| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP002094 | = 1321880 | 56 (0.560) | 4 (0.050) | 4/148 | 11.2 | 7.8% | intergenic (‑192/+485) | LLNZ_06960/LLNZ_06965 | xanthine phosphoribosyltransferase/hypothetical protein |
| ? | CP002094 | 1381355 = | 53 (0.710) | intergenic (‑458/+78) | LLNZ_07275/LLNZ_07280 | hypothetical protein/guanosine 5'‑monophosphate oxidoreductase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAAGACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAAGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP002094/1321760‑1321880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catattctaggtataaataagattGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCATTC > CP002094/1381355‑1381451 CAAGACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCA < 2:1209806/99‑1CAAGACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCA > 2:1251970/1‑99CAAGACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCA < 2:345772/99‑1 AGACGTTTCAAATTCGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGTTAGAAACGCCCAGCCATA < 2:1210305/99‑1 AGACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATA < 2:1534008/99‑1 GACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATAT > 2:1616659/1‑99 GACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATAT > 2:768657/1‑99 ACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATT > 1:413311/1‑99 ACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATT > 2:1223250/1‑99 CGTTTCAAATCCGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTGCCTTATTGTCTCGAATTTACGGTACGAGGTAGAAACGCCCAGCCATATTC < 2:709508/99‑1 CGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTC > 1:280762/1‑99 CGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTC > 2:827450/1‑99 TTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTA > 1:1337390/1‑99 TTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTA > 1:1536887/1‑99 TTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTA > 2:1526191/1‑99 AAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTA < 2:34026/99‑1 ATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATA > 1:527823/1‑99 TACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAA > 1:1311968/1‑99 TACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAA > 1:1121179/1‑99 TACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCACAGCCATATTCTAGGTATAA > 2:988598/1‑99 CGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAAT > 1:560135/1‑99 CAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAA > 2:431768/1‑99 AAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAAGA > 2:1477737/1‑99 TAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAAGATTGTTCTATT < 1:14998/99‑1 AATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACT > 2:426805/1‑99 ATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTG < 2:1363382/99‑1 CGCCCAGCCATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAA < 2:103237/99‑1 CATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGC > 1:1078839/1‑99 CATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGC > 2:905795/1‑99 CATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGC < 2:570626/99‑1 ATATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCT > 2:308659/1‑99 TATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTT > 2:917979/1‑99 TATTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCAAACAATGGGAAAGAAAATGCTT > 1:1494384/1‑99 TTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTAC > 1:1543352/1‑99 TTCTAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTAC < 1:1593230/99‑1 TAGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAA > 1:641195/1‑99 AGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAA < 2:411035/99‑1 AGGTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAA > 2:140045/1‑99 GTATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATA > 1:1192792/1‑99 TATAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAG > 2:1242144/1‑99 TAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCA < 2:164032/99‑1 TAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCA > 1:1271837/1‑99 TAAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCA < 2:1601143/99‑1 AAATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCAT < 2:1236294/99‑1 ATAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCA > 1:1329853/1‑99 TAAGATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCAC > 2:598489/1‑99 GATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCAT > 2:1420085/1‑99 GATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCAT < 2:670305/99‑1 ATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCATT < 2:1601368/99‑1 ATTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCATT > 2:909345/1‑99 TTGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCATTC > 1:776289/1‑99 CAAGACGTTTCAAATACGCAAAAAAGAAATTAAATTTACTGAAAAATCGAATTTCCTTATTGTCTCGCATTTACGGTACGAGGTAGAAACGCCCAGCCATATTCTAGGTATAAATAAGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP002094/1321760‑1321880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catattctaggtataaataagattGTTCTATTATAGACTAAATACTAAAGTTTTTCAAGCATAAGTTTTGGTATTCCCGAACAATGGGAAAGAAAATGCTTACTAAATAGCATCACCATTC > CP002094/1381355‑1381451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |