BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 829222	356 (1.020)	3 (0.010)	3/244	NT	0.88%	coding (664/1689 nt)	treC	alpha,alpha‑phosphotrehalase
*	?	NZ_CP034943	829226 =	333 (0.980)	3 (0.010)	3/244	NT	0.88%	coding (668/1689 nt)	treC	alpha,alpha‑phosphotrehalase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 368 total aligned reads displayed.

AAATGAAGAGGTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACTGTAGATCATTGCATTCGATATACAAAT  >  NZ_CP034943/829089‑829365

aaaTGCAGAGGTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTGGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGcc                                                                                                                                           <  2:5732918/140‑1 (MQ=255)

  aTGAAGAGGTCAGACAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGTATGTGGAAGACGGCGATGATGGCCGt                                                                                                                                         <  2:1011968/140‑1 (MQ=255)

  aTGAAGAGGTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGt                                                                                                                                         <  2:1695990/140‑1 (MQ=255)

  aTGAAGAGGTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGt                                                                                                                                         <  1:1497894/140‑1 (MQ=255)

  aTGAAGAGGTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGt                                                                                                                                         >  1:320968/1‑140 (MQ=255)

  aTGAAGAGGTCAGAAAGCATGTCTATGAGATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAACGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGt                                                                                                                                         <  1:2621455/140‑1 (MQ=255)

  aTGAAGAGGTCAGAAAGCATGTATATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGt                                                                                                                                         <  2:4011525/140‑1 (MQ=255)

          gTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTa                                                                                                                                 >  1:2873780/1‑140 (MQ=255)

            cAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTaca                                                                                                                               <  1:5769841/140‑1 (MQ=255)

               aaaGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTg                                                                                                                            >  1:5224495/1‑140 (MQ=255)

                    aTGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACggg                                                                                                                       >  2:4733568/1‑140 (MQ=255)

                    aTGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACggg                                                                                                                       >  2:4885712/1‑140 (MQ=255)

                    aTGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACggg                                                                                                                       >  1:825091/1‑140 (MQ=255)

                    aTGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACggg                                                                                                                       >  2:5532745/1‑140 (MQ=255)

                    aTGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTCATTTCTAAAGAGCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCTTAGCTTTTACACTGACggg                                                                                                                       >  2:420819/1‑140 (MQ=255)

                     tGTCTTTGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGc                                                                                                                      >  1:3124089/1‑140 (MQ=255)

                     tGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGc                                                                                                                      >  2:3862029/1‑140 (MQ=255)

                             atatgatGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCGTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTCGCTTTTACACTGACGGGCCGCGGGTg                                                                                                              >  1:4594745/1‑140 (MQ=255)

                             atatcatGCAATTATGCTTTGAAAAGGGAATATACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCAGAATGTGGAAGACGGCGATGATGGACGTAGCTTTTACACTGACGTCCCGCGGGTg                                                                                                              >  2:5418612/1‑140 (MQ=255)

                               atgatgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCa                                                                                                            >  2:5623970/1‑140 (MQ=255)

                               atgatgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTATTACACTGACGGGCCGCGGGTGCa                                                                                                            >  2:514272/1‑140 (MQ=255)

                                 gatgCATTTTTGGTTTGAAAAGGGAATATACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGAGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGAAGGGCCGCGGGTGCATg                                                                                                          >  2:1387536/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTGGCTTTTACACTGACGGGCCGCGGGTGCATGaa                                                                                                        >  2:3083900/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGaa                                                                                                        >  2:4449851/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGaa                                                                                                        >  1:2917207/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGaa                                                                                                        >  1:1715113/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGaa                                                                                                        >  2:2847024/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGaa                                                                                                        >  1:1463317/1‑140 (MQ=255)

                                   tgCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGACGTAGATTTTACACTGACGGGCCGCGGGtgaatgaa                                                                                                        >  2:4355760/1‑140 (MQ=255)

                                     cATTTATGGATTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGCTTTCTAAAGATCAGCGCTTTCCGCATGTGGAACACGCCGATGATGGCCGTAGCTATAACACTCCCGGGCCGCGGGTGCATGAAtt                                                                                                      >  2:3254942/1‑140 (MQ=255)

                                      tgcatttttggtttgaaaagggaatagacggctttaggcttgatgtcatcaacctgatttctaaagatcagcgctttccgaatgcggaggaaggcgacgGCCGCTCTTTTTACACTGCCGGGCCGCGGGTGCACGAAttt                                                                                                     >  1:2753314‑M2/100‑140 (MQ=255)

                                        ttttGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTAAACTGACGGGCCGCGGGTGCATGAATTTCt                                                                                                   >  2:3593561/1‑140 (MQ=255)

                                                  aaaaGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCatgaaatg                                                                                         >  1:4756330/1‑140 (MQ=255)

                                                   aaaGGGAAGAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCatgaaatga                                                                                        <  2:1051505/140‑1 (MQ=255)

                                                                 gCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGaa                                                                                   >  1:3733018/1‑131 (MQ=255)

                                                                 gCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGttt                                                                          >  2:1642833/1‑140 (MQ=255)

                                                                 gCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGttt                                                                          >  2:1825049/1‑140 (MQ=255)

                                                                 gCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGttt                                                                          >  2:3695821/1‑140 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAACGGTGtttt                                                                         <  2:879798/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         >  1:1021973/1‑140 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:2503110/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:265446/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:2983145/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:3353061/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  2:270595/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         >  1:1353816/1‑140 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  2:23332/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:1053804/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         >  1:3923256/1‑140 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  2:1487933/140‑1 (MQ=255)

                                                                  cTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:5466806/140‑1 (MQ=255)

                                                                  cTTCAGGCTGGATGTCATTAACCTGATTTCTAAAGATCAGCGCTGTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  2:4556024/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGACAAGGTGTTTTca                                                                       <  1:5149479/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  2:4582465/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  1:1231801/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  2:3962857/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  2:1952077/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  1:2155128/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  1:1549134/140‑1 (MQ=255)

                                                                    tCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTca                                                                       <  1:4528176/140‑1 (MQ=255)

                                                                      aGGTTTGTTGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTcaca                                                                     <  2:5289417/140‑1 (MQ=255)

                                                                      aGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTcaca                                                                     <  1:2055362/140‑1 (MQ=255)

                                                                          ttGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATtat                                                                 <  2:3795044/140‑1 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               <  2:147051/140‑1 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               >  1:4066495/1‑140 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               >  1:5587915/1‑140 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               <  2:584166/140‑1 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               <  1:1928296/140‑1 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               >  2:5500276/1‑140 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               <  1:5359838/140‑1 (MQ=255)

                                                                            gATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATaa                                                               <  1:4700425/140‑1 (MQ=255)

                                                                             aTGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAACACGCCGATGATCGCCGGAGCTTTTACACAGACGGGCACCGGCTGCATGAATTTCTGCATGAAAGCACCGAAAAGGTGTATTAACAGtatacc                                                              >  2:4962866/1‑138 (MQ=255)

                                                                                  aTTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGGATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTAt                                                         >  1:1525800/1‑140 (MQ=255)

                                                                                    tAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGCAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGa                                                       <  1:366585/140‑1 (MQ=255)

                                                                                    tAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGa                                                       >  1:4277417/1‑140 (MQ=255)

                                                                                      aCCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGAcg                                                     <  1:5523308/140‑1 (MQ=255)

                                                                                      aCCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGAcg                                                     <  1:5672501/140‑1 (MQ=255)

                                                                                          gATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGAcggtcg                                                 >  1:895360/1‑140 (MQ=255)

                                                                                           aTTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         >  2:2373572/1‑115 (MQ=255)

                                                                                           aTTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGtttt                                                                         <  1:2373572/115‑1 (MQ=255)

                                                                                           aTTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGAcggtcgg                                                >  1:385528/1‑140 (MQ=255)

                                                                                           aTTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGAcggtcgg                                                >  1:746515/1‑140 (MQ=255)

                                                                                           aTTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGAcggtcgg                                                >  1:4182206/1‑140 (MQ=255)

                                                                                               cTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTgag                                            <  2:2494892/140‑1 (MQ=255)

                                                                                                 aaaGATCAGCGCTGTCCGAAGGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATGTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGAt                                          <  2:66860/140‑1 (MQ=255)

                                                                                                    gATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTc                                       <  1:1988076/140‑1 (MQ=255)

                                                                                                       cAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTc                                    <  2:5031605/140‑1 (MQ=255)

                                                                                                         gcgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaa                                  <  1:5121772/140‑1 (MQ=255)

                                                                                                          cgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaac                                 <  2:4066495/140‑1 (MQ=255)

                                                                                                          cgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaac                                 >  2:3319978/1‑140 (MQ=255)

                                                                                                          cgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaac                                 <  1:3563113/140‑1 (MQ=255)

                                                                                                          cgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaac                                 <  2:2630038/140‑1 (MQ=255)

                                                                                                          cgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaac                                 <  2:255854/140‑1 (MQ=255)

                                                                                                          cgcTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaac                                 <  1:4924231/140‑1 (MQ=255)

                                                                                                              gtCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACt                             <  1:4370249/139‑1 (MQ=255)

                                                                                                                    aTGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACTGTAGAt                       <  2:3439341/140‑1 (MQ=255)

                                                                                                                         gAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACTGTAGATCATTg                  >  1:1598245/1‑140 (MQ=255)

                                                                                                                             aCGGCGATGATGGCCTTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACTGTAGATCATTGCAtt              <  2:121723/140‑1 (MQ=255)

                                                                                                                                 cGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTcaa                                  >  1:1783507/1‑116 (MQ=255)

                                                                                                                                         gCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACTGTAGATCATTGCATTCGATATACAAAt  >  2:2226258/1‑140 (MQ=255)

AAATGAAGAGGTCAGAAAGCATGTCTATGATATGATGCATTTTTGGTTTGAAAAGGGAATAGACGGCTTCAGGCTTGATGTCATTAACCTGATTTCTAAAGATCAGCGCTTTCCGAATGTGGAAGACGGCGATGATGGCCGTAGCTTTTACACTGACGGGCCGCGGGTGCATGAATTTCTGCATGAAATGAACGAAAAGGTGTTTTCACATTATAACAGTATGACGGTCGGTGAGATGTCTTCAACAACTGTAGATCATTGCATTCGATATACAAAT  >  NZ_CP034943/829089‑829365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.