| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 1097204 = | 329 (1.060) | 8 (0.030) | 8/290 | 18.0 | 2.5% | coding (320/909 nt) | galU | glucose‑1‑phosphate uridylyltransferase |
| ? | AP012306 | 1097223 = | 310 (1.030) | coding (339/909 nt) | galU | glucose‑1‑phosphate uridylyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1097356‑1097204‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACGG > AP012306/1097223‑1097371 GGCGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGAC < 2:1647708/150‑1 GCGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACG < 1:1924599/150‑1 GCGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACG < 2:2656057/150‑1 GCGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACG > 2:1170685/1‑150 CGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGA > 1:3850349/1‑150 CGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGA > 2:1021905/1‑150 GGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAA > 2:2874720/1‑150 GGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAA > 2:263159/1‑150 TGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAAAGGCCTGGGACACGCGGTATTGT > 1:619101/1‑150 AGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAAAGGCCTGGGACACGCGGTATTGTGTACTCACCCGGAAGTGGGTGATGAAC < 2:1959532/150‑1 AATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGAAGTGGGTGATGAACCG < 2:619101/150‑1 ACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGTGTGTCCCAGGCCTTTCGCCAGACCCTGACGAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAG < 2:1243763/150‑1 CATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAACGGCCTGGGACACG > 1:2845643/1‑107 CATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAACGGCCTGGGACACG < 2:2845643/107‑1 ACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAAAGGCCTGGGACA < 2:1280452/85‑1 ACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAAAGGCCTGGGACA > 1:1280452/1‑85 CGAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAA < 2:786527/150‑1 GAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAAC < 2:2351957/150‑1 GAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAAC < 2:280229/150‑1 GAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAAC < 1:2799504/150‑1 AAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACG > 1:3658769/1‑150 AAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACG > 2:970476/1‑150 AAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACGG < 2:2650159/150‑1 AAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGAAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACGG > 1:503866/1‑150 GGCGGATCATCTCTGCCAGGTTATCCTGTGACAAATCGGATTCATATTCATCCAGAATAACATCAGGCAAAATAACAGCTACCGGTTCATCACCCACTACCGGGTGAGCACACAATACCGCGTGTCCCAGGCCTTTCGCCAGACCCTGACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP012306/1097356‑1097204‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACGG > AP012306/1097223‑1097371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |