BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 2653801	463 (1.320)	3 (0.010)	3/246	NT	0.67%	coding (466/1161 nt)	safA	spore coat assembly protein SafA
*	?	NZ_CP034943	2653808 =	440 (1.290)	3 (0.010)	3/246	NT	0.67%	coding (459/1161 nt)	safA	spore coat assembly protein SafA
Rejected: Frequency below/above cutoff threshold.

Only 100 of 489 total aligned reads displayed.

GAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGATACA  >  NZ_CP034943/2653663‑2653938

 aaCAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGAt                                                                                                                                         >  1:4644255/1‑140 (MQ=255)

 aaCAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGAt                                                                                                                                         >  1:762394/1‑140 (MQ=255)

 aaCAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGAt                                                                                                                                         >  2:4444305/1‑140 (MQ=255)

   cAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCt                                                                                                                                       <  1:618489/140‑1 (MQ=255)

   cAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCt                                                                                                                                       <  1:2717458/140‑1 (MQ=255)

   cAGCCCGCATATTCGGAACTGTCTGATGTAAGTTTTGTTCTTCCATACCGCCTACCTCTTGCGACTATGGCTTATTAGTCATATTCGTATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTTATCt                                                                                                                                       <  2:5557734/140‑1 (MQ=255)

      ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTggg                                                                                                                                    >  2:114495/1‑140 (MQ=255)

      ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTgg                                                                                                                                    >  2:5299056/1‑140 (MQ=255)

      ccGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTAATCATAGCCTCCTGTTGTGGAAATTTATCTTgt                                                                                                                                    >  2:3871074/1‑139 (MQ=255)

        ggCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTTGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTc                                                                                                                                  <  2:2170559/140‑1 (MQ=255)

             atTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCa                                                                                                                             <  2:2527289/140‑1 (MQ=255)

             atTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCa                                                                                                                             <  2:1819853/140‑1 (MQ=255)

              ttCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                            <  1:1880038/140‑1 (MQ=255)

              ttCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                            <  2:4390072/140‑1 (MQ=255)

              ttCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                            <  2:154152/140‑1 (MQ=255)

               gcGGAACTGTGTGATGAACGATTTCTTCGTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAtg                                                                                                                           <  1:3382860/139‑1 (MQ=255)

                 ggAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAtgtg                                                                                                                         <  2:534295/140‑1 (MQ=255)

                  gAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                        <  2:2975963/140‑1 (MQ=255)

                  gAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                        <  1:1045845/140‑1 (MQ=255)

                  gAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                        <  1:3041672/140‑1 (MQ=255)

                  gAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                        <  1:2541213/140‑1 (MQ=255)

                   aaCTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTCGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGAt                                                                                                                       <  1:3756871/140‑1 (MQ=255)

                      tgtgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACa                                                                                                                    >  1:940057/1‑140 (MQ=255)

                       gtgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACat                                                                                                                   <  2:3621471/140‑1 (MQ=255)

                        tgtgATGAAGGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                            <  2:2848576/130‑1 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGACATTGATCTTGGTCTTGCATGTGATACatc                                                                                                                  >  1:416008/1‑139 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGACATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  2:1438605/1‑140 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGc                                                                                                                              <  2:2412116/128‑1 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCAt                                                                                                                            <  2:1490550/130‑1 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGa                                                                                                                        <  1:5262793/134‑1 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  1:1103703/1‑140 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  1:824093/1‑140 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  2:4620218/1‑140 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  1:5759801/1‑140 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  1:5730812/1‑140 (MQ=255)

                        tgtgATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACata                                                                                                                  >  1:3674972/1‑140 (MQ=255)

                          tgatgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATg                                                                                                                >  2:70366/1‑140 (MQ=255)

                            atgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGAt                                                                                                              <  1:2416183/140‑1 (MQ=255)

                            atgaACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGAt                                                                                                              <  1:4087663/140‑1 (MQ=255)

                                            tcCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCatg                                                                                              >  1:4018762/1‑140 (MQ=255)

                                             ccATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCatga                                                                                             >  2:3695160/1‑140 (MQ=255)

                                                    gCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGttttt                                                                                      >  1:5451285/1‑140 (MQ=255)

                                                     ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATCTTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                     >  2:794370/1‑140 (MQ=255)

                                                     ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                     >  1:5549469/1‑140 (MQ=255)

                                                     ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGtttttt                                                                                     >  1:4715139/1‑140 (MQ=255)

                                                     ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCAATATTTCCGTCATGATGtttttt                                                                                     >  2:5737536/1‑140 (MQ=255)

                                                     ccTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGAGATACATATGATCCATATTTCCGTCATGATCtttttt                                                                                     >  1:4874879/1‑140 (MQ=255)

                                                        aCCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCgg                                                                                  >  2:4543603/1‑140 (MQ=255)

                                                        aCCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCgg                                                                                  <  2:4684319/140‑1 (MQ=255)

                                                        aCCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCgg                                                                                  >  2:2225817/1‑140 (MQ=255)

                                                         ccTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGc                                                                                 <  2:5498068/140‑1 (MQ=255)

                                                          ctctGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTTCATTTTCCATCTTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATACATATTTCCGTCATGATGTTTTTTAggat                                                                                >  1:3210220/1‑138 (MQ=255)

                                                          ctctGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGAATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGct                                                                                >  2:3771978/1‑140 (MQ=255)

                                                             tGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGctcct                                                                             >  1:3892923/1‑140 (MQ=255)

                                                             tGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGctcct                                                                             <  1:1220983/140‑1 (MQ=255)

                                                               gcgcCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCtcctcc                                                                           >  1:1392504/1‑140 (MQ=255)

                                                               gcgcCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCtcctcc                                                                           >  1:2990416/1‑140 (MQ=255)

                                                                         cATATTAGGCATATTCGGATAATTTGCATTTTACATATTACTCATAGCCTAATGTTGTGGAAATTGATCTTGTTCTTGAATGTGATACATATGATCCATATTTCAGTCATGATGTTTTTTCGGCTCCTCCGGTTTAgggg                                                                 <  1:3452030/140‑1 (MQ=255)

                                                                         cATATGAGGCATATTCGGATAATTTGCAGTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAgggg                                                                 <  1:4223758/140‑1 (MQ=255)

                                                                          atatTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCATCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAggggg                                                                <  2:5796375/140‑1 (MQ=255)

                                                                             ttAGGGATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTATTTTCGGCTCCTCCGGTTTAGGGGGCGa                                                             <  1:3627474/140‑1 (MQ=255)

                                                                              tAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATCGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGAc                                                            <  2:2708336/140‑1 (MQ=255)

                                                                               aGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGAcc                                                           <  1:1997887/140‑1 (MQ=255)

                                                                               aGGCATATTCGGATAATTTGCATTTTCCATAGTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGAcc                                                           <  1:2622778/140‑1 (MQ=255)

                                                                                ggCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCa                                                          >  2:3426985/1‑140 (MQ=255)

                                                                                  cATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAg                                                        <  1:715285/140‑1 (MQ=255)

                                                                                     atTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCt                                                     >  2:5584282/1‑140 (MQ=255)

                                                                                     atTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCt                                                     >  2:2007143/1‑140 (MQ=255)

                                                                                     atTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTGGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCt                                                     >  2:2346855/1‑140 (MQ=255)

                                                                                      ttCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGTCTg                                                    >  2:3099935/1‑140 (MQ=255)

                                                                                                 tGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGATGtt                                         <  1:2258948/140‑1 (MQ=255)

                                                                                                    aTTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtca                                      <  2:1392504/140‑1 (MQ=255)

                                                                                                     ttttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcat                                     <  2:119426/140‑1 (MQ=255)

                                                                                                     ttttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcat                                     <  1:3522323/140‑1 (MQ=255)

                                                                                                       ttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                   <  1:1676386/140‑1 (MQ=255)

                                                                                                       ttCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                   <  1:5137125/140‑1 (MQ=255)

                                                                                                       ttCCATATTACTCATAGCCGCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                   <  1:2128560/140‑1 (MQ=255)

                                                                                                       ttCCATAGTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTtcatat                                   <  1:2862497/140‑1 (MQ=255)

                                                                                                               tACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATGTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCAtaataa                           <  2:891122/140‑1 (MQ=255)

                                                                                                                  tCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCg                        >  2:4491662/1‑140 (MQ=255)

                                                                                                                    aTAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCAGATTTCCGTCCTGAGGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGCCTGGAAAAGATGTTTCATATCATACTACTCgag                      >  2:3255424/1‑138 (MQ=255)

                                                                                                                    aTAGCCTCCTGTGCTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATCTTTCCGTCATGATGTTGTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGtt                      <  1:3134676/140‑1 (MQ=255)

                                                                                                                        cctcctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTcaca                  >  1:4401770/1‑140 (MQ=255)

                                                                                                                         ctcctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACAt                 <  2:4935273/140‑1 (MQ=255)

                                                                                                                           cctGTTGTGGAAATTGATCTTTGTCTTGCATGTGATAAATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCa               >  2:478283/1‑140 (MQ=255)

                                                                                                                            ctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCTGTTTAGGTGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAg              >  2:3992521/1‑140 (MQ=255)

                                                                                                                            ctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAg              >  2:5144970/1‑140 (MQ=255)

                                                                                                                            ctGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATAAg              >  2:2295653/1‑140 (MQ=255)

                                                                                                                               ttgtGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCtt           <  1:4510759/140‑1 (MQ=255)

                                                                                                                               ttgtGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCtt           <  2:3492755/140‑1 (MQ=255)

                                                                                                                               ttgtGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCtt           <  1:2356965/140‑1 (MQ=255)

                                                                                                                                 gtgGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCa         <  1:4540492/140‑1 (MQ=255)

                                                                                                                                 gtgGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCa         <  2:1061457/140‑1 (MQ=255)

                                                                                                                                  tgGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAg        >  2:1289648/1‑140 (MQ=255)

                                                                                                                                  tgGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTAGGATCCTCCGGTTTATGGGGCGACCAATGCTGGAAAAGCTGTTTCATATCATAATAAACCTTCACATCAGCTTCAg        >  2:4166339/1‑140 (MQ=255)

                                                                                                                                    gAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTc          >  2:50249/1‑136 (MQ=255)

                                                                                                                                    gAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTc          <  1:50249/136‑1 (MQ=255)

                                                                                                                                    gAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGa      >  1:1523079/1‑140 (MQ=255)

                                                                                                                                    gAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGa      >  1:385613/1‑140 (MQ=255)

                                                                                                                                    gAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGa      >  1:2068921/1‑140 (MQ=255)

GAACAGCCGGCATATTCGGAACTGTGTGATGAACGTTTTCTTCTTCCATACCGCCTACCTCTGGCGCCTTTGGCATATTAGGCATATTCGGATAATTTGCATTTTCCATATTACTCATAGCCTCCTGTTGTGGAAATTGATCTTGGTCTTGCATGTGATACATATGATCCATATTTCCGTCATGATGTTTTTTCGGCTCCTCCGGTTTAGGGGGCGACCAAGGCTGGAAAAGCTGTTTCATATCATAATAATCGTTCACATCAGCTTCAGGATACA  >  NZ_CP034943/2653663‑2653938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.