| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 509243 = | 243 (0.960) | 3 (0.010) | 3/134 | 16.1 | 1.3% | coding (492/879 nt) | glxR | 2‑hydroxy‑3‑oxopropionate reductase |
| ? | NC_012967 | = 4204196 | 237 (0.990) | coding (1438/3684 nt) | metH | methionine synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/509317‑509243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaCTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGATA < NC_012967/4204196‑4204126 AATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGA > 2:4325338/1‑72AATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGA > 1:963933/1‑72AATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGA > 1:3745376/1‑72 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTTATTTGCCACTTTGCAGGTTTGAC < 2:8995628/72‑1 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTNAC > 2:750879/1‑72 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGAC < 1:9107245/72‑1 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGAC > 2:3668228/1‑72 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGAC > 1:7734709/1‑72 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGAC < 1:6172124/72‑1 ATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGNTTGAC < 1:867884/72‑1 TAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACC < 1:3022917/72‑1 TAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACC > 1:5988974/1‑72 TAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACC > 2:4265638/1‑72 AGCAGGGCTTCAGAAACCNCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACCA < 1:3077777/72‑1 AGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACCA > 2:6040014/1‑72 AGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACCA > 1:3789136/1‑72 CAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACCACT < 1:706649/72‑1 CACGATAATCTGATTTGCCACTTTGCAGGTTTGACCACTGCCGCACCGTAACGACGCAAGAGCTT > 2:2929114/1‑65 CACGATAATCTGATTTGCCACTTTGCAGGTTTGACCACTGCCGCACCGTAACGACGCAAGAGCTT < 1:2929115/65‑1 cccCCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCG < 2:5008657/69‑1 ACCCCTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAG < 2:7436649/72‑1 ACCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAG > 2:8971088/1‑72 ACCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAG < 2:419565/72‑1 ACCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCACTCTTTCATCGAG > 1:1636036/1‑72 CCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGA < 2:6334453/72‑1 CCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGA > 2:5861730/1‑72 CCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGA < 2:6153163/72‑1 CCACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCCTTCATCGAGA > 2:3902958/1‑72 CCACTGCCGCACCGTAACGACGCAAGAGCNTCGCGTGATGGATAAAGGCGTCGACGCCCTCCTTCGTCGcgc > 2:786816/1‑69 CACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGCGAT > 1:6632922/1‑72 CACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGAT > 1:2268147/1‑72 CACTGCCGACCCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGAT < 2:2375971/72‑1 ACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGATA > 1:7556901/1‑72 ACTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGATA > 1:4518271/1‑72 AATAGCAGGGCTTCAGAAACCGCTTCAATATTGAGCGCCACGATAATCTGATTTGCCACTTTGCAGGTTTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/509317‑509243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaCTGCCGCACCGTAACGACGCAAGAGCTTCGCGTGATGGATAAAGGCGTCGACGCCCTCTTTCATCGAGATA < NC_012967/4204196‑4204126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |