Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | U00096 | 1,618,499 | Δ7 bp | coding (404‑410/666 nt) | marC ← | inner membrane protein MarC |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | U00096 | 1618499 | 1618505 | 7 | 56 [0] | [0] 55 | marC | inner membrane protein MarC |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | U00096 | = 1618498 | 0 (0.000) | 55 (0.620) | 40/290 | 2.2 | 100% | coding (411/666 nt) | marC | inner membrane protein MarC |
? | U00096 | 1618506 = | 0 (0.000) | coding (403/666 nt) | marC | inner membrane protein MarC |
CGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGA > U00096/1618361‑1618649 | cacaagccgcataattgcgccggagctgcgtaggctgccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTg < 1:471732‑M2/2‑1 (MQ=255) ccagccgcataattgcgccggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGt > 1:471775‑M2/144‑147 (MQ=255) cagccgcataattgcgccggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTc < 1:471733‑M2/6‑1 (MQ=255) cgcataattgcgccggagctgcgtaggcgtccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCgg < 2:471734‑M2/10‑1 (MQ=255) ttgcgccggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCa > 1:471773‑M2/132‑148 (MQ=255) cggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACtt < 1:471735‑M2/23‑1 (MQ=255) cggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACtt < 2:471736‑M2/23‑1 (MQ=255) ggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatccgcggctgcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACtt < 1:471737‑M2/23‑1 (MQ=255) ggagctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTg < 2:471738‑M2/24‑1 (MQ=255) ctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCAt < 2:471739‑M2/28‑1 (MQ=255) ctgcgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCAt < 2:471740‑M2/28‑1 (MQ=255) cgtaggcttccccacaaaatatccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatccgcgaaggtggaactctgcagcactgaggacgccgagctaataatcTGCTTCCCGAACCGGCAGTACTTGGCATTGc > 2:471799‑M2/118‑148 (MQ=255) cgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGc > 2:471741‑M2/118‑148 (MQ=255) cgtaggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGc > 1:471778‑M2/118‑148 (MQ=255) gtaggcttccccacaaaataaccgccaccaggaaaaagatcatcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgatctaataatcTGGTTCCCGGACCGGCAGTACtt < 1:471743‑M2/23‑1 (MQ=255) gtaggcttccccacaaaataaccgccaccaggaaaaagagcatcggcggcgcaaccatcagtacccaatcatctaaggtttaactctgactcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACtt < 1:471744‑M2/23‑1 (MQ=255) taggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGCCCGGCAGTACTTTGCATTGCCa > 2:471765‑M2/116‑148 (MQ=255) aggcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAg < 1:471746‑M2/34‑1 (MQ=255) gcttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCg < 1:692372‑M2/36‑1 (MQ=255) cttccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCgg > 2:471785‑M2/112‑148 (MQ=255) ccccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGcac > 1:471800‑M2/109‑148 (MQ=255) ccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACaa > 2:471777‑M2/107‑148 (MQ=255) ccacaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGCTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACaa > 1:471786‑M2/107‑148 (MQ=255) cacaaaataaccgccacaaggaaaaagatcagcggcggcgcaaccatcagtacacaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACAGTCAGTACTTGGCATTGCCAGCGGCACaaa > 1:471764‑M2/106‑148 (MQ=255) acaaaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAg > 1:471788‑M2/105‑148 (MQ=255) aaataaccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCa > 2:471793‑M2/102‑148 (MQ=255) accgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATAtt < 2:471747‑M2/52‑1 (MQ=255) ccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTg < 2:471749‑M2/53‑1 (MQ=255) ccgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTg < 2:471748‑M2/53‑1 (MQ=255) cgccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTgg > 2:471791‑M2/95‑148 (MQ=255) gccaccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGc < 2:471750‑M2/55‑1 (MQ=255) caccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCAc < 2:471751‑M2/57‑1 (MQ=255) ccaggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTg > 2:471795‑M2/90‑148 (MQ=255) caggaaaaagatcagcggcggcgccaccatcagtacccaatcagcgaaggttgatctctgacgcactgtggacgccgagctattaatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCCCTgg > 1:471762‑M2/89‑148 (MQ=255) caggaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTgg > 2:471770‑M2/89‑148 (MQ=255) gaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAatat > 1:471752‑M2/86‑136 (MQ=255) gaaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGtt < 2:471753‑M2/63‑1 (MQ=255) aaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaatgttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGAAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTc < 1:471755‑M2/64‑1 (MQ=255) aaaaagatcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTc < 2:471754‑M2/64‑1 (MQ=255) atccgcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTc < 2:471757‑M2/70‑1 (MQ=255) atcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTc < 2:471758‑M2/70‑1 (MQ=255) atcagcggcggcgcaaccatcagtacccaatcagcgaaggttgaacgctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTc < 1:471756‑M2/70‑1 (MQ=255) cagcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTcc < 1:471759‑M2/71‑1 (MQ=255) agcggcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAg > 1:471790‑M2/76‑148 (MQ=255) gcggcgcaaccatcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGctct > 2:471792‑M2/72‑148 (MQ=255) atcagtacccaatcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCt > 2:471796‑M2/61‑148 (MQ=255) atcagcgaaggttgaactctgacgcactgtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCg > 1:471767‑M2/50‑148 (MQ=255) gtggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGaaa > 2:471787‑M2/22‑148 (MQ=255) tggacgccgagctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAag > 2:471768‑M2/21‑148 (MQ=255) agctaataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGa > 1:471783‑M2/12‑148 (MQ=255) aataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAc > 2:471782‑M2/8‑148 (MQ=255) ataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGCGCATCCGAAAAcc > 2:471813‑M2/7‑148 (MQ=255) ataatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAAcc > 1:471801‑M2/7‑148 (MQ=255) aatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGa > 2:471802‑M2/5‑148 (MQ=255) aatcTGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGa > 2:471803‑M2/5‑148 (MQ=255) | CGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAAACCGA > U00096/1618361‑1618649 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |