| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 880528 = | 156 (0.540) | 39 (0.170) | 29/114 | 8.2 | 21.4% | intergenic (+17/+163) | rcdA/ECB_RS04335 | DNA‑binding transcriptional regulator RcdA/hypothetical protein |
| ? | NC_012967 | = 904682 | 161 (0.700) | intergenic (+77/+159) | ECB_RS04500/ybjL | ogr/Delta‑like zinc finger family protein/aspartate:alanine antiporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 159 total aligned reads displayed.
TAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAGTTGGGTTGG > NC_012967/880457‑880599 | aaGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATaa > 2:9579099/1‑72 (MQ=255) aaGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATaa > 2:761549/1‑72 (MQ=255) aGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAAc < 1:8864712/72‑1 (MQ=255) gCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACa < 2:3458571/72‑1 (MQ=255) gCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACa < 1:3200769/72‑1 (MQ=255) ccGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaa > 1:8225117/1‑72 (MQ=255) ccGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaa < 1:2515087/72‑1 (MQ=255) cGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaa > 1:1686257/1‑72 (MQ=255) gCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaa > 2:8653491/1‑72 (MQ=255) gCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaa > 2:3803247/1‑72 (MQ=255) gCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaa > 1:2787507/1‑72 (MQ=255) cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaaa < 1:3471860/72‑1 (MQ=255) cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaaa > 1:9501843/1‑72 (MQ=255) cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaaa < 2:8596227/72‑1 (MQ=255) cTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGAAGGGTAGTAGATAAGTCTTGGATAACacaaa > 2:3804955/1‑72 (MQ=255) tATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACaaaaaa < 1:7757104/72‑1 (MQ=255) tCGCGCGAGGAGATTTTGAGGATGGTTGANAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAAcc > 2:483574/1‑72 (MQ=255) tCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAAcc > 2:5512364/1‑72 (MQ=255) tCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAAcc < 2:7940807/72‑1 (MQ=255) tCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAAcc < 1:5055729/72‑1 (MQ=255) tCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAAcc < 1:4244464/72‑1 (MQ=255) gcgcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCa < 2:1979101/72‑1 (MQ=255) gcgcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCa < 1:2099376/72‑1 (MQ=255) gcgcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCa > 2:3797073/1‑72 (MQ=255) gcgcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCa < 2:6139856/72‑1 (MQ=255) cgcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCAt > 1:4033405/1‑72 (MQ=255) gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCAtt < 2:7559920/72‑1 (MQ=255) gcgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACACAtt < 1:8430463/72‑1 (MQ=255) cgAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCAttt > 1:6779492/1‑72 (MQ=255) gaggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTa < 2:3657562/72‑1 (MQ=255) gaggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTa > 2:1753749/1‑72 (MQ=255) gaggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTa < 1:5220741/72‑1 (MQ=255) aggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTAt > 1:9822431/1‑72 (MQ=255) aggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTAt > 1:5656095/1‑72 (MQ=255) ggagATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATg < 2:8566663/72‑1 (MQ=255) gagaTTTTGATGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGt < 2:8503364/72‑1 (MQ=255) gagaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGt < 2:1305386/72‑1 (MQ=255) gagaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGt < 1:9088387/72‑1 (MQ=255) agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTa < 2:4933566/72‑1 (MQ=255) agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTa < 1:1943823/72‑1 (MQ=255) agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTa < 1:8374628/72‑1 (MQ=255) agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTa < 2:2406381/72‑1 (MQ=255) agaTTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTa > 1:9352932/1‑72 (MQ=255) tttGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACg < 1:7156886/72‑1 (MQ=255) ttGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACgg < 1:2789639/72‑1 (MQ=255) ttGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACgg < 2:4320045/72‑1 (MQ=255) tGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACggg < 2:6674285/72‑1 (MQ=255) tGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACggg < 1:2713223/72‑1 (MQ=255) tGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACggg < 1:4465641/72‑1 (MQ=255) aGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGtt < 1:2556440/72‑1 (MQ=255) aGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGtt < 1:7496034/72‑1 (MQ=255) aGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGtt > 2:4643207/1‑72 (MQ=255) ggATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTa < 2:8820358/72‑1 (MQ=255) ggATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTa > 2:7081409/1‑72 (MQ=255) ggATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTa < 2:9146397/72‑1 (MQ=255) ggATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTa < 2:2595004/72‑1 (MQ=255) ggATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTa < 1:5982748/72‑1 (MQ=255) gATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTaa < 1:7944171/72‑1 (MQ=255) aTGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAAt < 2:7514790/72‑1 (MQ=255) aTGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAAt < 2:4741248/72‑1 (MQ=255) tGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATg < 2:5943346/72‑1 (MQ=255) ggTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGa < 1:8867665/72‑1 (MQ=255) ggTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGa > 2:7728167/1‑72 (MQ=255) gTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGaa > 2:3045034/1‑72 (MQ=255) tGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGaaaa < 2:469258/72‑1 (MQ=255) tGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGaaaa > 2:7656162/1‑72 (MQ=255) agagGGTTGCCGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACa > 1:1794828/1‑72 (MQ=255) agagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACa > 2:9545309/1‑72 (MQ=255) gagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACaa > 1:126905/1‑72 (MQ=255) gagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACaa < 2:6072782/72‑1 (MQ=255) gagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACaa < 2:2922723/72‑1 (MQ=255) gagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACaa > 1:6511641/1‑72 (MQ=255) gagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACaa > 2:7104153/1‑72 (MQ=255) gagGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACaa > 2:1419222/1‑72 (MQ=255) agGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAAt > 2:3146430/1‑72 (MQ=255) agGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAAt < 1:4598325/72‑1 (MQ=255) agGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAAt > 2:7493511/1‑72 (MQ=255) gggTTGCAGGGTAGTAGANAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATa < 1:3792337/72‑1 (MQ=255) ggTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATaa > 1:115047/1‑72 (MQ=255) ggTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATaa > 1:3281630/1‑72 (MQ=255) ggTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATaa > 1:1016923/1‑72 (MQ=255) gTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAg > 1:8538534/1‑72 (MQ=255) gTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAAAAATAAg < 1:705516/72‑1 (MQ=255) tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGtt > 2:5809629/1‑72 (MQ=255) tGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGtt < 1:9415565/72‑1 (MQ=255) gCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTta > 1:1489206/1‑72 (MQ=255) aGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCCTTTATGTAAACGGGTTAATGAAAACAATAAGTtata > 2:6354725/1‑72 (MQ=255) ggTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTCAATGAAAACAATAAGTTATAGt < 1:4932132/72‑1 (MQ=255) tAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAAt < 1:5558746/72‑1 (MQ=255) tAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAAt < 2:3145863/72‑1 (MQ=255) aaGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATa < 1:5096243/72‑1 (MQ=255) gTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAg > 1:4412191/1‑72 (MQ=255) tttAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgtt < 2:6962109/72‑1 (MQ=255) tAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgttgg < 2:9493730/72‑1 (MQ=255) aGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgttggg > 1:387171/1‑72 (MQ=255) aTAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgttgggtt > 1:172031/1‑72 (MQ=255) aTAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgttgggtt > 2:1767479/1‑72 (MQ=255) tAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgttgggttg > 2:5465650/1‑72 (MQ=255) aaCAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgttgggttcg > 1:6567316/1‑70 (MQ=255) aaCAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAgtcgggttgg > 1:9525410/1‑72 (MQ=255) | TAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAGTAGATAAGTTTTAGATAACAAAAAACCCATTTATGTAAACGGGTTAATGAAAACAATAAGTTATAGTAAAAACAATAAGTTGGGTTGG > NC_012967/880457‑880599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |