                                                                                                   >  2:2080142/1‑140 (MQ=255)
                      gCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCtt                                                                                                                  <  2:1971240/140‑1 (MQ=255)
                      gCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTGTTTTTATACCtg                                                                                                                  >  2:3501700/1‑139 (MQ=255)
                      gCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAAGACAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAACAGAAAGACCGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCtt                                                                                                                  <  2:676529/140‑1 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATg                                                                                                                                         <  2:3185027/113‑1 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  1:1480297/1‑140 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  1:2149481/1‑140 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  1:1184164/1‑140 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  2:1276712/1‑140 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  2:1702672/1‑140 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  1:1225338/1‑140 (MQ=255)
                          tCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCaga                                                                                                              >  2:64428/1‑140 (MQ=255)
                            aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAATAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgtgg                                                                                                            >  2:4575278/1‑140 (MQ=255)
                            aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGTATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCagagt                                                                                                            >  1:2286166/1‑139 (MQ=255)
                            aGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgagg                                                                                                            >  1:240270/1‑140 (MQ=255)
                             acaaggctacgctgtcagccaaagtgttaagaaagacaaagaaatcaaagacaaaaccgtaatcaaggttaagtttaaaaatcctgattaaaaagaaagccgtcgTTATGCAGGCTTTCTTTTTTTATGCCTTCAgagga                                                                                                           >  1:4309296‑M2/106‑140 (MQ=255)
                              ccAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAgaggag                                                                                                          <  1:389622/140‑1 (MQ=255)
                               cAAAGCATCCACAAGGACAAAGAAATACACGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  1:2737409/140‑1 (MQ=255)
                               cAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAATGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  2:2535058/140‑1 (MQ=255)
                               cAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  1:3845141/140‑1 (MQ=255)
                               cAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  2:4992066/140‑1 (MQ=255)
                               cAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  2:4382150/140‑1 (MQ=255)
                               cAAAGCATCAAGAACGACAAAGAAATAAAAGGGAAAAACGGTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  1:3296245/140‑1 (MQ=255)
                                aaaGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCa                                                                                                        <  2:3244722/140‑1 (MQ=255)
                                  aGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATc                                                                                                      >  1:931405/1‑140 (MQ=255)
                                        aagaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGGTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTtat                                                                                                                       >  1:1344319/1‑117 (MQ=255)
                                         agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                                               <  2:3208098/140‑1 (MQ=255)
                                         agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                                               <  1:3685955/140‑1 (MQ=255)
                                         agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                                               <  1:4427579/140‑1 (MQ=255)
                                         agaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAc                                                                                               <  2:3971938/140‑1 (MQ=255)
                                          gaagGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTAcc                                                                                              <  2:1524361/140‑1 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGc                                                                                                         <  2:3315095/125‑1 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTc                                                                                          >  1:212785/1‑140 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTc                                                                                          >  2:3368265/1‑140 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTc                                                                                          >  2:4212052/1‑140 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTc                                                                                          >  1:3320373/1‑140 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTAAGAGGAGCATCGTTCTACCTGTc                                                                                          >  1:52843/1‑140 (MQ=255)
                                              gACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCATGATTAAAAAGAAAGAAAGATTGCGGGGATATTCCCAATTATGCAGGCTTTCTTTTTTTATAACTTCAGAGGAGCATCGTTCTAACTGTc                                                                                          >  1:807004/1‑140 (MQ=255)
                                                    gAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTa                                                                                    <  1:2998980/140‑1 (MQ=255)
                                                    gAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTa                                                                                    <  2:1480297/140‑1 (MQ=255)
                                                    gAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTa                                                                                    <  2:1225338/140‑1 (MQ=255)
                                                        tAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAgg                                                                                >  1:2881384/1‑140 (MQ=255)
                                                        tAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTAAGAGGAGCATCGTTCTACCTGTCCAATTACAgg                                                                                >  1:2206792/1‑140 (MQ=255)
                                                               gAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATaaaa                                                                         >  2:1120574/1‑140 (MQ=255)
                                                                aaaaaCGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAAt                                                                        <  2:1196643/140‑1 (MQ=255)
                                                                    aCGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGaaa                                                                    <  1:1011489/140‑1 (MQ=255)
                                                                    aCGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGaaa                                                                    <  1:2434915/140‑1 (MQ=255)
                                                                     cGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAAc                                                                   <  1:676876/140‑1 (MQ=255)
                                                                        tATCAAGGATAAGTTTATAAACACTGATTAAAAATAAAGAAAGCTTGAGGTGATTTTCCACATTATGCAGGCTTTCTTTTATTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAg                                                                <  2:2868120/140‑1 (MQ=255)
                                                                         aTCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGc                                                               >  1:155378/1‑140 (MQ=255)
                                                                          tCAAGGTTAAGTTTAAAACCCCTGATTAAAAAGAAAGACAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGcc                                                              <  2:4530142/140‑1 (MQ=255)
                                                                          tCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGcc                                                              <  1:4992715/140‑1 (MQ=255)
                                                                          caaagacaaaaccgtaatcaaggttaagtttaaaaatcctgattaaaaagaaagccgtcgTTATGCAGGCTTTCTTTTTTTATGCCTTCAGAGGAGCATCGTTCTACCTGTCCAAATTCAGGCATAAAATGAAACAAGcc                                                              <  2:4309296‑M2/80‑1 (MQ=255)
                                                                               gTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAAt                                                         >  1:1811452/1‑140 (MQ=255)
                                                                               gTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAAt                                                         <  2:1888017/140‑1 (MQ=255)
                                                                                 tAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATaa                                                       <  2:1669059/140‑1 (MQ=255)
                                                                                         aaataccTTATTAAACAGAACGAAAGCTTGCGGGGATTTTGCCCAGTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGaa                                               <  2:3071603/135‑1 (MQ=255)
                                                                                          aaaCCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAAc                                              <  1:5144464/140‑1 (MQ=255)
                                                                                           aaCCCTGATTAAACAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACg                                             <  2:1350785/140‑1 (MQ=255)
                                                                                           aaCCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACg                                             <  2:1090965/140‑1 (MQ=255)
                                                                                                     aaaaaGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTgcg                                   <  2:2881384/140‑1 (MQ=255)
                                                                                                           aaagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGtctc                             <  1:4810518/140‑1 (MQ=255)
                                                                                                           aaagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGtctc                             <  1:4247852/140‑1 (MQ=255)
                                                                                                            aagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGAGTCTCg                            >  2:4045478/1‑140 (MQ=255)
                                                                                                            aagaaagCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATGACAGGCATAAAATGAAACAAGCGTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCg                            >  1:350876/1‑140 (MQ=255)
                                                                                                                 agCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGt                       <  2:834063/140‑1 (MQ=255)
                                                                                                                 agCTAGCGGGGATGGTCCCCATTATGCAGGCGTTCTTTATTTAGACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGACACAAGCCTAAATAAGGCGTGAACGGTCTCTTGCGCGTCTCGAATGt                       <  2:858080/140‑1 (MQ=255)
                                                                                                                     tGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACg                   >  2:2240682/1‑140 (MQ=255)
                                                                                                                            agtggccccATTTTGCAGGCCTACATTTTTTATCCCTTCAGAGGAGCATCCTTCTACCTGTCCAAGTCCAGGCATAACATGAAACAAGCCTACATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGaa            <  2:2966165/135‑1 (MQ=255)
                                                                                                                            aTTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGaa            <  1:64428/140‑1 (MQ=255)
                                                                                                                            aTTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGaa            <  1:1053927/140‑1 (MQ=255)
                                                                                                                             ttttCCCCATTATGCAGTCTTTCTTTTTTGATACCTTCAGAGGAGCATCGTTCTACCTGTCAAATTACAGGCATACAATGAAACAAGCCTACATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGaaa           <  2:3803809/140‑1 (MQ=255)
                                                                                                                                tCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGAAAACg        <  2:3547657/140‑1 (MQ=255)
                                                                                                                                 ccccATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGAAAACGt       <  2:593056/140‑1 (MQ=255)
                                                                                                                                      ttATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGACAACGTttatt  >  2:3350040/1‑140 (MQ=255)
                                                                                                                                      ttATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGAAAACGTttatt  >  2:5082331/1‑140 (MQ=255)
                                                                                                                                      ttATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGAAAACGTttatt  <  2:2143287/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                           
TGAAGTAAGCGGACAAGGCTATGCTGTCAGCCAAAGCATCAAGAAGGACAAAGAAATAAAAGGGAAAAACGTTATCAAGGTTAAGTTTAAAAACCCTGATTAAAAAGAAAGAAAGCTTGCGGGGATTTTCCCCATTATGCAGGCTTTCTTTTTTTATACCTTCAGAGGAGCATCGTTCTACCTGTCCAATTACAGGCATAAAATGAAACAAGCCTAAATAAGGAGTGAACGGTCTCTTGCGCGTCTCGAATGTAACGGTTAGAAAACGTTTATT  >  NZ_CP034943/1550521‑1550794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.