| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | CP009974 | 3,288,192 | ISS12 (–) +7 bp :: +A | intergenic (‑185/‑66) | RPPX_14645 ← / → RPPX_14650 | antibiotic transporter/TetR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | 2756352 = | NA (NA) | 331 (1.220) | 192/300 | 0.0 | 100% | noncoding (2595/2595 nt) | ISS12 | repeat region |
| ? | CP009974 | = 3288198 | 0 (0.000) | intergenic (‑191/‑66) | RPPX_14645/RPPX_14650 | antibiotic transporter/TetR family transcriptional regulator | |||||
| * | ? | CP009974 | 3288192 = | 0 (0.000) | 280 (1.030) | 170/300 | 0.2 | 100% | intergenic (‑185/‑72) | RPPX_14645/RPPX_14650 | antibiotic transporter/TetR family transcriptional regulator |
| ? | CP009974 | 3486773 = | NA (NA) | intergenic (+359/‑203) | RPPX_15550/RPPX_15555 | RNA polymerase sigma factor/integrase | |||||
Only 100 of 607 total aligned reads displayed.
TAATGGAAGAGATCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGG > CP009974/3288048‑3288348 | aaTGGAAGAGATCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGt < 1:4703792‑M2/151‑2 (MQ=255) aaTGGAAGAGATCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGt > 1:454317‑M2/1‑150 (MQ=255) cctgcgtggctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGca < 2:3320958‑M1/9‑1 (MQ=255) aTGGAAGAGATCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtg < 1:3369087‑M2/151‑3 (MQ=255) aTGGAAGAGATCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtg > 1:1743762‑M2/1‑149 (MQ=255) agaTCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGGAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattc > 1:3459790‑M2/1‑142 (MQ=255) gctgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGcc > 1:5384382‑M1/135‑151 (MQ=255) tgcctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCt < 1:479285‑M1/19‑1 (MQ=255) tCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccac > 2:4461088‑M2/1‑139 (MQ=255) cctgccagaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCg > 1:4347937‑M1/131‑151 (MQ=255) tgccagaaaagtggccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGa > 2:4305640‑M1/129‑151 (MQ=255) aaaggaaaAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccatt > 2:233102‑M2/4‑133 (MQ=255) cagcgaagtgtccggatggccgtgggatcggtgtacggctgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtaggatccgcaGCCCCGGCACAGGAGCCCTCGGAGCg > 2:262432‑M1/126‑151 (MQ=255) cTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattc > 1:2237232‑M2/1‑132 (MQ=255) agaaaagtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGt < 1:877364‑M1/27‑1 (MQ=255) agtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTcccc > 1:1475261‑M1/120‑151 (MQ=255) aaaaTGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacac > 1:3317140‑M2/1‑126 (MQ=255) gtgtccggatgaccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCcccg < 2:3945412‑M1/33‑1 (MQ=255) aaTGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactc < 2:1786936‑M2/151‑28 (MQ=255) tGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcag < 1:3005783‑M2/151‑30 (MQ=255) tCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccac < 2:890210‑M2/151‑35 (MQ=255) cGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgc < 2:5290992‑M2/151‑37 (MQ=255) gccgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTgcg > 2:723068‑M1/108‑151 (MQ=255) cgtggagtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGcgcg < 1:2871884‑M1/46‑1 (MQ=255) gATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatc < 2:455862‑M2/151‑42 (MQ=255) agtcggtgtccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCgg < 1:3271401‑M1/51‑1 (MQ=255) aaTAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccgga < 2:1981423‑M2/151‑46 (MQ=255) tAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggaca > 1:1086702‑M2/1‑104 (MQ=255) cggtgtccggatgctcgtggaatgagtgtccggatcagggtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGcc > 2:5094012‑M1/98‑151 (MQ=255) cTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacct < 2:2160212‑M2/151‑51 (MQ=255) ttGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctg < 1:2418129‑M2/151‑52 (MQ=255) tccggatgctcgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATg < 1:2018976‑M1/59‑1 (MQ=255) tAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttcc > 1:3551602‑M2/1‑96 (MQ=255) tataCTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCGTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctca > 1:1613416‑M2/1‑89 (MQ=255) cgtggaatgagtgtccggatcagcgtggaatcactgtccggttgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACt < 2:2662784‑M1/69‑1 (MQ=255) cgtggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACt < 1:1834129‑M1/69‑1 (MQ=255) ggaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGcc < 2:4053489‑M1/72‑1 (MQ=255) gaatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCa > 2:3002428‑M1/79‑151 (MQ=255) aatgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCAt > 1:3828878‑M1/78‑151 (MQ=255) atgagtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATg > 1:4191640‑M1/77‑151 (MQ=255) gtgtccggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTcc > 1:1004888‑M1/73‑151 (MQ=255) cggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGa > 1:723635‑M1/68‑151 (MQ=255) ggatcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGCTCGCGCCAGATGAGGCTGTACTGCCATGGTCCGTCGaa < 2:1905186‑M1/85‑1 (MQ=255) tgtttgtAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcgga > 1:1233287‑M2/1‑71 (MQ=255) atcagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAAcc < 1:4059400‑M1/87‑1 (MQ=255) cagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCTCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCaa < 1:1367128‑M1/89‑1 (MQ=255) cagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCaa > 1:2317229‑M1/63‑151 (MQ=255) cagcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCaa < 1:3922949‑M1/89‑1 (MQ=255) ttgtAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcg > 2:2509992‑M2/1‑68 (MQ=255) ttgtAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcg < 2:1275705‑M2/151‑84 (MQ=255) gcgtggaatcactgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaag > 2:664011‑M1/61‑151 (MQ=255) ggggaatcacggtccggaggcgcgtggaatggctgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaagaa > 2:4377138‑M1/59‑151 (MQ=255) aaaTACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagc < 2:48687‑M2/151‑88 (MQ=255) aTACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcga < 1:2554977‑M2/151‑90 (MQ=255) ctgctgAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgc < 1:4008871‑M2/151‑93 (MQ=255) tgctgAGTTGTACTCAGGTACCCCTCGGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgca > 2:1708054‑M2/1‑58 (MQ=255) ggctgaGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgca > 2:3683535‑M2/2‑58 (MQ=255) ctgAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacccagg < 2:5319716‑M2/151‑96 (MQ=255) ctgAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgacccggacacccgttccccgcccattcgcacaggcagtcggagcgcagccacgcagg < 2:1178314‑M2/151‑96 (MQ=255) tgtccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCACGGCACAGCAGCCCTCGGAGCGCTCCCCGCCCGCGCTGCGCGTTCGGCCCAGATCAGGAAGCACTGCCAGGGTCCGTCGAACCAAAGAAGAAGCCCAgg < 2:5431048‑M1/103‑1 (MQ=255) tccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGaa > 1:2644718‑M1/47‑151 (MQ=255) gTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtg > 2:3986984‑M2/1‑52 (MQ=255) ccggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGaaa < 1:2703013‑M1/106‑1 (MQ=255) ttGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacaccagttccacgctcattcggacaggccgtcggagcgcagcgacgcaggggtgg < 2:5222332‑M2/151‑101 (MQ=255) cggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAAc > 2:1588375‑M1/45‑151 (MQ=255) ggatgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAAcc < 1:3636900‑M1/108‑1 (MQ=255) atgcgcgtggaatgggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCg < 2:4610796‑M1/110‑1 (MQ=255) aCTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcatt < 2:2438436‑M2/151‑105 (MQ=255) aCTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcatt < 2:1364924‑M2/151‑105 (MQ=255) cTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcat > 2:1037979‑M2/1‑46 (MQ=255) cAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgtt > 2:22436‑M2/1‑44 (MQ=255) aGGTAGCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgtta > 1:1397301‑M2/1‑43 (MQ=255) aGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgtta < 2:1479077‑M2/151‑109 (MQ=255) aGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgtta < 2:4233414‑M2/151‑109 (MQ=255) gttacCCGTCAGCGCTTGATTGGCTCATCCGAGAGGCCCCGGtgcggattccccgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttag > 2:2856300‑M2/3‑42 (MQ=255) ggTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccaccctcattcgcacaggcaggcggagcgcagcgactcaggggtggcattggtag < 1:1917885‑M2/151‑110 (MQ=255) tACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtc < 1:5118683‑M2/151‑112 (MQ=255) ggggtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGatcat > 2:4960657‑M1/30‑151 (MQ=255) gtgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCCAAGAAGAAGACCAGGAACCCCGTGCCCagatcatcca < 2:3573727‑M1/125‑3 (MQ=255) tgtccgagtcagcgtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAg < 2:3427314‑M1/126‑1 (MQ=255) aGCGCTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttgg < 1:5013291‑M2/151‑120 (MQ=255) gcTTGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggccttgttagtccgggttggctg < 2:3820920‑M2/151‑123 (MQ=255) tGATTAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcg < 1:5220157‑M2/151‑126 (MQ=255) tAGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgt > 1:957719‑M2/1‑22 (MQ=255) aGCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtc < 1:5276485‑M2/151‑131 (MQ=255) gCTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtca < 2:27736‑M2/151‑132 (MQ=255) gtggaatccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAggg < 1:2136495‑M1/139‑1 (MQ=255) cTCATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtcctggttggctggcgtcgtcaa > 2:477782‑M2/1‑19 (MQ=255) tCATCCGAGAGGCGCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcggtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaat > 2:3062221‑M2/1‑18 (MQ=255) cATCCGAGAGGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatt > 1:2827741‑M2/1‑17 (MQ=255) tccgcaGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTtcc > 1:655836‑M1/7‑150 (MQ=255) cGAGAGGCCCGGGtgcggattccacgccattcggccactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatttctg > 1:2769638‑M2/1‑13 (MQ=255) gagGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatttctgcgt > 1:4469691‑M2/1‑10 (MQ=255) gagGCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatttctgcgt > 2:786484‑M2/1‑10 (MQ=255) ggCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatttctgcgtcc < 1:3215433‑M2/151‑144 (MQ=255) ggCCCCGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagccggagcgcagcgccgcaggggcggcattgtcagtccgggtcggctggcgtcgtcaatttctgcgtcc < 2:5381162‑M2/151‑144 (MQ=255) gCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgc > 2:4175896/1‑151 (MQ=255) ccccGGtgcggattccacgccattcggacactcagcccacgctgatccggacacctgttccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatttctgcgtccgt > 1:5434602‑M2/1‑6 (MQ=255) ccccGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAgcg < 1:908550/151‑1 (MQ=255) ggtgcggattccacgccattcggacactcagcccacgctgatccggacacctattccacgctcattcggacaggcagtcggagcgcagcgacgcaggggtggcattgttagtccgggttggctggcgtcgtcaatttctgcgtccgtttgc > 2:3502403‑M2/1‑2 (MQ=255) | TAATGGAAGAGATCTTGATCTGGAAAAAATGCTATCCGGTGGATAAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGAGTTGTACTCAGGTACCCCTCAGCGCTTGATTAGCTCATCCGAGAGGCCCCGGCACAGGAGCCCTCGGAGCGTTCCCCGCCCGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGG > CP009974/3288048‑3288348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |