| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 1882606 = | 30 (0.100) | 329 (1.150) | 126/142 | 0.0 | 91.6% | coding (133/852 nt) | manZ | PTS mannose transporter subunit IID |
| ? | NC_012967 | = 1882610 | NA (NA) | coding (137/852 nt) | manZ | PTS mannose transporter subunit IID | |||||
Only 100 of 329 total aligned reads displayed.
TGACGGCGAATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/1882676‑1882606‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAACGCAG < NC_012967/1882610‑1882540 TGACGGCGAATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAA > 1:1304260/1‑72 GACGGCGAATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAAT > 2:9411292/1‑72 ACGGCGAATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATA < 1:9331721/72‑1 ACGGCGAACAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATA > 2:3729317/1‑72 CGAATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGn > 1:1145441/1‑71 AATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAG > 2:9361234/1‑72 ATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATCGAATAGAGAAGC > 1:423240/1‑72 ATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGC > 1:8121239/1‑72 GCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGA < 2:630469/72‑1 GCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGA > 1:9711232/1‑72 GCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGA < 1:5927816/72‑1 TGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAAC < 2:7991386/72‑1 GTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACC > 2:8799191/1‑72 GTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACC < 2:2024786/72‑1 GTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACC > 2:1355515/1‑72 TTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCC > 2:7782087/1‑72 TTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCC > 2:4970672/1‑72 TTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCC > 2:1617380/1‑72 TTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCA < 1:8881867/72‑1 TACGAGCTTCGTTGTTCTCAGGGTAGNGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAG < 2:1057889/72‑1 TACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACCAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAG < 2:2403020/72‑1 TACGAGCTTCGTTGTTCTCAGGGTAGAGGACACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAG > 1:516345/1‑72 ACGAGCTTCGTTGTTCTCAGGGTAGAGGCGANGAATTGNCGGTACCATAGAATAGAGAAGCAGAAACCCAGT > 1:565797/1‑72 ACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGT < 1:5524605/72‑1 ACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGT < 2:2248539/72‑1 CGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTG < 1:7633065/72‑1 AGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCg > 2:7194625/1‑71 AGCTGCGTTGTTCTCAGGTTAGAGCCAACAAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCC < 1:3475280/72‑1 GCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCT > 1:3053181/1‑72 GCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCT < 2:6610387/72‑1 CTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCcg > 1:1006734/1‑70 CTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTG < 2:1137862/72‑1 TTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCNGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGC > 1:530618/1‑72 TTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGC > 1:4056465/1‑72 TCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCA > 2:9574057/1‑72 TCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCA > 1:8249736/1‑72 CGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCAT < 2:5475880/72‑1 CGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCAT > 1:6484926/1‑72 GTTGTTCTCAGGGTAGAGGCGACGAATTGNCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATA > 2:826068/1‑72 GTTGTTCGCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATA < 1:1967740/72‑1 TTGTTCTCAGGGTAGAGGCGACGAATTNCCGGTACCATAGANTAGAGAAGCAGAAACCCAGTGCCTGCATAC > 1:498092/1‑72 TGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACG > 1:4896329/1‑72 TGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACG < 1:2572511/72‑1 TCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTC > 2:1469111/1‑72 CTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCG < 1:8928731/72‑1 CTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCG > 1:7279907/1‑72 TCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGA < 1:398636/72‑1 TCAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGA > 1:4514838/1‑72 CAGGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAA > 2:8531092/1‑72 AGGGTAGAGGCGACGAATTGGCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAG < 1:7818220/72‑1 GGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGCAGT > 2:2652193/1‑72 GGGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGT > 2:7758816/1‑72 GGTAGAGGCGACTAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTT > 1:9319729/1‑72 GGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTT > 1:5409033/1‑72 GGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTT < 2:5835864/72‑1 GGTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTT < 1:7124767/72‑1 GTAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTC > 2:4685991/1‑72 TAGAGGCGACGAATTGCCGGTACCATAGAATAGAGAACCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCC < 1:9033471/72‑1 AGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCA > 2:4875219/1‑72 AGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCA < 1:638989/72‑1 AGAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCA < 1:793380/72‑1 GAGGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCAT < 1:6786472/72‑1 GGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGA > 2:8983556/1‑72 GGCGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTNCGAAGTTCCATGA < 1:3160301/72‑1 CGACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAAC < 2:9877619/72‑1 GACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACC > 1:7234282/1‑72 GACGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACC < 2:5246947/72‑1 CGAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCT < 2:9139618/72‑1 GAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTG < 2:9247588/72‑1 GAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTG < 2:3310034/72‑1 GAATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTG > 2:8074751/1‑72 AATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGG > 2:5757217/1‑72 ATTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGA < 1:8654307/72‑1 ATTGCCGGTAACATAGAATAGAGAAGGAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACACTGGA > 2:9702399/1‑72 TTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAA > 1:1454020/1‑72 TTGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAA < 1:2856290/72‑1 TGCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAG < 1:9897117/72‑1 GCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGA > 2:4263284/1‑72 GCCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGA > 1:2517137/1‑72 CCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAG > 2:5186406/1‑72 CCGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAG < 2:142071/72‑1 CGGTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGG > 2:6905519/1‑72 GTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATGCGTTCGAAGTTCCATGAACCCTGGAAGAGGTT < 1:218822/72‑1 GTACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTT > 1:2161123/1‑72 TACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTA > 2:3609236/1‑72 TACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTA > 1:9213122/1‑72 TACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTA > 2:3134921/1‑72 TACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTA < 1:803169/72‑1 ACCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAG > 2:6134365/1‑72 CCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGNACCCTGGAAGAGGTTAGA > 1:3770387/1‑72 CCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGA > 2:6731685/1‑72 CCATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGA < 2:7856465/72‑1 CATAGAATAGAGAAGCAGAAGCCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAA < 2:6546498/72‑1 CATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAc > 2:3458864/1‑71 CATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAA > 1:5727596/1‑72 ATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAAC > 2:4542084/1‑72 ATAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAAC < 2:3946196/72‑1 TAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAACG > 2:7555797/1‑72 TAGAATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAACG < 1:5484380/72‑1 AATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAACGCAG > 1:6186417/1‑72 TGACGGCGAATAGCTTGTTTACGAGCTTCGTTGTTCTCAGGGTAGAGGCGACGAATTGCCGGTACCATAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/1882676‑1882606‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAGAAGCAGAAACCCAGTGCCTGCATACGTTCGAAGTTCCATGAACCCTGGAAGAGGTTAGAACGCAG < NC_012967/1882610‑1882540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |