BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	AP012306	1,322,972	Δ2,926 bp		[yneK]–marC	[yneK], ydeA, marC

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AP012306	1322972	1325897	2926	397 [1]	[1] 396	[yneK]–marC	[yneK],ydeA,marC

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP012306	= 1322971	1 (0.000)	395 (1.170)	219/298	0.0	99.8%	coding (382/1116 nt)	yneK	predicted protein
*	?	AP012306	1325898 =	1 (0.000)	395 (1.170)	219/298	0.0	99.8%	intergenic (‑163/‑49)	marC/marR	predicted transporter/DNA‑binding transcriptional repressor

Only 100 of 397 total aligned reads displayed.

ACACGCTATACAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTGCGCTCCCAACCCAAAGCCTGTCACTATGGGGCGCGTATTTCAGACCGGCGTCGAGCGTGTACTCTTTCTGTTTCTGAATGATTTTATTGAACAATTTCCAATGATCAACCCTGGTGTTCCCATCAAAAGAGCGCATACACCACATATT  >  AP012306/1322822‑1323120

  acGCTATACAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcc                                                                                                                                                     <  2:4256899‑M1/150‑3 (MQ=255)

   cGCTATACAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcct                                                                                                                                                    <  2:1917548‑M1/150‑4 (MQ=255)

     gtatacAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgg                                                                                                                                                  <  2:3165036‑M1/149‑6 (MQ=255)

      tataCAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctggg                                                                                                                                                 <  1:652908‑M1/150‑7 (MQ=255)

         aCAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaa                                                                                                                                              <  1:5713‑M1/150‑10 (MQ=255)

          cAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaat                                                                                                                                             >  1:1808736‑M1/1‑140 (MQ=255)

           aaTGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaata                                                                                                                                            <  2:639833‑M1/150‑12 (MQ=255)

            aTGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatat                                                                                                                                           >  1:3281669‑M1/1‑138 (MQ=255)

             tGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatatt                                                                                                                                          >  1:2844290‑M1/1‑137 (MQ=255)

              gAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatatta                                                                                                                                         >  1:1554897‑M1/1‑136 (MQ=255)

              gAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatatta                                                                                                                                         >  1:1225287‑M1/1‑136 (MQ=255)

              gAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatatta                                                                                                                                         >  1:2131977‑M1/1‑136 (MQ=255)

               aaaaGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattat                                                                                                                                        <  1:863510‑M1/150‑16 (MQ=255)

                 aaGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcc                                                                                                                                      >  1:41417‑M1/1‑133 (MQ=255)

                    gTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccct                                                                                                                                   <  2:3777783‑M1/150‑21 (MQ=255)

                     ttCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctg                                                                                                                                  <  1:996882‑M1/150‑22 (MQ=255)

                       cAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgca                                                                                                                                >  2:3469514‑M1/1‑127 (MQ=255)

                        aGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaa                                                                                                                               >  1:4345587‑M1/1‑126 (MQ=255)

                        aGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaa                                                                                                                               >  2:265334‑M1/1‑126 (MQ=255)

                         gTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaac                                                                                                                              >  2:409156‑M1/1‑125 (MQ=255)

                          tttAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaact                                                                                                                             >  2:4415823‑M1/1‑124 (MQ=255)

                            tAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaa                                                                                                                           >  1:2427051‑M1/1‑122 (MQ=255)

                               aCTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaatta                                                                                                                        >  2:1349008‑M1/1‑119 (MQ=255)

                                  catttatcCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattactt                                                                                                                     <  2:679177‑M1/147‑35 (MQ=255)

                                  cACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattactt                                                                                                                     <  2:3394660‑M1/150‑35 (MQ=255)

                                   aCTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttg                                                                                                                    <  1:2064260‑M1/150‑36 (MQ=255)

                                       aTCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccag                                                                                                                >  2:1756262‑M1/1‑111 (MQ=255)

                                       aTCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccag                                                                                                                <  2:2438424‑M1/150‑40 (MQ=255)

                                            gCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaa                                                                                                           <  2:4284648‑M1/150‑45 (MQ=255)

                                             ccAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaac                                                                                                          >  2:3579541‑M1/1‑105 (MQ=255)

                                                    tGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtg                                                                                                   <  1:1724303‑M1/150‑53 (MQ=255)

                                                     ggAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtga                                                                                                  <  1:2206401‑M1/150‑54 (MQ=255)

                                                        aGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaa                                                                                               >  1:3905180‑M1/1‑94 (MQ=255)

                                                        aGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaa                                                                                               <  2:327504‑M1/150‑57 (MQ=255)

                                                         gACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaag                                                                                              <  1:4069720‑M1/150‑58 (MQ=255)

                                                           cacaAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagta                                                                                            <  2:3676942‑M1/150‑60 (MQ=255)

                                                             caAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtacc                                                                                          >  1:3566337‑M1/1‑89 (MQ=255)

                                                              aaaGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattccttgccagggcaactaatgtgaaaagtacca                                                                                         <  2:1796401‑M1/150‑63 (MQ=255)

                                                              aaaGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtacca                                                                                         >  1:1364915‑M1/1‑88 (MQ=255)

                                                               aaGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccag                                                                                        >  1:3054346‑M1/1‑87 (MQ=255)

                                                               aaGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccag                                                                                        <  1:2678311‑M1/150‑64 (MQ=255)

                                                               aaGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccag                                                                                        <  1:4176728‑M1/150‑64 (MQ=255)

                                                                aGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagc                                                                                       <  1:2285029‑M1/150‑65 (MQ=255)

                                                                   aaaTATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgat                                                                                    <  2:2854943‑M1/150‑68 (MQ=255)

                                                                    aaTATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatc                                                                                   <  1:3793158‑M1/150‑69 (MQ=255)

                                                                     atatTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatct                                                                                  >  2:2116383‑M1/1‑81 (MQ=255)

                                                                      tatTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctg                                                                                 <  2:1174682‑M1/150‑71 (MQ=255)

                                                                       atTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgt                                                                                <  2:2919617‑M1/150‑72 (MQ=255)

                                                                       atTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgt                                                                                >  1:786532‑M1/1‑79 (MQ=255)

                                                                          gAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttca                                                                             >  1:3967216‑M1/1‑76 (MQ=255)

                                                                          gAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttca                                                                             >  1:3097932‑M1/1‑76 (MQ=255)

                                                                            aTTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaat                                                                           >  1:1138693‑M1/1‑74 (MQ=255)

                                                                            aTTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaat                                                                           <  2:1207612‑M1/150‑77 (MQ=255)

                                                                               tCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaa                                                                        >  1:1483395‑M1/1‑71 (MQ=255)

                                                                               tCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaa                                                                        >  2:745176‑M1/1‑71 (MQ=255)

                                                                                cAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaa                                                                       >  2:417093‑M1/1‑70 (MQ=255)

                                                                                 aGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaat                                                                      <  1:4488997‑M1/150‑82 (MQ=255)

                                                                                 aGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaat                                                                      >  1:33324‑M1/1‑69 (MQ=255)

                                                                                  ggTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaatt                                                                     >  2:1472456‑M1/1‑68 (MQ=255)

                                                                                  ggTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaatt                                                                     <  1:1092889‑M1/150‑83 (MQ=255)

                                                                                  ggTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaatt                                                                     >  1:335816‑M1/1‑68 (MQ=255)

                                                                                    tagtaATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattat                                                                   >  1:609417‑M1/1‑66 (MQ=255)

                                                                                    tagtaATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattat                                                                   >  1:457573‑M1/1‑66 (MQ=255)

                                                                                     agtaATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattatt                                                                  <  2:4510314‑M1/150‑86 (MQ=255)

                                                                                     agtaATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattatt                                                                  <  2:2997206‑M1/150‑86 (MQ=255)

                                                                                         ataaATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccat                                                              <  1:2750543‑M1/150‑90 (MQ=255)

                                                                                           aaaTTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattg                                                            >  2:1675033‑M1/1‑59 (MQ=255)

                                                                                             aTTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattggg                                                          >  1:3852705‑M1/1‑57 (MQ=255)

                                                                                               ttAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtc                                                        >  2:574935‑M1/1‑55 (MQ=255)

                                                                                                        atttatttAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagctatctgttcaatgaaattattccattgggtcgcttaatcc                                               <  2:2578613‑M1/150‑105 (MQ=255)

                                                                                                        atttatttAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcc                                               <  1:4288928‑M1/150‑105 (MQ=255)

                                                                                                        atttatttAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcc                                               >  1:1922646‑M1/1‑46 (MQ=255)

                                                                                                         tttatttaGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatcca                                              <  1:3618399‑M1/150‑106 (MQ=255)

                                                                                                          ttatttaGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccat                                             <  1:3443324‑M1/150‑107 (MQ=255)

                                                                                                            atttaGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatat                                           <  1:4019958‑M1/150‑109 (MQ=255)

                                                                                                              ttaGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatgg                                         >  1:2525054‑M1/1‑40 (MQ=255)

                                                                                                               taGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggt                                        >  2:3360237‑M1/1‑39 (MQ=255)

                                                                                                                aGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggtt                                       >  1:128003‑M1/1‑38 (MQ=255)

                                                                                                                  aTAATTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaa                                     >  1:160022‑M1/1‑36 (MQ=255)

                                                                                                                    aaTTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatc                                   >  1:3815351‑M1/1‑34 (MQ=255)

                                                                                                                     aTTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatca                                  >  2:2042597‑M1/1‑33 (MQ=255)

                                                                                                                     aTTTTCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatca                                  >  2:4003122‑M1/1‑33 (MQ=255)

                                                                                                                      ttttCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcag                                 >  2:437978‑M1/1‑32 (MQ=255)

                                                                                                                       tttCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcaga                                >  1:547234‑M1/1‑31 (MQ=255)

                                                                                                                       tttCGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcaga                                >  1:3193368‑M1/1‑31 (MQ=255)

                                                                                                                          cGCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaaga                             >  1:2875337‑M1/1‑28 (MQ=255)

                                                                                                                           gCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaa                            <  1:1004084‑M1/150‑124 (MQ=255)

                                                                                                                           gCCATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaa                            >  1:1445735‑M1/1‑27 (MQ=255)

                                                                                                                             cATGATGGAGAAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaag                          <  1:3415194‑M1/150‑126 (MQ=255)

                                                                                                                                    gagaAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcct                   >  1:3312284‑M1/1‑18 (MQ=255)

                                                                                                                                     agaAATTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctg                  <  2:4444125‑M1/150‑134 (MQ=255)

                                                                                                                                       aaaTTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgct                >  2:2335477‑M1/1‑15 (MQ=255)

                                                                                                                                        aaTTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgctt               <  2:476086‑M1/150‑137 (MQ=255)

                                                                                                                                         aTTAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgctta              <  1:1949389‑M1/150‑138 (MQ=255)

                                                                                                                                           tAATATTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaac            <  1:3660725‑M1/150‑140 (MQ=255)

                                                                                                                                               atTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagt        <  2:3838059‑M1/150‑144 (MQ=255)

                                                                                                                                               atTTTTTcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagt        <  2:869604‑M1/150‑144 (MQ=255)

                                                                                                                                                ttttttcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagta       <  1:3752634‑M1/150‑145 (MQ=255)

                                                                                                                                                     tcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgt  >  2:2248712‑M1/1‑1 (MQ=255)

                                                                                                                                                     tcctgggcaatattatcccctgcaactaattacttgccagggcaactaatgtgaaaagtaccagcgatctgttcaatgaaattattccattgggtcgcttaatccatatggttaatcagaagaaagatcgcctgcttaacgagtatctgt  >  2:89538‑M1/1‑1 (MQ=255)

ACACGCTATACAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTGCGCTCCCAACCCAAAGCCTGTCACTATGGGGCGCGTATTTCAGACCGGCGTCGAGCGTGTACTCTTTCTGTTTCTGAATGATTTTATTGAACAATTTCCAATGATCAACCCTGGTGTTCCCATCAAAAGAGCGCATACACCACATATT  >  AP012306/1322822‑1323120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`