| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 1142669 = | 111 (0.590) | 3 (0.020) | 3/134 | 14.1 | 1.8% | coding (259/1536 nt) | murJ | murein biosynthesis integral membrane protein MurJ |
| ? | NC_012967 | = 4310192 | 222 (1.250) | coding (977/1503 nt) | proP | glycine betaine/L‑proline transporter ProP | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 112 total aligned reads displayed.
CATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGTGATC > NC_012967/1142598‑1142740 | cATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATg > 1:4915341/1‑72 (MQ=255) aTTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGt > 1:305331/1‑72 (MQ=255) tttGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGGCGCCACGCGGGTCTTTGTCTCTTATGtt < 1:6634744/72‑1 (MQ=255) tttGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATNtt > 2:544951/1‑72 (MQ=255) tttGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGtt > 1:6399131/1‑72 (MQ=255) tGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTc > 2:3288753/1‑72 (MQ=255) tACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTg > 2:3254388/1‑72 (MQ=255) aCCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTgg > 2:181615/1‑72 (MQ=255) cGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTNTGGcc > 2:591049/1‑72 (MQ=255) gtttCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCct < 2:2911050/70‑1 (MQ=255) aTTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCctg > 1:6540784/1‑72 (MQ=255) aTTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCctg > 2:3453142/1‑72 (MQ=255) aTTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCctg > 2:2372833/1‑72 (MQ=255) tGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGa > 2:5144212/1‑72 (MQ=255) gCGAAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGaca < 1:4458431/72‑1 (MQ=255) cGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCCGacac > 1:68444/1‑72 (MQ=255) cGGAATATAAAAGTAACCAGGGTGAAGACGCCACGCGGGACTTTGTCTCTTATGTTTCTTGTCTGCTGacac > 2:2722748/1‑72 (MQ=255) ggAATNTAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACt < 2:294446/72‑1 (MQ=255) ggAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACt > 2:5277924/1‑72 (MQ=255) gAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACtt < 2:5605221/72‑1 (MQ=255) gAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACtt > 2:5483304/1‑72 (MQ=255) gAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACtt > 2:6137627/1‑72 (MQ=255) aaaTAAAAGAGTAGGGAGGGAGAACACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACtt < 2:136965/71‑1 (MQ=255) aaTATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTg < 2:6575824/72‑1 (MQ=255) aaTATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTACTGGCCTGCTGACACTTg > 1:2194482/1‑72 (MQ=255) tataAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTgcg < 1:3144180/72‑1 (MQ=255) ataAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTgcgc > 2:3204979/1‑72 (MQ=255) ataAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTgcgc > 2:5453034/1‑72 (MQ=255) aaaaaaGGAGGCGGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTgcgc < 2:1958683/70‑1 (MQ=255) taAAAGTAGGCGGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCt < 1:4815081/72‑1 (MQ=255) taAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCt > 1:2619864/1‑72 (MQ=255) aaaaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTCGTCTCTTATGTTTGCGGCCTGCTGACACTTGCGCTg > 2:1963183/1‑72 (MQ=255) aaaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTgg > 1:5227919/1‑72 (MQ=255) aaaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTgg < 2:6379493/72‑1 (MQ=255) aaaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTgg > 1:6228924/1‑72 (MQ=255) aaaGTAAGCAGGGCGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTgg > 2:6537623/1‑72 (MQ=255) aaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGc > 2:1460023/1‑72 (MQ=255) aaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGc > 1:5186241/1‑72 (MQ=255) aaGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGc > 2:3641836/1‑72 (MQ=255) aGTAAGCGGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCg < 1:107168/72‑1 (MQ=255) gTAAGCAGGGTGAGGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCgg < 2:3742183/72‑1 (MQ=255) tAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCggg > 1:5007043/1‑71 (MQ=255) tAAGCAGGGTGAAGACGCCACGCGGGTCTTTATCTCTTGTGTTTCTGGCCTGCTGACACTTGCGCTGGCggc > 1:362926/1‑71 (MQ=255) aGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCGGGGTGTtg > 1:6567519/1‑72 (MQ=255) gCAGGGTGAAGACGCCGCGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgt < 2:4897243/72‑1 (MQ=255) gCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgt > 1:6591661/1‑72 (MQ=255) gCAGGGTCAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgt > 2:5358637/1‑72 (MQ=255) cggggTGACGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgtg < 2:4813090/70‑1 (MQ=255) cAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgtg > 2:4515346/1‑72 (MQ=255) aGGTTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGa < 2:6424277/72‑1 (MQ=255) aGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgtgt > 2:2089744/1‑71 (MQ=255) aGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTtgggg > 2:3421804/1‑69 (MQ=255) aGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGa < 1:1622514/72‑1 (MQ=255) aGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGGtgtgt > 1:3308207/1‑71 (MQ=255) gggTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGTGGGtgtgtc > 2:5919003/1‑70 (MQ=255) gggTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGAc > 2:6209722/1‑72 (MQ=255) ggTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACg < 1:6456995/72‑1 (MQ=255) ggTGAACACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACg < 1:3906858/72‑1 (MQ=255) cgTGAGGACGGCACGGGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACg < 2:3903165/71‑1 (MQ=255) tGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACggg > 1:2055454/1‑71 (MQ=255) gAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTCGTGGCggct > 2:5479185/1‑70 (MQ=255) aaGACGCCACGCGGGTCTTTGTCTCTTATGTGTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCg < 1:211167/72‑1 (MQ=255) aGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGc < 1:5360104/72‑1 (MQ=255) gACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCt < 1:3561583/72‑1 (MQ=255) gACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCt < 2:1532553/72‑1 (MQ=255) gACGCCACGCGGGTCTTTGTCTCTTATGTCTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCt < 2:4078318/72‑1 (MQ=255) aCGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGGGACGGGCGCTg > 2:6478393/1‑72 (MQ=255) cGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTTTGACGGTCGCCgg > 1:2470929/1‑72 (MQ=255) cGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTgg > 1:1585826/1‑72 (MQ=255) gCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGAGACTTGCGCTGGCGGTTGTGACGGTCGCTggg > 2:4973566/1‑71 (MQ=255) gCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGc < 1:2796629/72‑1 (MQ=255) gCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGc < 1:2079363/72‑1 (MQ=255) ccACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTTTGATGGGCGCggggg > 2:1917284/1‑70 (MQ=255) tgggTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTc < 1:3748644/71‑1 (MQ=255) ggggTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTc < 1:3963025/71‑1 (MQ=255) cgtgTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTc < 2:2032767/69‑1 (MQ=255) cgGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTc < 2:204908/72‑1 (MQ=255) gggTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTcg < 1:2694328/72‑1 (MQ=255) ggTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGTTcgc > 1:6186796/1‑72 (MQ=255) ggTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGGTcgc > 1:3597790/1‑72 (MQ=255) ggTCTTTGTCTCTTATGTTTCGGGCCTGCTGACACTTGCGCTGGGGGTTGTGACGGTCGCT‑GCATGCTcgcc < 2:5456723/72‑1 (MQ=255) gTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTcgcc < 1:3902756/72‑1 (MQ=255) gTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTcgcc < 2:3536721/72‑1 (MQ=255) gTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTcgcc < 1:3030298/72‑1 (MQ=255) cTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTcgccgc < 2:2563051/72‑1 (MQ=255) ttGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCAc < 1:3859016/72‑1 (MQ=255) tGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTTACGGGCGCCGGCATTCTCGCCCCAcc > 2:3354638/1‑72 (MQ=255) tGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGTCGGGCCGTCGCCTGCTCGCCNNNcn > 2:4713536/1‑71 (MQ=255) tGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCAcc < 1:969630/72‑1 (MQ=255) gTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCCTGCTCGCCGCAccc > 1:111890/1‑71 (MQ=255) gTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCNGGNATGCTCGCCGCACCg > 2:4731247/1‑72 (MQ=255) ctctTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTg > 2:5244494/1‑72 (MQ=255) ctctTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTg < 1:6673782/72‑1 (MQ=255) ctctTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTg < 2:6651647/72‑1 (MQ=255) tctTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGAAGGGCGGCGGGATGCTCCCCCCCCCCTgg > 1:5632409/1‑72 (MQ=255) ctTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTggg < 2:4174930/72‑1 (MQ=255) ttATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGt < 1:987265/72‑1 (MQ=255) ttATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGt < 1:1225406/72‑1 (MQ=255) aTGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGTGa < 1:4743012/72‑1 (MQ=255) gTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGTGATc < 1:804036/72‑1 (MQ=255) | CATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGTGATC > NC_012967/1142598‑1142740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |