Predicted mutation
evidence seq id position mutation annotation gene description
JC JC CP009974 3,288,192 ISS12 (–) +7 bp :: +A intergenic (‑185/‑66) RPPX_14645 ← / → RPPX_14650 antibiotic transporter/TetR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 2756352 =NA (NA)331 (1.220) 192/300 0.0 100% noncoding (2595/2595 nt) ISS12 repeat region
?CP009974 = 3288198 0 (0.000)intergenic (‑191/‑66) RPPX_14645/RPPX_14650 antibiotic transporter/TetR family transcriptional regulator
* ? CP009974 3288192 =0 (0.000)280 (1.030) 170/300 0.2 100% intergenic (‑185/‑72) RPPX_14645/RPPX_14650 antibiotic transporter/TetR family transcriptional regulator
?CP009974 3486773 = NA (NA)intergenic (+359/‑203) RPPX_15550/RPPX_15555 RNA polymerase sigma factor/integrase

Only 100 of 280 total aligned reads displayed.

CTTGTAGAAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009974/3288341‑3288192
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  CP009974/3486773‑3486922
                                                                                                                                                                                                                                                                                                            
 TTGTAGAAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTG                                                                                                                                                      >  1:95081/1‑151
 TTGTAGAAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTG                                                                                                                                                      <  1:2847753/151‑1
    TAGAAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCCGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGG                                                                                                                                                   >  2:3581425/1‑151
    TAGAAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGCACGCTCCGAGGGCTCCTGCGCCGGGGCTGCGG                                                                                                                                                   >  2:4205896/1‑151
       AAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATT                                                                                                                                                >  1:2355556/1‑151
        AGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGGACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTC                                                                                                                                               >  2:4050277/1‑151
        AGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTC                                                                                                                                               <  2:1468844/151‑1
        AGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTC                                                                                                                                               >  1:2679755/1‑151
        AGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCCGCGGATTC                                                                                                                                               >  2:3044766/1‑151
        AGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCCCCTCTGCCGGGGCTGCGGACTC                                                                                                                                               >  2:4194804/1‑151
         GGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCCTGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCC                                                                                                                                              >  2:5071757/1‑151
         GGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCC                                                                                                                                              <  2:4809089/151‑1
           CCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCAC                                                                                                                                            <  1:2136495/151‑1
              TTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCT                                                                                                                                         >  1:2990071/1‑151
                TCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGA                                                                                                                                       >  2:2256583/1‑151
                 CCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGAC                                                                                                                                      <  1:4729068/151‑1
                 CCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGAC                                                                                                                                      <  1:1305396/151‑1
                     CGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGG                                                                                                                                  >  2:2970722/1‑151
                     CGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGG                                                                                                                                  <  2:948426/151‑1
                        CTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACA                                                                                                                               <  2:3427314/151‑1
                        CTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACA                                                                                                                               >  2:2376799/1‑151
                        CTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACA                                                                                                                               >  1:1682041/1‑151
                         TCGATGCTCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACAC                                                                                                                              <  2:5323105/151‑1
                          CGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACC                                                                                                                             >  1:3275055/1‑151
                             TGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGACAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCAT                                                                                                                          <  1:1065450/151‑1
                                TCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCC                                                                                                                       <  2:1839330/151‑1
                                 CTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCA                                                                                                                      <  2:87080/151‑1
                                 CTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCA                                                                                                                      >  1:4310294/1‑151
                                 CTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACC                                                                                                                             <  1:450896/144‑1
                                   GGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACG                                                                                                                    <  1:4037734/151‑1
                                   GGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACG                                                                                                                    <  1:1881113/151‑1
                                   GGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACG                                                                                                                    >  1:140124/1‑151
                                    GGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGC                                                                                                                   <  2:1744908/151‑1
                                    GGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGC                                                                                                                   <  2:2604098/151‑1
                                    GGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGC                                                                                                                   >  2:399733/1‑151
                                      CACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGTGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGC                                                                                                                 <  2:4549773/151‑1
                                        CGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCAT                                                                                                               <  2:4610187/151‑1
                                         GGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATC                                                                                                              >  1:5150606/1‑151
                                          GGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCC                                                                                                             <  1:3636900/151‑1
                                          GGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCC                                                                                                             <  1:3592379/151‑1
                                          GGTTGCCTGGGGTTCTTCTTTGGTTCGGCGGACCATGGCAGTACCACCTCAGCTGGCCCGAACGGGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACAGCCATTCCACGCGCATCC                                                                                                             <  2:3549388/151‑1
                                           GTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCG                                                                                                            >  2:1588375/1‑151
                                           GTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCG                                                                                                            <  1:3899934/151‑1
                                              TCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGAC                                                                                                         <  1:637004/151‑1
                                               CCTGGGCTTCTTCTTTGGTTCGACGGACCCTGGCAGTGCTTCCTGATCTGGGCCGAACGCGCAGCGCGGGCGGGGAGCGCTCCGAGGGCTGCTGTGCCGTGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACA                                                                                                        <  2:5431048/151‑1
                                                CTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAG                                                                                                       <  1:5264967/151‑1
                                                CTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAG                                                                                                       <  1:3698621/151‑1
                                                  GGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTG                                                                                                     <  2:3246463/151‑1
                                                     CTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATT                                                                                                  <  1:3511219/151‑1
                                                        CTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCA                                                                                               >  2:5123966/1‑151
                                                            TTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCT                                                                                           <  1:2724/151‑1
                                                            TTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCT                                                                                           >  2:1922864/1‑151
                                                                  TCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCG                                                                                     >  1:723635/1‑151
                                                                    GACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGA                                                                                   <  1:886069/151‑1
                                                                     ACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGAC                                                                                  >  1:1770746/1‑151
                                                                     ACGGACCATGGCAGTACAACCCCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGAC                                                                                  <  1:2777206/151‑1
                                                                       GGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACAC                                                                                >  1:1004888/1‑151
                                                                         ACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGATACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGCCACTC                                                                              >  2:5222197/1‑151
                                                                         ACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTC                                                                              <  1:288903/151‑1
                                                                           CATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCAT                                                                            >  2:4418091/1‑151
                                                                           CATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCAT                                                                            >  1:4191640/1‑151
                                                                            ATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATT                                                                           >  1:3828878/1‑151
                                                                             TGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTC                                                                          <  2:5263309/151‑1
                                                                                CAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCAC                                                                       <  2:3354807/151‑1
                                                                                CAGTAAAGCCTCATCTGGCCGGAACGCGGAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCAC                                                                       <  2:1135926/151‑1
                                                                                 AGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACG                                                                      >  1:906247/1‑151
                                                                                 AGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCAACCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACG                                                                      <  2:2662784/151‑1
                                                                                  GTACAGCCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGA                                                                     <  2:1230233/151‑1
                                                                                      AACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCAT                                                                 >  1:335213/1‑151
                                                                                       ACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATC                                                                >  2:383237/1‑151
                                                                                            ATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGAC                                                           >  2:2902784/1‑151
                                                                                              CTGGCTCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACAC                                                         >  1:4650667/1‑151
                                                                                              CTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACAC                                                         <  2:723635/151‑1
                                                                                               TGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACC                                                        >  1:2473187/1‑151
                                                                                                 GCCGGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGA                                                      <  2:608628/151‑1
                                                                                                    CGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCCTCCGTACACCGACTC                                                   >  2:131802/1‑151
                                                                                                      AACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCA                                                 <  1:5402136/151‑1
                                                                                                      AACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGACTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCA                                                 >  1:1745150/1‑151
                                                                                                       ACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCAC                                                <  2:4359644/151‑1
                                                                                                            CAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCA                                           <  2:310934/151‑1
                                                                                                             AGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCAT                                          >  1:4406271/1‑151
                                                                                                             AGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCAT                                          >  1:4972690/1‑151
                                                                                                                      GGGGAACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACT                                 >  1:1475261/1‑151
                                                                                                                          AACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTC                             <  2:4934158/151‑1
                                                                                                                           ACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACGGACTCCACGGTCATCCGGACACTTTcgt                            >  1:5047721/1‑148
                                                                                                                           ACGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCAGACACTTTTCT                            <  2:2131574/151‑1
                                                                                                                            CGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTG                           <  2:66468/151‑1
                                                                                                                            CGCTCCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGCCATCCGGACACTTTTCTG                           >  1:4011268/1‑151
                                                                                                                                CCGAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAG                       <  2:1673809/151‑1
                                                                                                                                  GAGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGC                     <  1:3249524/151‑1
                                                                                                                                   AGGGCTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCA                    <  1:479285/151‑1
                                                                                                                                       CTCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCA                <  1:664011/151‑1
                                                                                                                                        TCCTGTGCCGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCAC               <  2:3627619/151‑1
                                                                                                                                             cggccacGCTGCGGAGTCCACGCTGCGTCGGGCACCAATTCCGCGCGCACCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGG          <  2:5410913/144‑1
                                                                                                                                                CGGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATT       >  2:1627136/1‑151
                                                                                                                                                 GGGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTT      >  2:1542212/1‑151
                                                                                                                                                  GGGCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTA     >  1:1821642/1‑151
                                                                                                                                                    GCTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATT   >  1:2816733/1‑151
                                                                                                                                                     CTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  2:2717315/1‑151
                                                                                                                                                     CTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  1:3329902/1‑151
                                                                                                                                                                                                                                                                                                            
CTTGTAGAAGGCCCTTTCCGCCGCCTCGATGATCTGGGCACGGGTTTCCTGGGCTTCTTCTTTGGTTCGACGGACCATGGCAGTACAACCTCATCTGGCCCGAACGCGCAGCGCGGGCGGGGAACGCTCCGAGGGCTCCTGTGCCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009974/3288341‑3288192
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  CP009974/3486773‑3486922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.