| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 469901 = | 176 (0.700) | 11 (0.060) | 7/104 | 12.2 | 9.0% | intergenic (+15/‑221) | adk/hemH | adenylate kinase/ferrochelatase |
| ? | NC_012967 | = 4210195 | 93 (0.500) | intergenic (+38/+95) | rluF/yjbD | 23S rRNA pseudouridine(2604) synthase RluF/DUF3811 domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCCGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGGACTGTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/469988‑469901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgaggggactgtccgGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGGT < NC_012967/4210195‑4210125 TCCGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGG < 2:7319060/72‑1TCCGCCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGG < 2:4217359/72‑1 CCGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGG < 1:3886230/72‑1 CCGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGG < 2:1456750/72‑1 CCGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGG < 2:6582845/72‑1 ccGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGC < 2:3637434/70‑1 CGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGC < 2:2329164/72‑1 CGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGC < 2:3317192/72‑1 CGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGC < 2:4307206/72‑1 CGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGC < 2:8310255/72‑1 GGCCGGAGATGGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCG < 2:3044747/72‑1 CCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAG < 2:7671248/72‑1 CCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAG < 1:5364001/72‑1 TGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGG < 1:6966619/72‑1 GAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGG < 2:7072334/72‑1 tTTGCTGATAAGTTTGCTTGTGCGGGCCTGTCCCCCTCACCCTACCCCTCCCCCC‑GGGGGGGCGAGGGGACT < 1:5371545/71‑1 ATTGCTGATAAGTTTGCTTGTGCGGGCCTGTCCCCCCCCCCCTAACCCTCCCCCC‑GAGGGGGCGAGGGGACT < 1:561720/72‑1 TTGCTGATAAGTTTGCTTGTGCGGTCCTGTTCCCCTCACCCTACCCCTCTCCCC‑GAGGGGGCGAGGGGACTG < 2:8741884/72‑1 TTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGGACTG < 2:6898301/72‑1 TTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGGACTG < 1:553035/72‑1 GCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGGACTGTC < 2:7042040/72‑1 CTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGGACTGTCC < 1:3827466/72‑1 TGATAATTTTGCTTGTGCGGGCCTGCTCCCCTCCCCCTACCCCCCTCCCC‑GAGGGGGCGAGGGGACTGTCCG < 1:7625062/72‑1 TGATAAGTTTGCTTGTGCGGGCCTGTCCCCCTCACCCTACCCCTCCCCNC‑GAGGGGGCGAGGGGACTGTCCG < 1:5927480/72‑1 tcCCCCTCCCCCTAACCCTTTCCCC‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAG < 1:6741012/70‑1 cgcCCCTTTCCCCGGAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTT < 2:8283048/69‑1 cCCCTTTCCCG‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAAT < 1:6210586/71‑1 ttcCCCG‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGC < 1:7616172/69‑1 tcCCCC‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCG < 2:5590762/70‑1 cCCCG‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGC < 2:2184151/71‑1 CCCC‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCC < 2:1740164/72‑1 CCCC‑GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCC < 1:2764547/72‑1 GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTT < 2:1963437/72‑1 GAGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTT < 2:4740574/72‑1 gGGGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTC < 1:5385234/71‑1 GGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTT < 1:6854054/72‑1 GGGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGGTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTT < 1:1498156/72‑1 GGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTT > 1:8470958/1‑72 GGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTT < 1:216985/72‑1 GGGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTT < 1:2678113/72‑1 GGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTT > 2:8582060/1‑72 GGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTT < 2:6700867/72‑1 GGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTT < 1:4427887/72‑1 GGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTT < 2:7462697/72‑1 GGCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCCTCTTTT > 1:5167667/1‑72 GCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTT > 2:2127718/1‑72 GCGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTGCTTTTT < 1:3323351/72‑1 CGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTA < 2:5693930/72‑1 CGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTA > 2:5318786/1‑72 CGAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTA < 1:2971823/72‑1 CGAGGGGACTGTCCGGGCACATTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTc > 1:3804811/1‑71 GAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCATGCTGAGGCGTTAATCAGCGCCCCTTCTTTTTAC < 2:3035577/72‑1 GAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTAC < 1:5872188/72‑1 GAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTAC < 2:5057246/72‑1 GAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTAC > 2:132940/1‑72 GAGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTAC > 2:8245901/1‑72 AGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACG > 2:1793205/1‑72 AGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACG < 1:6595484/72‑1 AGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACG > 2:8586861/1‑72 AGGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACG < 2:4704519/72‑1 AGGGGACTGTCCGGGCACTTTTGGGCCGTTCTCATCAGTCTGAGGCGTTAATCAGCGCCCCCTCCTTTTACG > 1:929092/1‑72 GGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGC > 2:2300149/1‑72 GGGGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGC > 1:592525/1‑72 GGGACNGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCC < 2:812841/72‑1 GGACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCC < 1:6492844/72‑1 GACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCC < 2:713106/72‑1 GACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCC < 1:3416432/72‑1 GACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCC > 1:7495208/1‑72 gCTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCG < 2:3397263/71‑1 ACTGTCCGGGCANTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCG < 1:984316/72‑1 ACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGTCCCTTCTTTTTACGCCCCG > 1:2467397/1‑72 ACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCG < 2:79980/72‑1 ACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCG < 1:3885741/72‑1 ACTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCG < 1:7466821/72‑1 CTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGG > 1:3627078/1‑72 CTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGG > 2:7405874/1‑72 CTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGG < 1:6053585/72‑1 CTGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGG > 1:8809061/1‑72 TGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGC < 1:4543559/72‑1 TGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGC < 1:5198954/72‑1 TGTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGC < 2:7062815/72‑1 GTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGgg > 2:6401818/1‑70 GTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCG < 2:2615705/72‑1 GTCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCG > 1:7676376/1‑72 TCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGc > 2:7443233/1‑71 TCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGA < 2:2078181/72‑1 TCCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGA < 1:2754148/72‑1 CCGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGcg > 1:7547491/1‑70 CGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGG > 1:2324110/1‑72 CGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGG < 1:2756494/72‑1 CGGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGG > 2:4956765/1‑72 GGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGGT < 1:2602031/72‑1 GGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGGT < 2:4668625/72‑1 GGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCCAGGg > 1:7505927/1‑71 TCCGGCCTGAGATTGCTGATAAGTTTGCTTGTGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCC‑GAGGGGGCGAGGGGACTGTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/469988‑469901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgaggggactgtccgGGCACTTTTGGGCCGTTTTCATCAGTCTGAGGCGTTAATCAGCGCCCCTTCTTTTTACGCCCCGGCGAGGT < NC_012967/4210195‑4210125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |