mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| JC | 162,220 | +51 bp | intergenic (+131/+243) | mrcB → / ← hemL | fused glycosyl transferase and transpeptidase/glutamate‑1‑semialdehyde aminotransferase |
| RA | 1,407,587 | G→A | intergenic (‑84/‑103) | ydhL ← / → ydhM | conserved protein/predicted DNA‑binding transcriptional regulator |
| RA | 1,486,241 | G→A | intergenic (‑2088/‑492) | thrS ← / → yniD | threonyl‑tRNA synthetase/predicted protein |
| RA | 1,534,485 | T→A | I360F (ATC→TTC) | ydjE ← | predicted transporter |
| RA | 1,611,137 | G→T | E37D (GAG→GAT) | purT → | phosphoribosylglycinamide formyltransferase 2 |
| RA | 1,844,249 | Δ1 bp | coding (124/567 nt) | spr → | predicted peptidase, outer membrane lipoprotein |
| RA | 2,073,848 | Δ2 bp | intergenic (+106/+161) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator |
| RA | 2,073,851 | Δ1 bp | intergenic (+109/+159) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator |
| MC JC | 3,245,072 | Δ82 bp | intergenic (‑91/‑736) | pyrE ← / → yicC | orotate phosphoribosyltransferase/conserved protein |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AP012306 | 3373344–3374780 | 3375344–3374782 | 3–2001 | 136 [131] | [128] 132 | rrlC | 23S ribosomal RNA (rrlC) |