New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012967 = 3894996NA (NA)177 (0.940) 104/142 0.1 98.3% intergenic (+26/‑162) ECB_RS25215/rbsD IS3‑like element IS150 family transposase/D‑ribose pyranase
?NC_012967 3902865 = 3 (0.020)coding (270/693 nt) yieP FadR/GntR family transcriptional regulator

TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTGTTTTCA  >  NC_012967/3894928‑3895035
                                                                    |                                       
tCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc                                      <  1:901014/72‑1 (MQ=34)
                                    tgtTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTGTTTTCa  >  1:3283567/1‑72 (MQ=255)
                                                                    |                                       
TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGACGCCTCCTTTCTTCATAAGGGGGCGTTTTTGTTTTCA  >  NC_012967/3894928‑3895035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.