Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | CP002094 | 308,346 | (AGC)3→2 | coding (412‑414/1080 nt) | LLNZ_01685 ← | multidrug‑efflux transporter protein |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | CP002094 | 308339 | 308341 | 3 | 110 [1] | [0] 113 | LLNZ_01685 | multidrug‑efflux transporter protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP002094 | 308342 = | 0 (0.000) | 104 (1.120) | 68/182 | 0.2 | 100% | coding (418/1080 nt) | LLNZ_01685 | multidrug‑efflux transporter protein |
? | CP002094 | = 308338 | 0 (0.000) | coding (422/1080 nt) | LLNZ_01685 | multidrug‑efflux transporter protein |
Only 100 of 113 total aligned reads displayed.
AGGGAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTTGGGCCAGAAATTGTTCCAACACCAACAGCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGCCAT > CP002094/308245‑308440 | gcaagggagatgattgctccaaagtagaaggggactgaatttccaaaatgggctagggctccaccaacggttgggccagaaattgttccaacacgaaca > 2:292733‑M1/98‑99 (MQ=255) caagggagatgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaacag < 1:550820‑M1/3‑1 (MQ=255) gggagatgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaacagcag < 2:750308‑M1/6‑1 (MQ=255) ggagatgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCagcagc > 1:939222‑M1/93‑99 (MQ=255) ggagatgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCagcagc < 1:1344501‑M1/7‑1 (MQ=255) gatgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttctaacacgaaCAGCAGCTGt > 1:578121‑M1/90‑99 (MQ=255) gatgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGt < 2:632302‑M1/10‑1 (MQ=255) atgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTc > 1:387910‑M1/89‑99 (MQ=255) tgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTcc < 1:1155475‑M1/12‑1 (MQ=255) tgattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTcc < 2:817394‑M1/12‑1 (MQ=255) gattgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCa > 1:908530‑M1/87‑99 (MQ=255) attgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCAt > 1:899413‑M1/86‑99 (MQ=255) attgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCAt < 1:635289‑M1/14‑1 (MQ=255) ttgctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATc > 2:1296835‑M1/85‑99 (MQ=255) ctccaaagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGa > 2:272612‑M1/82‑99 (MQ=255) agaaagagggggcctaattttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACt > 1:72995‑M1/77‑99 (MQ=255) aagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACt > 1:792611‑M1/77‑99 (MQ=255) aagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACt < 1:232448‑M1/23‑1 (MQ=255) aagtagaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACt < 2:1149695‑M1/23‑1 (MQ=255) agaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTg > 2:1609747‑M1/73‑99 (MQ=255) agaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTg > 2:407379‑M1/73‑99 (MQ=255) gaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGt < 2:1643313‑M1/28‑1 (MQ=255) gaaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGt < 1:860313‑M1/28‑1 (MQ=255) aaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGtt < 2:948955‑M1/29‑1 (MQ=255) aaggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGtt > 1:1590723‑M1/71‑99 (MQ=255) aggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTc < 1:638115‑M1/30‑1 (MQ=255) aggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTc < 1:1528989‑M1/30‑1 (MQ=255) aggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTc > 2:1164280‑M1/70‑99 (MQ=255) ggggactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCg < 2:233363‑M1/31‑1 (MQ=255) gactgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGAtt > 1:721769‑M1/66‑99 (MQ=255) actgaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGAttt > 1:1300791‑M1/65‑99 (MQ=255) actgaatttccaaaatgggctaggaggccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGAttt > 1:1077109‑M1/65‑99 (MQ=255) gaatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTttct > 2:371928‑M1/62‑99 (MQ=255) aatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCCGCAGTTGTCCATCCGAATACTTTTGTTCGATTttctt < 2:1221501‑M1/39‑1 (MQ=255) aatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTttctt < 2:163671‑M1/39‑1 (MQ=255) aatttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTttctt < 1:1563224‑M1/39‑1 (MQ=255) aatttccaaaatgggctaggagtccaccaacggtggggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAGTACTTTTGTTcgattttatt < 2:522960‑M1/39‑4 (MQ=255) atttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTttcttc < 1:643716‑M1/40‑1 (MQ=255) atttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTttcttc < 1:1413906‑M1/40‑1 (MQ=255) atttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTttcttc > 2:1542907‑M1/60‑99 (MQ=255) atttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGATGTCCATCCGAATACTTTTGTTCGATTttcttc > 1:750308‑M1/60‑99 (MQ=255) tttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTtca > 2:57073‑M1/59‑99 (MQ=255) ttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccagcacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTtcat > 1:634290‑M1/58‑99 (MQ=255) ttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTtcat > 1:1094819‑M1/58‑99 (MQ=255) ttccaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTtcat > 1:242352‑M1/58‑99 (MQ=255) caaaatgggctaggagtcccccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAg > 1:558992‑M1/55‑99 (MQ=255) caaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAg > 1:1320857‑M1/55‑99 (MQ=255) caaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAg > 2:56780‑M1/55‑99 (MQ=255) aaaaatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATCCTTTTGTTCGATTTTCTTCATCAg > 2:683802‑M1/55‑99 (MQ=255) aatgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTaa > 2:1653741‑M1/52‑99 (MQ=255) atgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAat < 1:1183996‑M1/49‑1 (MQ=255) atgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAat > 2:593299‑M1/51‑99 (MQ=255) atgggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAat < 2:661938‑M1/49‑1 (MQ=255) gggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAatat > 2:1576195‑M1/49‑99 (MQ=255) gggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAatat > 1:1358015‑M1/49‑99 (MQ=255) ggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATc > 1:868682‑M1/48‑99 (MQ=255) ggctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATc < 2:1216436‑M1/52‑1 (MQ=255) ctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCgg < 2:1187446‑M1/54‑1 (MQ=255) ctaggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCgg > 2:364750‑M1/46‑99 (MQ=255) taggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGc < 1:668769‑M1/55‑1 (MQ=255) taggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGc < 1:1010864‑M1/55‑1 (MQ=255) ggagtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGa > 2:1590503‑M1/43‑99 (MQ=255) agtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGaaa > 2:1018967‑M1/41‑99 (MQ=255) gtccaccaacggttgggccagaaattgttccaacacgaaCAGCCGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCTGTGAAAt < 2:25825‑M1/60‑1 (MQ=255) gtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAAt < 2:1194617‑M1/60‑1 (MQ=255) gtccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAAt > 2:1512510‑M1/40‑99 (MQ=255) ccaccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATaa > 2:731681‑M1/38‑99 (MQ=255) ctccaccggttgggccataaattcttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAg > 2:1069313‑M1/37‑99 (MQ=255) caccaacggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCACCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAg > 1:529655‑M1/37‑99 (MQ=255) aacggttgggccagaaattggtccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGaa > 1:636913‑M1/33‑99 (MQ=255) acggttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGaaa < 1:1255676‑M1/68‑1 (MQ=255) gttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAgt > 2:138804‑M1/29‑99 (MQ=255) ttgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTACTATCGGCGAAATAAGCGAAAAgtg < 2:1019313‑M1/72‑1 (MQ=255) tgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAgtgt > 2:1458034‑M1/27‑99 (MQ=255) tgggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAgtgt > 2:397006‑M1/27‑99 (MQ=255) gggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTc > 2:1217109‑M1/26‑99 (MQ=255) gggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTc > 1:233363‑M1/26‑99 (MQ=255) gggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGAGTc < 1:239075‑M1/74‑1 (MQ=255) ggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTGATATCGGCGAAATAAGCGAAAAGTGTCa < 1:502796‑M1/75‑1 (MQ=255) ggccagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCa < 1:980374‑M1/75‑1 (MQ=255) cagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCgg > 1:703013‑M1/22‑75 (MQ=255) cagaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCgg < 2:703013‑M1/54‑1 (MQ=255) agaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGat < 2:757791‑M1/79‑1 (MQ=255) gaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGata > 1:835347‑M1/20‑99 (MQ=255) gaaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGata < 1:254216‑M1/80‑1 (MQ=255) aaattgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGatat > 2:1379975‑M1/19‑99 (MQ=255) attgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATGTCGGCGAAATAAGCGAAAAGTGTCACGATAttt < 1:366470‑M1/83‑1 (MQ=255) attgttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATAttt > 1:642184‑M1/17‑99 (MQ=255) gttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCa > 2:1358253‑M1/14‑99 (MQ=255) ttccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCAc > 1:1257329‑M1/13‑99 (MQ=255) tccaacacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCAcc < 2:577561‑M1/88‑1 (MQ=255) acacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGtt < 1:603171‑M1/92‑1 (MQ=255) acacgaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGAGTCCCGATATTTCCACCGGtt < 1:916588‑M1/92‑1 (MQ=255) gaaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGc > 2:1183996‑M1/4‑99 (MQ=255) aaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGcc < 1:1027587‑M1/97‑1 (MQ=255) aaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGcc > 1:451296‑M1/3‑99 (MQ=255) aaCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGcc < 2:153507‑M1/97‑1 (MQ=255) CAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGCCAt > 1:405247‑M1/1‑99 (MQ=255) CAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGCCAt < 2:537857‑M1/99‑1 (MQ=255) CAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGCCAt > 2:34082‑M1/1‑99 (MQ=255) | AGGGAGATGATTGCTCCAAAGTAGAAGGGGACTGAATTTCCAAAATGGGCTAGGAGTCCACCAACGGTTGGGCCAGAAATTGTTCCAACACCAACAGCAGCAGCTGTCCATCCGAATACTTTTGTTCGATTTTCTTCATCAGTAATATCGGCGAAATAAGCGAAAAGTGTCACGATATTTCCACCGGTTAAGCCAT > CP002094/308245‑308440 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |