BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002094	= 25978	132 (1.320)	9 (0.090) +TA	7/192	11.4	6.6%	intergenic (+2/‑10)	LLNZ_t13263/LLNZ_t13265	tRNA‑Phe/tRNA‑Gly
*	?	CP002094	= 2500912	127 (1.270)	9 (0.090) +TA	7/192	11.4	6.6%	intergenic (‑1/+35)	LLNZ_t13375/LLNZ_t13377	tRNA‑Tyr/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 133 total aligned reads displayed.

TCAAATCCTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAACTTAATATTTTGG  >  CP002094/25880‑26074

  aaaTCCTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑Tcc                                                                                                 <  2:1032653/99‑1 (MQ=255)

  aaaTCCTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑Tcc                                                                                                 <  1:1470820/99‑1 (MQ=255)

   aaTCCTAATCGCGCAATTAAAGGCTCGGTAGAGCAGGTGGTGGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCt                                                                                                <  1:365366/99‑1 (MQ=17)

    aTCCTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCtt                                                                                               <  1:1014526/99‑1 (MQ=255)

      ccTATTCCCGCAATTAAAGGCTCGGTAGCTCCGATGGTAGAGTAATGGATTGAAGCCCCATGTGACGGC‑GGATCGCTTTCGTGTCGGGCCGT‑Tccgtca                                                                                             >  2:555446/1‑95 (MQ=255)

      ccTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTAt                                                                                             <  1:1060350/99‑1 (MQ=255)

      ccTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTAt                                                                                             <  1:102033/99‑1 (MQ=255)

       cTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTAtt                                                                                            <  2:798155/99‑1 (MQ=255)

       cTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTAtt                                                                                            <  2:1222987/99‑1 (MQ=255)

        tATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTTCGTCTCGCGCCAT‑TCCtttttt                                                                                           >  2:828500/1‑99 (MQ=255)

        tATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTAttt                                                                                           <  2:1150807/99‑1 (MQ=255)

         aTTCGCGCAATTAAAGGCTCGGTAGCTCAGTTGTTAGAGCAATAGATTTAAGCACCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTa                                                                                          <  2:842557/99‑1 (MQ=17)

              cGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGa                                                                                     <  1:1662022/99‑1 (MQ=255)

                 aaTTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGt                                                                                  >  2:509021/1‑99 (MQ=255)

                  aTTAACGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTa                                                                                 <  2:1454052/99‑1 (MQ=255)

                   ttAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAg                                                                                <  1:1402499/99‑1 (MQ=255)

                     aaaGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGtt                                                                              <  2:74525/99‑1 (MQ=255)

                     aaaGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGtt                                                                              <  1:440682/99‑1 (MQ=255)

                      aaGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGCGGGTTTGTTTCGTCCTCGCGCCCT‑CCTTTTTTTATCGGGGGTAGtt                                                                              >  1:81778/1‑99 (MQ=2)

                      aaGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGttt                                                                             <  2:379354/99‑1 (MQ=255)

                      aaGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGgtt                                                                             >  2:1333079/1‑99 (MQ=255)

                       aGGCTCGGTGGCTCAGTTGGTAGAGCGATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTa                                                                            <  1:740428/99‑1 (MQ=255)

                       aGGCTCGGTATCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTa                                                                            <  2:30390/99‑1 (MQ=255)

                        ggCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCTTGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTaa                                                                           <  1:1653563/99‑1 (MQ=255)

                        ggCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTTGCGGATGTAGTTTaa                                                                           >  2:150274/1‑99 (MQ=255)

                         gCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAAt                                                                          <  2:964586/99‑1 (MQ=255)

                         gCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAAt                                                                          >  2:1580173/1‑99 (MQ=255)

                         gCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAAt                                                                          <  2:317959/99‑1 (MQ=255)

                         gCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGGTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGGAGTTTAAt                                                                          >  2:1245712/1‑99 (MQ=255)

                          cgcGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GTTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATg                                                                         <  1:1157587/97‑1 (MQ=255)

                           tCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATgg                                                                        <  2:1390005/99‑1 (MQ=255)

                            cGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGt                                                                       <  1:858655/99‑1 (MQ=255)

                             ggTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGGTGTAGTTTAATGGTa                                                                      >  1:637515/1‑99 (MQ=255)

                             ggTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTa                                                                      <  2:241846/99‑1 (MQ=255)

                              gTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCCT‑TCCTTATTTAGCGGGTGTAGTTTAATGGGAg                                                                     >  2:1149474/1‑99 (MQ=255)

                              gTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAg                                                                     >  2:589440/1‑99 (MQ=255)

                                 gCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AAc                                                                 <  2:309885/99‑1 (MQ=255)

                                 gCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCCCGCCCT‑TCCTTATTTTGCGGGTGTAGTTTTATGGTAG‑aaa                                                                 >  1:1577612/1‑98 (MQ=14)

                                  cTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTTATGGTAG‑AAcc                                                                <  2:1260966/99‑1 (MQ=255)

                                  cTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AAcc                                                                <  2:241256/99‑1 (MQ=255)

                                  cTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AAcc                                                                <  1:126142/99‑1 (MQ=255)

                                     aGTCGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCCCGCGCCCTATCTGTATTCTGCGGGTATAGTTTAGTGGTAA‑AAccac                                                              >  2:648279/1‑97 (MQ=2)

                                      gTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCaa                                                            >  2:1282791/1‑98 (MQ=255)

                                         ggTAGAGCAATGGATTGAAGCTCCATGTGCCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCt                                                         <  2:582800/99‑1 (MQ=255)

                                          gTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCtt                                                        <  2:424558/99‑1 (MQ=255)

                                          gTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCtt                                                        <  1:548859/99‑1 (MQ=255)

                                          gTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCCCGCGCCATATCTGTATTCTGCGGGTATAGTTTAGTGGTAA‑AACCACAGCCt                                                         >  2:777661/1‑99 (MQ=11)

                                           tAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTc                                                       <  2:38400/99‑1 (MQ=255)

                                           tAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCCCGCGCCATATCTGTATTCTGCGGGTATAGTTTAGTGGTAA‑AACCACAGCCtt                                                        <  2:898368/99‑1 (MQ=2)

                                            agagCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTcc                                                      <  2:1075907/99‑1 (MQ=255)

                                             gagCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCCGTTCCGTCTCGCGCCAT‑TCCTTATTTTGAGGGTGTAGTTTAATGGTAG‑AACCCCCGCGTTCCa                                                     >  1:900798/1‑99 (MQ=14)

                                              agCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCaa                                                    >  2:67828/1‑99 (MQ=255)

                                                    ggATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGc                                              <  2:56876/99‑1 (MQ=255)

                                                     gATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCt                                             >  2:1397533/1‑99 (MQ=255)

                                                     gATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCt                                             >  2:234825/1‑99 (MQ=255)

                                                     gATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCCCGCGCCATATCTGTATTCTGCGGGTATAGTTTAGTGGTAA‑AACCACAGCCTTCCAAGCTgtt                                              >  2:1243207/1‑97 (MQ=2)

                                                      aTTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTa                                            <  1:106196/99‑1 (MQ=255)

                                                      aTTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTa                                            <  2:861772/99‑1 (MQ=255)

                                                      aTTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTCAGCGGATGTCGTTTAATGGTAG‑AACCCCCGCCTTCCAAGCTGGCTa                                            >  2:180287/1‑99 (MQ=255)

                                                       ttGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑GACCCCAGCCTTCCAAGCTGGCTAc                                           >  2:1118586/1‑99 (MQ=255)

                                                       ttGAAGCTCCATGTGTCGGC‑GGGTCGATTCCCTCTCGCGCCGT‑TCCTTAATTATCCGAGGTAGTTTGACTGGAG‑ACACCCCGCCTTCCAAGCTTGCTaa                                           >  2:46355/1‑98 (MQ=9)

                                                          aaGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTAcgcg                                        >  2:1484749/1‑99 (MQ=255)

                                                          aaGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTAcgcg                                        >  2:1395117/1‑99 (MQ=255)

                                                             cTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCCGCCTTCCAAGCTGGCTACGCGGGt                                     >  2:437788/1‑99 (MQ=255)

                                                             cTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGt                                     <  2:933353/99‑1 (MQ=255)

                                                              tCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGtt                                    <  1:1527729/99‑1 (MQ=255)

                                                               ccATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTc                                   <  2:628426/99‑1 (MQ=255)

                                                                 aTGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGa                                 <  2:1527585/99‑1 (MQ=255)

                                                                  tgtgTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTTGCGGGTGTAGTTTTATGGTAG‑AAACCCAGCCTTTCCAGCTGGCTACGCGGGGTCggt                                >  1:669616/1‑97 (MQ=14)

                                                                  tgtgTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGGTGTAGGTTTATTGTAGAAACCCCACCCTTCC‑AGCCGGCTACCCGAGGTCggt                                >  1:934644/1‑97 (MQ=14)

                                                                  tgtgTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGAt                                >  1:640114/1‑99 (MQ=255)

                                                                   gtgtCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGAtt                               <  1:216711/99‑1 (MQ=255)

                                                                    tgtCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATtc                              >  2:1485634/1‑99 (MQ=255)

                                                                     gtCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATtct                             <  2:828875/99‑1 (MQ=255)

                                                                     gtCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATtct                             <  1:831421/99‑1 (MQ=255)

                                                                        gcc‑ggTTCGATTCCGTCCCGCGCCATATCTGTATTCTGCGGGTATAGTTTAGTGGTAA‑AACCACAGCCTTCCAAGCTGTTGTCGCGAGTCCGATTCTCg                           <  1:1210393/97‑1 (MQ=2)

                                                                         gc‑ggTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGa                                                                                     <  1:43868/40‑1 (MQ=255)

                                                                         gc‑ggTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGa                                                                                     >  2:43868/1‑40 (MQ=255)

                                                                          c‑ggTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCa                        <  2:1322080/99‑1 (MQ=255)

                                                                          c‑ggTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCa                        >  2:539237/1‑99 (MQ=255)

                                                                            ggTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCAt                       <  1:1018269/99‑1 (MQ=255)

                                                                            ggTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCAt                       <  1:1018897/99‑1 (MQ=255)

                                                                            ggTTCGATTCCGTCCCGCGCCATATCTGTATTCTGCGGGTATAGTTTAGTGGTAA‑AACCACAGCCTTCCAAGCTGTTGTCGCGAGTCCGATTCTCGtta                        <  2:697587/99‑3 (MQ=2)

                                                                             gTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AGCCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATc                      <  2:936028/99‑1 (MQ=255)

                                                                             gTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATc                      >  2:1567876/1‑99 (MQ=255)

                                                                             gTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATc                      >  2:902296/1‑99 (MQ=255)

                                                                             gTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATc                      <  2:1186830/99‑1 (MQ=255)

                                                                               tCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑ACCCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCg                    <  1:979566/99‑1 (MQ=255)

                                                                                cGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGc                   <  2:1177678/99‑1 (MQ=255)

                                                                                 taTTCCGTCTCGCGCCAT‑TCCTTATTTAGTGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGct                  <  2:1029145/98‑1 (MQ=255)

                                                                                 gATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGct                  <  1:221940/99‑1 (MQ=255)

                                                                                     ccGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGcttaac              <  2:776316/99‑1 (MQ=255)

                                                                                     ccGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGcttaac              <  1:663018/99‑1 (MQ=255)

                                                                                     ccGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGcttaac              <  1:353614/99‑1 (MQ=255)

                                                                                         ctcGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGcttaacttaa          <  1:35339/99‑1 (MQ=255)

                                                                                           ggctccAT‑TCCTTATTTAGCGGATGGAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAACTTAata        <  1:1189957/95‑1 (MQ=255)

                                                                                           cgcgCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAACTTAata        <  1:161380/99‑1 (MQ=255)

                                                                                            gcgcCAT‑GCCTTATTTAGCGGGTGTAGTTTATTGGTAG‑ACCCTTAGCCTTCTAAGCTGGCTACGCGGGGTCCATTCTCGTCACCCGCTTAACTTAatat       <  2:1525608/99‑1 (MQ=17)

                                                                                                 aT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAACTTAATATTTTgg  <  1:489386/99‑1 (MQ=255)

                                                                                                 aT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAACTTAATATTTTgg  >  2:670987/1‑99 (MQ=255)

TCAAATCCTATTCCCGCAATTAAAGGCTCGGTAGCTCAGTTGGTAGAGCAATGGATTGAAGCTCCATGTGTCGGC‑GGTTCGATTCCGTCTCGCGCCAT‑TCCTTATTTAGCGGATGTAGTTTAATGGTAG‑AACCCCAGCCTTCCAAGCTGGCTACGCGAGTTCGATTCTCGTCATCCGCTTAACTTAATATTTTGG  >  CP002094/25880‑26074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.