| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2649132 | 149 (0.410) | 317 (0.900) | 171/292 | 1.2 | 58.1% | intergenic (+274/+260) | RPPX_11785/putA | hypothetical protein/transcriptional regulator |
| ? | CP009974 | = 3847686 | 312 (0.880) | intergenic (+199/‑141) | RPPX_17150/RPPX_17155 | tRNA‑dihydrouridine synthase C/heat‑shock protein | |||||
Only 100 of 660 total aligned reads displayed.
GCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGTTTATGACCATGACTACTG > CP009974/3847536‑3847836 | gccggccCTGCTGGCCAATCTCCCCCCGTCGTTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAaga < 1:4600619/151‑1 (MQ=17)gccggccCTGCTGGCCAATCCTCACCCGCCGTTCACCGATGCCGCCGCTGCCGTATTCGCGGGTGAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAaga < 1:4860444/151‑1 (MQ=14) cGGCCCTGCTGGCCAATTACCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGCGGG‑CGCAGGCCGTCGCGTAGGAGCGGGTTTACCCGCGAAGAggc < 2:1427380‑M2/151‑4 (MQ=255) ggCCCTGCTGGCCAATTACCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGCGGG‑CGCAGGCCGTCGTGTAGGGGCGGGTTTACCCGCGAAGAggcc < 1:3075565‑M2/151‑5 (MQ=255) gCCCTGCTGGCCAATCTCCACCCGTCGTTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggcc > 1:4218967‑M2/1‑147 (MQ=255) ccTGCTGGCCAATTTTCACCCGCCGTTCACTGTTGCCGCCGCTGCCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccgg > 1:951611‑M2/1‑145 (MQ=255) ctgctgGCCAATCTCCACCCGTCGTTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggc > 1:2464857‑M2/1‑144 (MQ=255) ctgctgGCCAATCTCCACCCGTCGTTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGGGTAGGAGCGGGGTTACCAGCGAAGAggccggc < 2:5132705‑M2/151‑8 (MQ=255) tgctgGCCAATCTCCACCCGTCGTTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggct < 2:4864442‑M2/151‑9 (MQ=255) ctgGCCAATTTTCGCCCGCCGTTCACGGTTGCCGGCGCTGCCGTATTCGCGGGTAAGCCCGCTCCTTCGCTTGATCGAGGATCGGCGCCCGCCGGTAGCTGGGCACTGGCCGTCGTGTAGGAGCGGGTTTTCTCGCGAAGAGGccggccct < 2:4449681/151‑7 (MQ=0) ctgGCCAATTACCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCGTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAAc < 1:5742268/151‑1 (MQ=17) tgGCCAATCTCCACCCGTCGTTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggcgctg < 1:6749998‑M2/151‑12 (MQ=255) gggcCAATCTCCACGGGCCGTGCACTGCTGCCGCCGCTGCCGTATTCGCGGGTGAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggcccta > 1:2268411‑M2/2‑140 (MQ=255) ccAATCTCCGCCGGTCGTTCAACGTTGCCGCCACCACCGTATCCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctg > 2:4692539‑M2/1‑137 (MQ=255) aaTTACCGCCCGCCGTTCACTGTTCCGGATGCTACCGGATTCGCGGGTAGACCCGCTCCTATGTGGGATGGAGGATGGACACGGGTGGGTGG‑GGGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTg < 1:1000119/151‑1 (MQ=17) tCCGCCCGTCGGTCGACGTTCCCGCGCCCACCGTATTCGCGGGTAACCCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaat > 2:4238580‑M2/1‑131 (MQ=255) cccccgtCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatct > 2:5745336‑M2/3‑129 (MQ=255) cACCCGCCGTTTACCGTTGTCGTTCCTGCCGTATTCGGGAGTAAACTCGCTCCTACGACTCATCGAGGATGAACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCaaaaa < 1:3379489/151‑1 (MQ=18) cctcgcggTTCACCGTTGGCTCTGCGACCGTAGTCGGGGGTTGGCCCGCTCTTAGGCGTGTTCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCaaaaaa < 1:3622578/148‑1 (MQ=18) cgtcgtTCAACGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccac > 2:1868051‑M2/1‑125 (MQ=255) cgTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAAtt > 2:1948066/1‑151 (MQ=255) ttCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAAtttt > 2:3992958/1‑151 (MQ=255) cGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCCCTCCTACGCCTGACCGAGGATGGACACAGGTGGGGGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTa < 1:6604668/151‑1 (MQ=21) gTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcac < 1:4750746‑M2/151‑38 (MQ=255) gTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgctcac < 2:926966‑M2/151‑38 (MQ=255) ttGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcacc > 1:3960902‑M2/1‑113 (MQ=255) ctgctACCGTATTCGCGGGTAAGCCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTAcccc < 2:2347444/151‑1 (MQ=255) ccaccGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccggcgttcaccgttgccgcc < 1:5641637‑M2/149‑48 (MQ=255) cacCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccc < 1:1103269‑M2/150‑49 (MQ=255) aCCGTATTCGCGGGTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGCGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGaa > 2:3310943/1‑151 (MQ=255) gTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGCCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgtcgccgccccccc < 2:6368673‑M2/151‑53 (MQ=255) gcgGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtatt < 1:5387344‑M2/151‑59 (MQ=255) cgGGTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTccc > 1:5197009/1‑151 (MQ=255) gggTAAACCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCt < 1:3519450/151‑1 (MQ=255) gggTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcg < 1:5240548‑M2/151‑61 (MQ=255) ggTAAGCCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTc < 2:289768/151‑1 (MQ=255) gTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCGCAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCAATCCCGGTCCAAAAACAAACTTTTTTCACACTACCCCTTGCAACCGTTTccccc > 2:2119532/1‑149 (MQ=17) accccGCTCCTACGCCTGATGGAGGTTGGACACAGGTCGGTGG‑GGGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGcc < 1:1675130/149‑1 (MQ=37) aCCCGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCa > 1:1495565/1‑151 (MQ=255) ccGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGGTGACCCGCGCAGAGGCCATCGAACCCCGTGCAACAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCata > 2:3671796/1‑151 (MQ=37) ccGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaa < 1:1208894‑M2/151‑69 (MQ=255) cGCTCCTACGCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGGGCGGGGTGACGCGCGAAGAGGTCATCAAACCCCGAGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCatat > 2:1693816/1‑151 (MQ=255) cGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCaaa < 1:817523/102‑1 (MQ=255) gCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacc < 1:6890247‑M2/151‑71 (MQ=255) cTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggcgaatctccacccgccgctcaccgttgcggccagcaccgtgttcgcgaggagacccgct < 2:2773486‑M2/151‑75 (MQ=255) aCGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctct < 2:607344‑M2/151‑77 (MQ=255) gCCTGATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGt > 1:6673072/1‑151 (MQ=255) gCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctgg > 1:2990234‑M2/1‑73 (MQ=255) cctgATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTa > 1:996154/4‑151 (MQ=255) ccGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggt < 2:3527518‑M2/151‑80 (MQ=255) gATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggcgctgctggccaatctccacccgccgttcaccgttgcccccaccgccctgttcgccggtaaacccgccctggcggt < 2:3253143‑M2/151‑83 (MQ=255) gATCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCCTATCTTTTGAGTAcgc > 1:5893391/1‑151 (MQ=255) aTCGAGGATGGACACAGGTCGGTGGCGGGGCCCAGGCCGTCGTGAAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTAcgc > 1:5505041/1‑151 (MQ=255) tCGAGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGa > 1:7050813/1‑151 (MQ=255) gAGGGTGGACACAGGTCGGTGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTGCCCGCGAAGAGGCCATCAAACCCCGTGc < 2:1600111/83‑1 (MQ=14) aGGATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGc < 1:3220407/151‑1 (MQ=255) ggATGGACACAGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGcc > 1:1908455/1‑151 (MQ=255) gAGGGCCACAGGGTGGTGGCGGTGCACAGGGCGGCTGGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacat > 2:3874404‑M2/1‑62 (MQ=255) cacaGGTCGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCg > 2:6608269/1‑151 (MQ=255) cacaGGTCGGTGATTGGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTAcccc < 1:4965337/101‑1 (MQ=21) cacaGGTCGGTGATTGGGCGCAGGCCGCCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTAcccc > 2:4965337/1‑101 (MQ=18) gtgggTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTcg < 1:4803105/148‑1 (MQ=255) tCGGTGGCGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCa > 1:2689130/1‑117 (MQ=255) gcGGTGGC‑GGGCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTcgc < 2:5526015/150‑1 (MQ=255) cGGTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggaca < 1:4000058‑M2/151‑103 (MQ=255) gTGGCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacaca < 1:1591530‑M2/151‑105 (MQ=255) ggCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacagg < 2:43426‑M2/151‑107 (MQ=255) ggCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacagg < 1:3714027‑M2/151‑107 (MQ=255) gccggGGCACAGAGCCCCGCGTAGGAGCGGGTTCACCCGCGAAGAggccggccctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacagg > 1:2170893‑M2/3‑45 (MQ=255) ggcgggCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAAt > 2:2581974/4‑151 (MQ=255) gCGGGGCACAGGGCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggc > 1:5311858‑M2/1‑44 (MQ=255) gcgggCGCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATg < 2:2192820/149‑1 (MQ=255) ggCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAAtttt > 2:5931099/1‑72 (MQ=255) aGGGCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggg < 1:2064110‑M2/151‑117 (MQ=255) aGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGacttactt > 2:1023949/1‑151 (MQ=255) aGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGacttactt < 2:5260381/151‑1 (MQ=255) aGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGacttactt < 1:4509604/151‑1 (MQ=255) ccGTCGTGTAGGAGCGGGTTTACCCGCGAAGAggccggccctgctggccaatctccacccgcc > 2:7057844‑M2/1‑32 (MQ=255) cgtcgtGTAGGAGCGGGTTTACCCGCGAAGAggccggccctgctggccaatctcc > 1:1812756‑M2/1‑31 (MQ=255) cgtcgtGTAGGAGCGGGTTTACCCGCGAAGAggccggccct > 2:6239218‑M2/1‑31 (MQ=255) cgtGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGaaa > 1:6265036/1‑79 (MQ=255) gtgtAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAAtc > 2:775253/1‑151 (MQ=255) tgtAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtcgggttttcccg < 2:2966231‑M2/151‑126 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccg < 1:4355187‑M2/133‑110 (MQ=255) tAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCa > 2:2449736/1‑151 (MQ=255) ggAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaa < 1:6071025‑M2/151‑130 (MQ=255) gggcgGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaa > 1:3827681‑M2/3‑21 (MQ=255) gAGCGGGTTTACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaa > 1:4561684‑M2/1‑21 (MQ=255) ggggTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGtt < 2:6845781/150‑1 (MQ=255) gTTTCCCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGTTTAt < 1:6460539/151‑1 (MQ=255) tttACCCGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaaggacccg < 1:2346610‑M2/151‑138 (MQ=255) ccGCGAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaaggacccgtccag > 1:5835021‑M2/1‑9 (MQ=255) ccGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGTTTATGACCAt > 2:4130740/1‑151 (MQ=255) ggcgaAGAggccggctctgctggccaatctccacccgccgtacaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacatggggggttggacacaggccgctgtggggttttcccgcgaaaggacccgtccaga > 1:3554989‑M2/2‑8 (MQ=255) cgcgAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGTTTATGACCATg < 1:512699/151‑1 (MQ=255) gAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaaggacccgtccagacag < 2:119466‑M2/151‑147 (MQ=255) gAAGAggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaaggacccgtccagacag > 2:4762882‑M2/1‑5 (MQ=255) gAAGAggccggccctgctggccaatctccacccgccgttcactgtt > 1:1394092‑M2/1‑5 (MQ=255) aaGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGTTTATGACCATGacta > 1:6356108/1‑151 (MQ=255) aggccggctctgctggccaatctccacccgccgttcaccgttgccgccaccaccgtattcgcgggtaaacccgctctggtggacacacattgggggttggacacaggccgctgtggggttttcccgcgaaaggacccgtccagacagacat < 1:2788574‑M2/151‑151 (MQ=255) | GCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCTGCTACCGTATTCGCGGGTAAACCCGCTCCTACGCCGGATCGAGGATGGACACAGGTCGGTGGCGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCAAACCCCGTGCAAAAAACAAATTTTTTCTAACTACCCCTTGAAAGCATTTCCCTCGGCCATATCTTTTGAGTACGCGATGCCGAAGCCGGGTCGCGTAATGACTTACTTGCTGAATCTCAGGAGTTTATGACCATGACTACTG > CP009974/3847536‑3847836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |