Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	U00096	1,618,868	IS2 (–) +5 bp	coding (37‑41/666 nt)	marC ←	inner membrane protein MarC

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	1618868 =	1 (0.010)	121 (1.170)	90/292	0.1	99.2%	coding (41/666 nt)	marC	inner membrane protein MarC
	?	U00096	= 2070271	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region
*	?	U00096	= 1618872	1 (0.010)	77 (0.750)	63/292	1.0	98.7%	coding (37/666 nt)	marC	inner membrane protein MarC
	?	U00096	= 1651548	NA (NA)					noncoding (706/706 nt)	IS2	repeat region

GGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  U00096/1618726‑1618872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG  <  U00096/1651548‑1651401                                                                                                                                                                                                                                                                                                         GGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTG                                                                                                                                                    >  2:1112758/1‑149   CGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGG                                                                                                                                                   <  1:549838/148‑1    GTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGTCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACCGCACTGGAT                                                                                                                                                 >  1:549837/1‑149      AATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACTATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTT                                                                                                                                               <  1:549839/149‑1      AATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTT                                                                                                                                               <  2:549840/149‑1             CACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTA                                                                                                                                        >  1:1112753/1‑149              ACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTAT                                                                                                                                       <  2:549841/149‑1              ACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTAT                                                                                                                                       >  1:562278/1‑149                 ATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATT                                                                                                                                    <  2:549842/149‑1                       ATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGA                                                                                                                              <  2:549843/149‑1                          GCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGAC                                                                                                                             <  1:549844/147‑1                           CAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATC                                                                                                                          <  2:549845/149‑1                            AAATACGTACACCGAGGCCATAAAAGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCATGCCAATAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCT                                                                                                                         <  1:549846/149‑1                              ATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGATCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGT                                                                                                                       <  2:549847/149‑1                               TACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATC                                                                                                                          <  1:549848/145‑1                                ACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTA                                                                                                                     >  2:1112665/1‑149                                     CACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                                                                                <  2:549849/149‑1                                      ACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTT                                                                                                               <  1:549850/149‑1                                      ACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                                                                                >  1:1112718/1‑148                                       CCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTA                                                                                                              <  1:549852/149‑1                                            GCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCA                                                                                                         >  2:1608483/1‑149                                              CATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAATGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATT                                                                                                       >  2:1608449/1‑149                                                  AACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAA                                                                                                   <  2:549853/149‑1                                                  AACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAA                                                                                                   <  1:549854/149‑1                                                    CGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGC                                                                                                 <  2:549855/149‑1                                                       CTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCG                                                                                              >  2:1112726/1‑149                                                        TGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGC                                                                                             >  2:1112727/1‑149                                                        TGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGC                                                                                             <  2:549856/149‑1                                                          ACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCT                                                                                            <  1:549857/148‑1                                                                   TTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATA                                                                                  <  2:549858/149‑1                                                                       GCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCC                                                                              <  2:549859/149‑1                                                                        CACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTCACCCATTACAAGCCCGCTGCCGCAGATAGTCCC                                                                             >  2:562245/1‑149                                                                              TCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCG                                                                       >  1:1112784/1‑149                                                                              TCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGC                                                                        >  1:1608440/1‑148                                                                               CATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGA                                                                      <  2:1112781/149‑1                                                                                 TGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGC                                                                    <  1:1112779/149‑1                                                                                   TTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGA                                                                  <  2:1112777/149‑1                                                                                    TGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGAT                                                                 >  1:1112778/1‑149                                                                                     GCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATA                                                                <  2:1112776/149‑1                                                                                         GCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCC                                                            >  2:1608431/1‑149                                                                                            AGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGC                                                         <  2:1112770/149‑1                                                                                             GGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCG                                                        >  1:1112772/1‑149                                                                                             GGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCAAGCG                                                        >  1:1112771/1‑149                                                                                                CAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAC                                                     >  2:1608460/1‑149                                                                                                  AGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA                                                   <  1:1112768/149‑1                                                                                                    AAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATG                                                 >  2:1112765/1‑149                                                                                                     AATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATATGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGC                                                <  2:1112764/149‑1                                                                                                              ACAGTTGTTAATGGGTTAGCTAACGGCAGCTACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCAT                                       <  2:1112760/149‑1                                                                                                              ACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCAT                                       >  2:1112762/1‑149                                                                                                               CAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATT                                      >  2:1112761/1‑149                                                                                                                AGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTC                                     >  2:1112759/1‑149                                                                                                                AGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTC                                     <  1:1112758/149‑1                                                                                                                  TTGTTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGT                                   >  2:1112757/1‑149                                                                                                                   gGTTAATGGGTTAGCTAACGGCAGCAACACCACTGTATTTGCTCCTATATTTCCAGACATCTGTTATCTCTTAACCCATTACAAGACCGCTGCCGCTGATATTCCCGTGGCGAGCGATAACCCATCGCACTATGCGGATGCCATTCGTT                                  <  2:549825/148‑1                                                                                                                     TTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTAT                                >  2:1112754/1‑149                                                                                                                     TTAATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTAT                                <  2:1112753/149‑1                                                                                                                       AATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAA                              >  2:1608437/1‑149                                                                                                                       AATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAA                              >  2:1112752/1‑149                                                                                                                       AATGGGTTAGCTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAA                              <  2:1112750/149‑1                                                                                                                          gcGTTAGCTAACGGCAGCAACACCACGGGATTTGCCCCTATAATTCCAGACATCTGTTATCACTTCACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGACAACCCCGCGCACTATGCGGATGCCATGCGTTATAATGC                           <  2:549837/147‑1                                                                                                                                 CTAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGC                                          <  1:1112763/127‑1                                                                                                                                  TAACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACG                    >  1:1112743/1‑148                                                                                                                                   AACGGCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCC                  >  2:1112741/1‑149                                                                                                                                      actttacACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCT               <  1:1662608/142‑1                                                                                                                                       GCAGCAACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCT               <  1:1112739/148‑1                                                                                                                                            AACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGG         >  2:1112734/1‑149                                                                                                                                             ACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT        >  2:1112732/1‑149                                                                                                                                             ACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT        >  1:1112733/1‑149                                                                                                                                             ACACCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCAATCGTTATAATGCTCGAACGCCTCTGCAAGGT        >  1:1112731/1‑149                                                                                                                                                CCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT     >  1:1112728/1‑149                                                                                                                                                CCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT     <  1:1112727/149‑1                                                                                                                                                CCACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT     <  1:1112726/149‑1                                                                                                                                                 CACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCT     >  1:1112729/1‑148                                                                                                                                                  ACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT   >  2:1112725/1‑149                                                                                                                                                  ACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCA‑TACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG  >  2:1112723/1‑149                                                                                                                                                   CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG  >  2:1112724/1‑149                                                                                                                                                   CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTT   <  1:708553/148‑1                                                                                                                                                                                                                                                                                                         GGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  U00096/1618726‑1618872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTG  <  U00096/1651548‑1651401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.