| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 509243 = | 243 (0.960) | 3 (0.010) | 3/134 | 16.1 | 1.3% | coding (492/879 nt) | glxR | 2‑hydroxy‑3‑oxopropionate reductase |
| ? | NC_012967 | = 4204196 | 237 (0.990) | coding (1438/3684 nt) | metH | methionine synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 247 total aligned reads displayed.
GTATTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCTGCT > NC_012967/509172‑509314 | gTATTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAAt < 1:9173202/72‑1 (MQ=255)gTATTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGAAAt < 1:340919/72‑1 (MQ=255) aTTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATgg < 1:8249101/72‑1 (MQ=255) aTTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATgg < 1:2170636/72‑1 (MQ=255) aTTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATgg > 1:8103623/1‑72 (MQ=255) tttGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGt < 2:8658520/72‑1 (MQ=255) tttGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGt < 2:8609146/72‑1 (MQ=255) tttGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGt > 2:7591076/1‑72 (MQ=255) tttGAAACTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGt < 2:653539/72‑1 (MQ=255) tGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCTGCGTGGGCGGTAACGGCAATGGTCa < 2:1994482/72‑1 (MQ=255) tGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCa > 1:6249219/1‑72 (MQ=255) gAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAGTGGTCaa < 1:1207057/72‑1 (MQ=255) aaCGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCaaa > 2:8172176/1‑72 (MQ=255) aCGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAAc > 2:656980/1‑72 (MQ=255) aCGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAAc < 1:5630064/72‑1 (MQ=255) aCGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAAc > 1:2047740/1‑72 (MQ=255) cGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAAcc < 1:1104242/72‑1 (MQ=255) gttttAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCt < 2:2061328/69‑1 (MQ=255) gtgtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCt < 1:3334591/72‑1 (MQ=255) gtgtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCt < 1:6642647/72‑1 (MQ=255) gtgtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCt > 2:505126/1‑72 (MQ=255) tgtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTg < 1:584384/72‑1 (MQ=255) gtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGc < 1:3808154/72‑1 (MQ=255) gtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGc < 2:5969776/72‑1 (MQ=255) gtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGc > 2:7739706/1‑72 (MQ=255) gtTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGc < 2:6943470/72‑1 (MQ=255) tAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCaa < 2:8845292/72‑1 (MQ=255) aaCCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAg > 2:5089685/1‑72 (MQ=255) aaCCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAg > 2:2097749/1‑72 (MQ=255) aaCCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAg < 1:8581346/72‑1 (MQ=255) aCCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGt < 1:8005991/72‑1 (MQ=255) aCCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGt < 2:7875423/72‑1 (MQ=255) ccGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTg > 2:1695806/1‑72 (MQ=255) gCTGTTTGAACTGCTCGGTAAAAATCTCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCACAGTGGc > 1:4777540/1‑72 (MQ=255) gCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGc < 2:5613012/72‑1 (MQ=255) cTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCa > 2:5905427/1‑72 (MQ=255) gTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCaaa < 2:899236/72‑1 (MQ=255) ttGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATc < 1:5457999/72‑1 (MQ=255) tGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCa > 2:3573293/1‑72 (MQ=255) aaCTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGa < 1:402127/72‑1 (MQ=255) aaCTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGa < 2:234577/72‑1 (MQ=255) aaCTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGa > 2:1666710/1‑72 (MQ=255) aCTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGAt > 1:7227476/1‑72 (MQ=255) cTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGAtt < 2:2946287/72‑1 (MQ=255) cTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGAtt > 2:2456796/1‑72 (MQ=255) cTGCTCGGTAAAAATATCACCCNCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGAtt < 1:2553466/72‑1 (MQ=255) tGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTa > 1:8832374/1‑72 (MQ=255) gCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTAt > 1:6504589/1‑72 (MQ=255) gCTCGGTAAAAANATCGCCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTAt < 1:988282/72‑1 (MQ=255) cTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATc > 2:3940215/1‑72 (MQ=255) cTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATc < 1:1959932/72‑1 (MQ=255) cGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGt < 2:2777308/72‑1 (MQ=255) tAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCACAGTGGCAAATCAGATTATCGTGgc > 2:3618978/1‑72 (MQ=255) tAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGgc < 1:3732340/72‑1 (MQ=255) aaaaaTATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGgcg < 2:4594926/72‑1 (MQ=255) aaaaTATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGgcgc > 1:5098300/1‑72 (MQ=255) aaaTATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCt < 1:7565334/72‑1 (MQ=255) aaTATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTc > 1:1345776/1‑72 (MQ=255) atatCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCa > 1:4444281/1‑72 (MQ=255) atatCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCa > 2:4337448/1‑72 (MQ=255) tatCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCaa < 2:7476300/72‑1 (MQ=255) tatCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCaa < 1:175038/72‑1 (MQ=255) tatCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCaa > 1:4006589/1‑72 (MQ=255) atCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAat < 1:8946754/72‑1 (MQ=255) tCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAata < 1:6734579/72‑1 (MQ=255) tCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAata < 1:2750748/72‑1 (MQ=255) cACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAatat > 2:1290281/1‑72 (MQ=255) cACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAatat > 2:5352852/1‑72 (MQ=255) cACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAatat < 1:8907297/72‑1 (MQ=255) aCCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATAtt < 1:6129509/72‑1 (MQ=255) ccTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGa < 1:2372791/72‑1 (MQ=255) cTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGaa < 2:2687351/72‑1 (MQ=255) tCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAg < 1:6937445/72‑1 (MQ=255) cGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGc > 2:6060067/1‑72 (MQ=255) cGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGc < 2:8466012/72‑1 (MQ=255) ggCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATACTGCAGCGGtt > 2:3238515/1‑72 (MQ=255) gCGGTTACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGttt < 2:3103130/72‑1 (MQ=255) gCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGttt > 1:71334/1‑72 (MQ=255) gCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGttt > 2:4679306/1‑72 (MQ=255) gCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGttt < 1:1562727/72‑1 (MQ=255) gCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGttt < 2:7046848/72‑1 (MQ=255) cGGTAACGGCAATTGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTc < 2:5438193/72‑1 (MQ=255) cGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTc < 1:5249555/72‑1 (MQ=255) ggTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCt < 1:7651893/72‑1 (MQ=255) ggTAACGGCAATGGTCAAACCTCCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCt > 1:4325679/1‑72 (MQ=255) gTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCTGGGCGCTCAATATTGAAGCGGTTTCTg < 2:314688/72‑1 (MQ=255) gTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTg < 1:3608969/72‑1 (MQ=255) gTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTg > 1:853833/1‑72 (MQ=255) tAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGa < 1:7768748/72‑1 (MQ=255) tAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGa > 1:7983718/1‑72 (MQ=255) aaCGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAANATTGAAGCGGTTTCTGaa > 1:3559118/1‑72 (MQ=255) aCGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAg < 1:2789603/72‑1 (MQ=255) cGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGc < 1:4894485/72‑1 (MQ=255) ggCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGcc < 2:260436/72‑1 (MQ=255) ggCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGcc < 2:7642451/72‑1 (MQ=255) gCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGccc > 2:7926601/1‑72 (MQ=255) cAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCt < 2:5251567/72‑1 (MQ=255) agtGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCTg > 1:706649/3‑72 (MQ=255) aaTGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCTg < 1:221067/72‑1 (MQ=255) tGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGNGGTTTCTGAAGCCCTGCt > 1:3077777/1‑72 (MQ=255) | GTATTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCAATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCTGCT > NC_012967/509172‑509314 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |