BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP002094	= 25978	132 (1.320)	9 (0.090) +TA	7/192	11.4	6.6%	intergenic (+2/‑10)	LLNZ_t13263/LLNZ_t13265	tRNA‑Phe/tRNA‑Gly
*	?	CP002094	= 2500912	127 (1.270)	9 (0.090) +TA	7/192	11.4	6.6%	intergenic (‑1/+35)	LLNZ_t13375/LLNZ_t13377	tRNA‑Tyr/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 127 total aligned reads displayed.

CAAGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGC  >  CP002094/2500816‑2501010

cAAGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCaaa                                                                                                     <  1:1144559/99‑1 (MQ=255)

cAAGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCCCTTCGCTACCCTTCCaaa                                                                                                     >  2:1396173/1‑99 (MQ=255)

  aGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCTTTCCaaatt                                                                                                   >  2:680367/1‑97 (MQ=255)

  aGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAAct                                                                                                   >  1:973501/1‑99 (MQ=255)

  aGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAAct                                                                                                   >  2:1452912/1‑99 (MQ=255)

   gTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAActc                                                                                                  >  2:764905/1‑99 (MQ=255)

    tataAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAActc‑t                                                                                                >  2:687851/1‑99 (MQ=255)

    tataAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAActc‑t                                                                                                >  2:419335/1‑99 (MQ=255)

         aaaaaaGGGAAGGGGAGGGATTCGACCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTAtt                                                                                           <  1:1447227/96‑1 (MQ=255)

         aaCAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTAtt                                                                                           <  1:359433/99‑1 (MQ=255)

         aaCAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTAtt                                                                                           <  1:1266269/99‑1 (MQ=255)

         aaCAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTAtt                                                                                           >  2:549310/1‑99 (MQ=255)

          aCAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAACCTC‑TTTATTc                                                                                          >  2:963067/1‑99 (MQ=255)

           cAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCa                                                                                         >  2:1513382/1‑99 (MQ=255)

             aaTGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAAt                                                                                       <  2:971794/99‑1 (MQ=255)

             aaTGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAAt                                                                                       <  2:294569/99‑1 (MQ=255)

              aTGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAAtt                                                                                      >  2:203226/1‑99 (MQ=255)

                ggAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTaa                                                                                    <  2:1610822/99‑1 (MQ=255)

                 gAAGGGGAGGGATTCGAACGCCCGAACCCGAAGAAGCGGATTTAATGTCCTCAGCGTTTTTTCTTTTTTTTTTCCTTCCAAATTA‑TTTATTTTATTAA‑t                                                                                  >  2:706132/1‑99 (MQ=255)

                  aaGGGGAGGGATCCGACCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑Tg                                                                                 <  1:662797/99‑1 (MQ=255)

                   aGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑Tgg                                                                                >  2:1477435/1‑99 (MQ=255)

                   aGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑Tgg                                                                                >  2:580072/1‑99 (MQ=255)

                   aGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑Tgg                                                                                <  2:928069/99‑1 (MQ=255)

                    ggggAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGc                                                                               <  2:1459224/99‑1 (MQ=255)

                    cgggagggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTTCCCTTCCAAACTC‑TTTATTCAATTAA‑TGGc                                                                               <  1:510037/98‑1 (MQ=255)

                     gggagggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCt                                                                              >  2:1250908/1‑99 (MQ=255)

                     gggagggaTCCGACCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCt                                                                              <  1:190587/99‑1 (MQ=255)

                      ggagggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTg                                                                             >  1:421122/1‑99 (MQ=255)

                        agggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGaa                                                                           >  1:1451404/1‑99 (MQ=255)

                         gggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGaaa                                                                          >  2:109281/1‑99 (MQ=255)

                          ggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAaac                                                                         >  2:1577364/1‑99 (MQ=255)

                          ggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAaac                                                                         >  1:1047541/1‑99 (MQ=255)

                          ggaTTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAaac                                                                         <  1:1167057/99‑1 (MQ=255)

                             ttCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAaacaac                                                                      >  2:846535/1‑99 (MQ=255)

                                gAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTTCCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCaa                                                                   <  2:279917/99‑1 (MQ=255)

                                gAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCaa                                                                   <  1:1027760/99‑1 (MQ=255)

                                gAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCaa                                                                   >  2:249292/1‑99 (MQ=255)

                                gAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCaa                                                                   >  2:383424/1‑99 (MQ=255)

                                 aaCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑t                                                                 >  1:886901/1‑99 (MQ=255)

                                 aaCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑t                                                                 >  2:1603326/1‑99 (MQ=255)

                                 aaCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑t                                                                 <  2:172318/99‑1 (MQ=255)

                                 aaCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑t                                                                 >  1:216146/1‑99 (MQ=255)

                                  aCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑Tg                                                                >  1:1197242/1‑99 (MQ=255)

                                  aCCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGGTTTACCTCTTCCCTCCCCCTCCCAACCCTTTTTTTCAATAAT‑GGGTTGAAAAAACAAA‑t                                                                 >  1:1178951/1‑99 (MQ=255)

                                      ccgaacccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAg                                                            <  2:1612972/99‑1 (MQ=255)

                                       cgaagccgagGGTGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGt                                                           <  2:690042/99‑1 (MQ=255)

                                       cgaacccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGt                                                           <  2:157196/99‑1 (MQ=255)

                                       cgaacccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGt                                                           >  1:1084194/1‑99 (MQ=255)

                                        gaacccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGtt                                                          <  2:432458/99‑1 (MQ=255)

                                         aacccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGGTa                                                         >  1:1178349/1‑99 (MQ=255)

                                          acccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTaa                                                        <  2:1538350/99‑1 (MQ=255)

                                          acccgaaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTaa                                                        <  1:1542226/99‑1 (MQ=255)

                                               aaGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGa                                                   >  1:945024/1‑99 (MQ=255)

                                                aGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGAt                                                  <  2:1270133/99‑1 (MQ=255)

                                                 ggAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATc                                                 <  2:155043/99‑1 (MQ=255)

                                                  gAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGGTAACGGGATCg                                                >  2:602568/1‑99 (MQ=255)

                                                    gCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGaa                                              <  2:747980/99‑1 (MQ=255)

                                                    gCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGaa                                              <  1:180719/99‑1 (MQ=255)

                                                    gCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGaa                                              >  1:1364112/1‑99 (MQ=255)

                                                       gATTTACAGTCCGCCGCGGTTTACCTCTTCCCTTCCCTTTCCAAATC‑TTTTTTCAAATAATTGGCT‑AAACAAACAATTGGGAG‑TAACGGGGACGCACCg                                           >  1:1483196/1‑99 (MQ=255)

                                                        aTTTGCAGTCCGCCGCGTTTAGCCTCTTCGCTGCCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGc                                          <  2:146079/99‑1 (MQ=255)

                                                        aTTTACAGTCTGCCGAGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGc                                          <  1:728122/99‑1 (MQ=255)

                                                          ttACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTg                                        >  2:1521633/1‑99 (MQ=255)

                                                            aCAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGAc                                      >  1:1393677/1‑99 (MQ=255)

                                                             cAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGAcc                                     >  2:1335377/1‑99 (MQ=255)

                                                               gTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCct                                   <  2:303879/99‑1 (MQ=255)

                                                               gTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCct                                   >  2:1409054/1‑99 (MQ=255)

                                                                tCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATTGAACCGCTGACCctc                                  <  1:1438300/99‑1 (MQ=255)

                                                                tCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCctc                                  <  2:1660510/99‑1 (MQ=255)

                                                                  cgccgcGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTg                                <  1:133690/99‑1 (MQ=255)

                                                                   gccgcGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTTTGc                               >  1:1587576/1‑99 (MQ=255)

                                                                       cgTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGt                           >  1:525771/1‑99 (MQ=255)

                                                                       cgTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGt                           >  1:412185/1‑99 (MQ=255)

                                                                         tttAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTaa                         >  1:337878/1‑99 (MQ=255)

                                                                         tttAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTaa                         <  1:718063/99‑1 (MQ=255)

                                                                         tttAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTaa                         <  2:1271851/99‑1 (MQ=255)

                                                                           tAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAgg                       <  1:698582/99‑1 (MQ=255)

                                                                           tAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAgg                       <  2:526326/99‑1 (MQ=255)

                                                                              ccTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAg                    >  1:83565/1‑99 (MQ=255)

                                                                              ccTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAg                    >  2:384087/1‑99 (MQ=255)

                                                                               ctctTCGCTCCCCTTCCAAGCTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGa                   <  1:1264380/99‑1 (MQ=255)

                                                                               ctctTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGa                   <  2:1328308/99‑1 (MQ=255)

                                                                               ctctTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGa                   >  2:1420628/1‑99 (MQ=255)

                                                                                tctTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGAt                  <  1:282116/99‑1 (MQ=255)

                                                                                  ttCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGc                <  1:1452912/99‑1 (MQ=255)

                                                                                  ttCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGc                <  1:963067/99‑1 (MQ=255)

                                                                                  ttCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGc                <  1:1602487/99‑1 (MQ=255)

                                                                                     gCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTAACCCTCTGCTTGTAAGGCAGATGctct             <  2:1271486/99‑1 (MQ=255)

                                                                                      cTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCtctc            <  2:1166733/99‑1 (MQ=255)

                                                                                      cTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCtctc            >  1:1314087/1‑99 (MQ=255)

                                                                                       tACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTcc           <  1:22531/99‑1 (MQ=255)

                                                                                       tACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGATGAAACAACCAA‑TGGGAGCTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCCGATGCTATcc           >  2:1324466/1‑99 (MQ=14)

                                                                                        aCCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTccc          <  1:1302834/99‑1 (MQ=255)

                                                                                         cccTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCa         >  2:138891/1‑99 (MQ=255)

                                                                                           cTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGc       >  1:853161/1‑99 (MQ=255)

                                                                                           cTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGc       >  2:132762/1‑99 (MQ=255)

                                                                                           cTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGc       <  1:583464/99‑1 (MQ=255)

                                                                                           cTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGc       <  2:1491347/99‑1 (MQ=255)

                                                                                            ttCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCt      >  2:1224949/1‑99 (MQ=40)

                                                                                                aaaCTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGc  <  2:1579679/99‑1 (MQ=35)

CAAGTATAAAACAAATGGAAGGGGAGGGATTCGAACCCCCGAACCCGAAGGAGCGGATTTACAGTCCGCCGCGTTTAGCCTCTTCGCTACCCTTCCAAACTC‑TTTATTCAATTAA‑TGGCTGAAACAACCAA‑TGGGAGTTAACGGGATCGAACCGCTGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGC  >  CP002094/2500816‑2501010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.